Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41410301

Identifier: 41410301

GI number: 41410301

Start: 4672054

End: 4673295

Strand: Direct

Name: 41410301

Synonym: MAP4203

Alternate gene names: NA

Gene position: 4672054-4673295 (Clockwise)

Preceding gene: 41410300

Following gene: 41410302

Centisome position: 96.73

GC content: 74.48

Gene sequence:

>1242_bases
GTGGTCGGCGACGCGCGTCCGCTGCGGGTGCTGGTGGTGGGCGCCGGCGTGGCCGGCATCTCGGTGGCCCGCGGACTGCT
GCGCGACGGCCACGACGTCACCGTCTTCGAGAGCCGCCCCCGGCTGGCGGCGGCCGGCGGCGCGGTGACGGTGTGGTCCA
ACGGCGAGACGGTGCTGCGCCAGCTGGGCGTCGAGATGGACGGCGCCGGCCGGCAGCTGTCCAGCGTGCGGGCGGTGACG
TCGACGGGCCGGCCGCTGGCCACGCTGGACGTGACCGCGATGGCGCGGCGGCTGGGCGCGCCCGTGCGGATGGTGCCGCG
CCGGGTGCTGCTGGAGCGGCTGCTGGACGGATTCCCGCCCGGGCGCATCCACTGTGACCGTCGCGCGGTCGCACTGGCCA
CCTCCCGCGACGGGGTCAGCGTCGAATTCACCGACGGCACCGTGGCCGAGGGCGACGTGCTGATCGGCGCCGACGGCCTG
CACTCGATGGTGCGCGAGTGGGTCGGCGCCCGGCACGCCAAGGCGACCGGCTGGTGCAGCTGGCAGGGCCTGGTCAGCCT
CCCGGAGATCGCCGAGTCCGACGCCGCCCTGATGATGATCGGCGGCGGCGGAAACCTCGGCCTCTGGCCGGCCGGCGGCG
CCGAGGTGCAATGGTGGTTCGACCTGCCGTGGTCGGCGGGGTTCGTCCGGCCGCAACACCCGATCGAGACGATCCGCTCG
CACTTCGCCGGATGGTCCGAGCCGGTCGATCGGGTGCTGGCGATCCTGACCGACGAGGATCTGGCCGCGTCGCCGTTCCC
GCATTTTCGGCATCCGATCCCGCGCCCCGGGCAGGGCCGGGTCACCCTGCTCGGCGACGCCGCGCACACCATGCCGCCCA
CCCTGGCGCAGGGGACCAACCAGGCGCTGCTCGACACGATGGTGCTGTGCCAGGCGCTGGCCGATTTCGGGCGGGGGACA
CCCGGCGGCCAGGCCGACGTCGCGAACGCGCTGCGCTGGTACGAGAAGACCCGGCGCCGCCGGGTCCGGGCGGTGTCCTG
GGTGGCCTCGCTGCCGGTGTCGCACGGCGAGGCCGTGCTGCGCCCGGCCGCGCTGGTCTCCGACCGGCTGCAGGCCGCCG
CGCTGACGATGTTCCTGCGCTGGACCAGCCACCGCCGCATGTCCGACCACATCAACCGCAGCTTGGGGGAAGCGATCAAC
CGCAGCTTGGGGGAAGCGCCGAAGATTCCGTCACGCCGGTGA

Upstream 100 bases:

>100_bases
GATCTCGACGCCGGTGGACCAGATCGCCGCCGTGCAAGTGGTGGCCGCCGACAGCGGCCAGGTGCTGCTGCAGCGTTCCC
TGTAAACGATCGGAGCCAGC

Downstream 100 bases:

>100_bases
ACGGCCCGGGCGAATCCGTAAGGGTGCGAGGCGATTTCGACGCCCCGTCGCGCTGGCTGTGGCTGGTGAAGTGGTGCGTG
CTGGCGGTGCCGCACTACCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 413; Mature: 413

Protein sequence:

>413_residues
MVGDARPLRVLVVGAGVAGISVARGLLRDGHDVTVFESRPRLAAAGGAVTVWSNGETVLRQLGVEMDGAGRQLSSVRAVT
STGRPLATLDVTAMARRLGAPVRMVPRRVLLERLLDGFPPGRIHCDRRAVALATSRDGVSVEFTDGTVAEGDVLIGADGL
HSMVREWVGARHAKATGWCSWQGLVSLPEIAESDAALMMIGGGGNLGLWPAGGAEVQWWFDLPWSAGFVRPQHPIETIRS
HFAGWSEPVDRVLAILTDEDLAASPFPHFRHPIPRPGQGRVTLLGDAAHTMPPTLAQGTNQALLDTMVLCQALADFGRGT
PGGQADVANALRWYEKTRRRRVRAVSWVASLPVSHGEAVLRPAALVSDRLQAAALTMFLRWTSHRRMSDHINRSLGEAIN
RSLGEAPKIPSRR

Sequences:

