| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
Click here to switch to the map view.
The map label for this gene is 41410302
Identifier: 41410302
GI number: 41410302
Start: 4673292
End: 4673885
Strand: Direct
Name: 41410302
Synonym: MAP4204
Alternate gene names: NA
Gene position: 4673292-4673885 (Clockwise)
Preceding gene: 41410301
Following gene: 41410303
Centisome position: 96.76
GC content: 65.82
Gene sequence:
>594_bases GTGAACGGCCCGGGCGAATCCGTAAGGGTGCGAGGCGATTTCGACGCCCCGTCGCGCTGGCTGTGGCTGGTGAAGTGGTG CGTGCTGGCGGTGCCGCACTACCCGATCCTGATCGGGCTCTACCTGGTGTACCCGCTGTGCATCGTCGTCGCCGGGATCG CGATCGTCTGCACCGGTCGGTATCCGCGGCGGCTCTTCGACTTCAACGTCGGCGTGCTGCGCTGGTCCTGGCGGCTTATG AACTACCGATTCCCGATGAACAGCACGGACCGATACCCGCCGTTCACGCTCGCGGCCTCGCCCGACTATCCCGGCGACCT CGCCGTCGACTATCCGCGACGGCTGAAAAGGCTTGCGGTGCCGATCAAGTGGCTGTTGGCGATCCCGCACGTGCTGGTCT GCTGGTCGATGGAGCCGCTGCTGCAGGTGCTGTGCCTGACCGCCGCGCTGACGTTGCTGTGCACCGGCACCGTCCCGCCC GGCATGTTCGATCTGCTGATGGGCATCGTGCGGTGGCGGTACCGGGTGGCCGTCTACGTGTCGTTGATGCGTGACGAATA TCCGCCGTTCCGAATGGATCTGGGCTCCCGATGA
Upstream 100 bases:
>100_bases GCTGGACCAGCCACCGCCGCATGTCCGACCACATCAACCGCAGCTTGGGGGAAGCGATCAACCGCAGCTTGGGGGAAGCG CCGAAGATTCCGTCACGCCG
Downstream 100 bases:
>100_bases GATTCCGCAACGTGCTGTTCCCCTACGTGTACCGGTTCGGGCAGCCGGTGTTCGACCGGCTCTTCTACCACCGGTATCGG CGGCAGGCGATGAGTCACGC
Product: hypothetical protein
Products: NA
Alternate protein names: Integral Membrane Protein
Number of amino acids: Translated: 197; Mature: 197
Protein sequence:
>197_residues MNGPGESVRVRGDFDAPSRWLWLVKWCVLAVPHYPILIGLYLVYPLCIVVAGIAIVCTGRYPRRLFDFNVGVLRWSWRLM NYRFPMNSTDRYPPFTLAASPDYPGDLAVDYPRRLKRLAVPIKWLLAIPHVLVCWSMEPLLQVLCLTAALTLLCTGTVPP GMFDLLMGIVRWRYRVAVYVSLMRDEYPPFRMDLGSR
Sequences:
>Translated_197_residues MNGPGESVRVRGDFDAPSRWLWLVKWCVLAVPHYPILIGLYLVYPLCIVVAGIAIVCTGRYPRRLFDFNVGVLRWSWRLM NYRFPMNSTDRYPPFTLAASPDYPGDLAVDYPRRLKRLAVPIKWLLAIPHVLVCWSMEPLLQVLCLTAALTLLCTGTVPP GMFDLLMGIVRWRYRVAVYVSLMRDEYPPFRMDLGSR >Mature_197_residues MNGPGESVRVRGDFDAPSRWLWLVKWCVLAVPHYPILIGLYLVYPLCIVVAGIAIVCTGRYPRRLFDFNVGVLRWSWRLM NYRFPMNSTDRYPPFTLAASPDYPGDLAVDYPRRLKRLAVPIKWLLAIPHVLVCWSMEPLLQVLCLTAALTLLCTGTVPP GMFDLLMGIVRWRYRVAVYVSLMRDEYPPFRMDLGSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22693; Mature: 22693
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGPGESVRVRGDFDAPSRWLWLVKWCVLAVPHYPILIGLYLVYPLCIVVAGIAIVCTGR CCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEECCC YPRRLFDFNVGVLRWSWRLMNYRFPMNSTDRYPPFTLAASPDYPGDLAVDYPRRLKRLAV CCHHHHHCCCHHHHHEEEEHEEECCCCCCCCCCCEEEECCCCCCCCCEECHHHHHHHHHH PIKWLLAIPHVLVCWSMEPLLQVLCLTAALTLLCTGTVPPGMFDLLMGIVRWRYRVAVYV HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH SLMRDEYPPFRMDLGSR HHHHCCCCCCCCCCCCC >Mature Secondary Structure MNGPGESVRVRGDFDAPSRWLWLVKWCVLAVPHYPILIGLYLVYPLCIVVAGIAIVCTGR CCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEECCC YPRRLFDFNVGVLRWSWRLMNYRFPMNSTDRYPPFTLAASPDYPGDLAVDYPRRLKRLAV CCHHHHHCCCHHHHHEEEEHEEECCCCCCCCCCCEEEECCCCCCCCCEECHHHHHHHHHH PIKWLLAIPHVLVCWSMEPLLQVLCLTAALTLLCTGTVPPGMFDLLMGIVRWRYRVAVYV HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH SLMRDEYPPFRMDLGSR HHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA