| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is cut3 [H]
Identifier: 41410334
GI number: 41410334
Start: 4702851
End: 4703486
Strand: Reverse
Name: cut3 [H]
Synonym: MAP4236c
Alternate gene names: 41410334
Gene position: 4703486-4702851 (Counterclockwise)
Preceding gene: 41410335
Following gene: 41410325
Centisome position: 97.39
GC content: 68.71
Gene sequence:
>636_bases GTGAGGCTTATCCCTGTGGGGCTGGGCGTCGGGCTGCTCGCGGGCGCAGCGGTTTTGATTGCCCCCCAATTGATTCCGCT CGCGTCGGCATCGTGTCCGGGCGTTGAAGTGGTGTTCGCCCGGGGCACGGACGAGCCGCCCGGGGTTGGGAAGGTGGGCG GCGCGTTCGTCAGCTCGTTGCGTGAGCAGACCCGCAAAAGCGTTGGCGCATACGGGGTGAACTACCCGGCGAACAAGGAC TTCCTGGCCGCCGCGGACGGCGCCAACGACGCCAGCAACCACATCCAGCAGATGGCCGGCAACTGCCCGAACACCAAACT GGTGCTGGGCGGGTATTCGCAGGGCGCCGCCGTCATCGACATCGTCACCGCCGCACCGGTGCCGGGCCTGGGCTTTCGCA ACCCGTTGCCGCCGCAGGCCGCCGATCACGTCGCCGCCGTCGCCCTGTTCGGGAATCCGTCGGGCCGGGCCGGCCGCCTG ATGAGCGCCCTGACCCCGGATTTCAGCGGCAAGACCATCGACCTGTGCAACCCGGGCGACCCGATCTGCTCGGGCGGTTA CCAGTGGGCGTCGCACCTGAGCTATGTGCCCGGATTGACCAACCAGGCAGCCAGGTTCGTCGCCACCCGGGTCTAG
Upstream 100 bases:
>100_bases CACGGCGCCGGCCCCGGCCGTGCCGAGCACGCCGCCTTCGCAAGCACCTCTCGTCTGAATCGTTACCGGCCCGCGACCAA CGCGCCCCTAACATCGCTGT
Downstream 100 bases:
>100_bases CGCGAGCGCACGTCGCGGGTGATCAGGTTGCGCGCCGCCAGCTGGTCATCCGGCGGGTAGTCGACCCCGACCAGGGTCAG CCCGTGCGCCGGTGCGGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 211; Mature: 211
Protein sequence:
>211_residues MRLIPVGLGVGLLAGAAVLIAPQLIPLASASCPGVEVVFARGTDEPPGVGKVGGAFVSSLREQTRKSVGAYGVNYPANKD FLAAADGANDASNHIQQMAGNCPNTKLVLGGYSQGAAVIDIVTAAPVPGLGFRNPLPPQAADHVAAVALFGNPSGRAGRL MSALTPDFSGKTIDLCNPGDPICSGGYQWASHLSYVPGLTNQAARFVATRV
Sequences:
>Translated_211_residues MRLIPVGLGVGLLAGAAVLIAPQLIPLASASCPGVEVVFARGTDEPPGVGKVGGAFVSSLREQTRKSVGAYGVNYPANKD FLAAADGANDASNHIQQMAGNCPNTKLVLGGYSQGAAVIDIVTAAPVPGLGFRNPLPPQAADHVAAVALFGNPSGRAGRL MSALTPDFSGKTIDLCNPGDPICSGGYQWASHLSYVPGLTNQAARFVATRV >Mature_211_residues MRLIPVGLGVGLLAGAAVLIAPQLIPLASASCPGVEVVFARGTDEPPGVGKVGGAFVSSLREQTRKSVGAYGVNYPANKD FLAAADGANDASNHIQQMAGNCPNTKLVLGGYSQGAAVIDIVTAAPVPGLGFRNPLPPQAADHVAAVALFGNPSGRAGRL MSALTPDFSGKTIDLCNPGDPICSGGYQWASHLSYVPGLTNQAARFVATRV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Secreted (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cutinase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000675 - InterPro: IPR011150 [H]
Pfam domain/function: PF01083 Cutinase [H]
EC number: =3.1.1.74 [H]
Molecular weight: Translated: 21375; Mature: 21375
Theoretical pI: Translated: 8.32; Mature: 8.32
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00155 CUTINASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLIPVGLGVGLLAGAAVLIAPQLIPLASASCPGVEVVFARGTDEPPGVGKVGGAFVSSL CEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHH REQTRKSVGAYGVNYPANKDFLAAADGANDASNHIQQMAGNCPNTKLVLGGYSQGAAVID HHHHHHHHCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCEEEE IVTAAPVPGLGFRNPLPPQAADHVAAVALFGNPSGRAGRLMSALTPDFSGKTIDLCNPGD EEECCCCCCCCCCCCCCCCHHHHEEEEEEECCCCCCHHHHHHHHCCCCCCCEEECCCCCC PICSGGYQWASHLSYVPGLTNQAARFVATRV CCCCCCHHHHHHHHHCCCCCHHHHHHHHHCC >Mature Secondary Structure MRLIPVGLGVGLLAGAAVLIAPQLIPLASASCPGVEVVFARGTDEPPGVGKVGGAFVSSL CEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHH REQTRKSVGAYGVNYPANKDFLAAADGANDASNHIQQMAGNCPNTKLVLGGYSQGAAVID HHHHHHHHCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCEEEE IVTAAPVPGLGFRNPLPPQAADHVAAVALFGNPSGRAGRLMSALTPDFSGKTIDLCNPGD EEECCCCCCCCCCCCCCCCHHHHEEEEEEECCCCCCHHHHHHHHCCCCCCCEEECCCCCC PICSGGYQWASHLSYVPGLTNQAARFVATRV CCCCCCHHHHHHHHHCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]