>Translated_413_residues
MVGDARPLRVLVVGAGVAGISVARGLLRDGHDVTVFESRPRLAAAGGAVTVWSNGETVLRQLGVEMDGAGRQLSSVRAVT
STGRPLATLDVTAMARRLGAPVRMVPRRVLLERLLDGFPPGRIHCDRRAVALATSRDGVSVEFTDGTVAEGDVLIGADGL
HSMVREWVGARHAKATGWCSWQGLVSLPEIAESDAALMMIGGGGNLGLWPAGGAEVQWWFDLPWSAGFVRPQHPIETIRS
HFAGWSEPVDRVLAILTDEDLAASPFPHFRHPIPRPGQGRVTLLGDAAHTMPPTLAQGTNQALLDTMVLCQALADFGRGT
PGGQADVANALRWYEKTRRRRVRAVSWVASLPVSHGEAVLRPAALVSDRLQAAALTMFLRWTSHRRMSDHINRSLGEAIN
RSLGEAPKIPSRR
>Mature_413_residues
MVGDARPLRVLVVGAGVAGISVARGLLRDGHDVTVFESRPRLAAAGGAVTVWSNGETVLRQLGVEMDGAGRQLSSVRAVT
STGRPLATLDVTAMARRLGAPVRMVPRRVLLERLLDGFPPGRIHCDRRAVALATSRDGVSVEFTDGTVAEGDVLIGADGL
HSMVREWVGARHAKATGWCSWQGLVSLPEIAESDAALMMIGGGGNLGLWPAGGAEVQWWFDLPWSAGFVRPQHPIETIRS
HFAGWSEPVDRVLAILTDEDLAASPFPHFRHPIPRPGQGRVTLLGDAAHTMPPTLAQGTNQALLDTMVLCQALADFGRGT
PGGQADVANALRWYEKTRRRRVRAVSWVASLPVSHGEAVLRPAALVSDRLQAAALTMFLRWTSHRRMSDHINRSLGEAIN
RSLGEAPKIPSRR

Specific function: Catalyzes the oxidative decarboxylation of 6- hydroxynicotinic acid to 2,5-dihydroxypyridine. Uses NADH in preference to NADPH as an electron donor [H]

COG id: COG0654

COG function: function code HC; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002938
- InterPro:   IPR003042 [H]

Pfam domain/function: PF01494 FAD_binding_3 [H]

EC number: =1.14.13.114 [H]

Molecular weight: Translated: 44418; Mature: 44418

Theoretical pI: Translated: 10.99; Mature: 10.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGDARPLRVLVVGAGVAGISVARGLLRDGHDVTVFESRPRLAAAGGAVTVWSNGETVLR
CCCCCCCEEEEEEECCHHHHHHHHHHHHCCCCEEEECCCCCEEECCCEEEEECCCHHHHH
QLGVEMDGAGRQLSSVRAVTSTGRPLATLDVTAMARRLGAPVRMVPRRVLLERLLDGFPP
HHCCCCCCCCCHHHHHHHHHCCCCCEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC
GRIHCDRRAVALATSRDGVSVEFTDGTVAEGDVLIGADGLHSMVREWVGARHAKATGWCS
CCEEECCCEEEEEECCCCCEEEECCCCCCCCCEEEECHHHHHHHHHHHCCCCCCCCCCCC
WQGLVSLPEIAESDAALMMIGGGGNLGLWPAGGAEVQWWFDLPWSAGFVRPQHPIETIRS
CCCCCCCHHHCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHH
HFAGWSEPVDRVLAILTDEDLAASPFPHFRHPIPRPGQGRVTLLGDAAHTMPPTLAQGTN
HHCCCHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCCEEEEECCCCCCCCHHHCCCC
QALLDTMVLCQALADFGRGTPGGQADVANALRWYEKTRRRRVRAVSWVASLPVSHGEAVL
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
RPAALVSDRLQAAALTMFLRWTSHRRMSDHINRSLGEAINRSLGEAPKIPSRR
HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MVGDARPLRVLVVGAGVAGISVARGLLRDGHDVTVFESRPRLAAAGGAVTVWSNGETVLR
CCCCCCCEEEEEEECCHHHHHHHHHHHHCCCCEEEECCCCCEEECCCEEEEECCCHHHHH
QLGVEMDGAGRQLSSVRAVTSTGRPLATLDVTAMARRLGAPVRMVPRRVLLERLLDGFPP
HHCCCCCCCCCHHHHHHHHHCCCCCEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC
GRIHCDRRAVALATSRDGVSVEFTDGTVAEGDVLIGADGLHSMVREWVGARHAKATGWCS
CCEEECCCEEEEEECCCCCEEEECCCCCCCCCEEEECHHHHHHHHHHHCCCCCCCCCCCC
WQGLVSLPEIAESDAALMMIGGGGNLGLWPAGGAEVQWWFDLPWSAGFVRPQHPIETIRS
CCCCCCCHHHCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHH
HFAGWSEPVDRVLAILTDEDLAASPFPHFRHPIPRPGQGRVTLLGDAAHTMPPTLAQGTN
HHCCCHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCCEEEEECCCCCCCCHHHCCCC
QALLDTMVLCQALADFGRGTPGGQADVANALRWYEKTRRRRVRAVSWVASLPVSHGEAVL
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
RPAALVSDRLQAAALTMFLRWTSHRRMSDHINRSLGEAINRSLGEAPKIPSRR
HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA