Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41410307

Identifier: 41410307

GI number: 41410307

Start: 4679528

End: 4680175

Strand: Direct

Name: 41410307

Synonym: MAP4209

Alternate gene names: NA

Gene position: 4679528-4680175 (Clockwise)

Preceding gene: 41410306

Following gene: 41410308

Centisome position: 96.89

GC content: 65.74

Gene sequence:

>648_bases
ATGTCGCTGCCAGCGCTTGAGGACATCGGCGACCTCATCGACGGGGTCACCCGCATCGAGACCAGCCCCCGGGAGAAGGC
CACGCCGATCATCATGGACATGATGCGGTCGGTGTACCCGCACGACCAGGTCTTCGGGCAGTACTGCACCGTCAACGACT
ACATCGACTGTCCACCCGACGACTTGTTCGAGTATATGGCCGACACCCGCAGCCTGGAGGAGTGGACCTACAGCCTGCGC
GGGTTCACCCCCACCGACGAGCCCGGGCTGTGGCTGGCCCACGACCGGCTCGGTTCGGAAACCAAGATCTACACCCGCAC
CGTCGCCAACGCGCAGGCGCGGACCGTGGACTACCACTGCGCCTGGGACCAGGGCGACCACCTGTGGATGATCTACCTGA
TGCGCGTCGTCGACGCCCAGACTGTGCTCGACAAGCCGGGATCGGTTGTGCTGTGGACCAATTGCCATCACCCGTTCTAC
GACCACAACCCGTACCCGCAGACCGCGCCGCCGCAGCGCCCGGTGTGGGTGGGCGACTTCTGGGACATGTTCGGCGCCGG
CCATCTGCTGGAGCTGCGCAACCTCAAGGCGATCGCCGAATACCGCCATCGGCACGGCCTGCCGGTCACCCCGGTGTGGA
TGAGGTGA

Upstream 100 bases:

>100_bases
GCCGCCGACGAGATCCCGCCATTCGCCCCGTTTCTCACCACGTCGGCGGTCAAAGATGCTGCCGTCAAACAGAATTCAGT
TACAAAGGAGATCCGCACCA

Downstream 100 bases:

>100_bases
CGCGATGAACGCGTCAACCGTCAGCCTGATCGACGTCGCCAGCTATCTGCCGGGCGAGCCGATCCCCGCCGACTACTACG
CGCAATTCGCCGAATCCGAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 215; Mature: 214

Protein sequence:

>215_residues
MSLPALEDIGDLIDGVTRIETSPREKATPIIMDMMRSVYPHDQVFGQYCTVNDYIDCPPDDLFEYMADTRSLEEWTYSLR
GFTPTDEPGLWLAHDRLGSETKIYTRTVANAQARTVDYHCAWDQGDHLWMIYLMRVVDAQTVLDKPGSVVLWTNCHHPFY
DHNPYPQTAPPQRPVWVGDFWDMFGAGHLLELRNLKAIAEYRHRHGLPVTPVWMR

Sequences:

>Translated_215_residues
MSLPALEDIGDLIDGVTRIETSPREKATPIIMDMMRSVYPHDQVFGQYCTVNDYIDCPPDDLFEYMADTRSLEEWTYSLR
GFTPTDEPGLWLAHDRLGSETKIYTRTVANAQARTVDYHCAWDQGDHLWMIYLMRVVDAQTVLDKPGSVVLWTNCHHPFY
DHNPYPQTAPPQRPVWVGDFWDMFGAGHLLELRNLKAIAEYRHRHGLPVTPVWMR
>Mature_214_residues
SLPALEDIGDLIDGVTRIETSPREKATPIIMDMMRSVYPHDQVFGQYCTVNDYIDCPPDDLFEYMADTRSLEEWTYSLRG
FTPTDEPGLWLAHDRLGSETKIYTRTVANAQARTVDYHCAWDQGDHLWMIYLMRVVDAQTVLDKPGSVVLWTNCHHPFYD
HNPYPQTAPPQRPVWVGDFWDMFGAGHLLELRNLKAIAEYRHRHGLPVTPVWMR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24939; Mature: 24808

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLPALEDIGDLIDGVTRIETSPREKATPIIMDMMRSVYPHDQVFGQYCTVNDYIDCPPD
CCCCCHHHHHHHHHHHHHHCCCCCHHCCHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCHH
DLFEYMADTRSLEEWTYSLRGFTPTDEPGLWLAHDRLGSETKIYTRTVANAQARTVDYHC
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCEEEEEECCCCCCEEEEEEE
AWDQGDHLWMIYLMRVVDAQTVLDKPGSVVLWTNCHHPFYDHNPYPQTAPPQRPVWVGDF
CCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEECHH
WDMFGAGHLLELRNLKAIAEYRHRHGLPVTPVWMR
HHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
SLPALEDIGDLIDGVTRIETSPREKATPIIMDMMRSVYPHDQVFGQYCTVNDYIDCPPD
CCCCHHHHHHHHHHHHHHCCCCCHHCCHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCHH
DLFEYMADTRSLEEWTYSLRGFTPTDEPGLWLAHDRLGSETKIYTRTVANAQARTVDYHC
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCEEEEEECCCCCCEEEEEEE
AWDQGDHLWMIYLMRVVDAQTVLDKPGSVVLWTNCHHPFYDHNPYPQTAPPQRPVWVGDF
CCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEECHH
WDMFGAGHLLELRNLKAIAEYRHRHGLPVTPVWMR
HHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA