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The map label for this gene is xylB

Identifier: 41410293

GI number: 41410293

Start: 4664824

End: 4666179

Strand: Direct

Name: xylB

Synonym: MAP4195

Alternate gene names: 41410293

Gene position: 4664824-4666179 (Clockwise)

Preceding gene: 41410290

Following gene: 41410294

Centisome position: 96.58

GC content: 76.25

Gene sequence:

>1356_bases
GTGTCACGCAAGGACGTCACAATCGGCATCGACGTCGGCAGCACCGCGGTCAAGGCGTTAGCCGCCGACGCCGACGGCCG
GGTCATGGCCCGCGTGCGCATCCCGCACGAACTGCGGATACCGGCACCCGACCGGCTCGAGCACGACGCCGAGGCGGCGT
GGCGGCGCGGCCCGTCGGCCGCCCTGGACGAACTGCTGCATCAGCCCGGCGTCGCGGCGGTGGCGGTCGCGGCCATGGTG
CCGTCGATGACGGCGGTCGACGGCTCCGGCACGCCGATCACCCCGGGACTGCTCTACGGCGACGGCCGGGGCCGCACCCC
GGGCGGCCCGCAAAATCAGCCGCTGCCCGCGCTGGGCGAGGCCGCCGAGTTCCTGCGCTGGACGGCGGCCCGCGCTCCCG
GTGCCGCCGGCTACTGGCCGGCGCCCGCGGTGGCCAACCACGCGCTGGCCGGCCAGGCCGTGATCGACGTCGCCACCGCC
GCCACCGCCTTCCCGTTGTTCGACGGGACCGGCTGGGACGCCGCCGCGTGCGCCGAGCGCGGCGCGCGCGTCGAGCAGAT
GCCGCGGGTGCACAGCATGGGCGCCGTTGTCGGGCAGCTGCCGGGCGGCGCGGCGCTGGCCACCGGCGCCATCGACGCGC
TGTGCGAACAGCTCGTGGCCGGCGCCGACCGCGACGGCGACGTGCTGGTGATGTGCGGCACCACGCTGATCGTGTGGGCC
ACCATTTCCCAGGCCCGGCAGATGCCCGGGCTGTGGACCATCCCGCACACCACGCCGGGCAAGAGCCAGATCGGCGGCGC
CAGCAACGCCGGCGGGCTGTTCCTCGGCTGGGTGGATCGCGTTGTGGCACAAGCGGATCCGGCATCTGCCCAGCCCGGGC
GGGTGCCGGTGTTCGCGCCCTACCTGCGCGGCGAGCGCAGCCCGTTCCACGACCCGGACCGCCGCGGCGTGCTCGAGGCG
CTGGACCTGACCCACGACGCCGCCGCGCTGCGCCGGGCCGCCTACGAGGCGTCCGGGTTCGTGGTGCGCCAGCTCATCGA
GCTGTCCGGCGCGCCGGTGTCGCGCATCGTGGCCACCGGCGGCGGCACCCGGGTGGGGCCGTGGCTGCAGGCCATCGCCG
ATGCCACCGGGCACCCGGTCGAGGTGTCCGCGGTGGCCGAGGGCGCCGCGCTGGGCGCCGCGTTCCTGGCCAGGATGGCC
GCCGGCCTGGAGACCACCCTCACCGACGCCGCGCGCTGGGTGCGCACCGAGCGCGTCGTCGAGCCCGACCCGGCCTGGGC
CGCCCCGGTGCAGGACCGCTACCAACGGTTCCTGGAGTTGGGAAACCGCCCGTGTCCCGCGGTTGTGGCGCGGTAG

Upstream 100 bases:

>100_bases
GCACCCGCAGTTTGTCCAGGCCCGGCCCGCGCAGCGGGGCGGTCACCAAGGCGCGCGGTTTGGACGTCACGCCTGCCAAT
GCTGGCGTACGGTGACGCCC

Downstream 100 bases:

>100_bases
CCGCACCGGCGTTCTAGGCTGGTGCAATGACCGACCAGGACCGCAAAGCCGCCCGCCGGGAAATCGCCGATGCCCTGTTG
AAAGCGCTGGAACGACGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: Xylulokinase [H]

Number of amino acids: Translated: 451; Mature: 450

Protein sequence:

>451_residues
MSRKDVTIGIDVGSTAVKALAADADGRVMARVRIPHELRIPAPDRLEHDAEAAWRRGPSAALDELLHQPGVAAVAVAAMV
PSMTAVDGSGTPITPGLLYGDGRGRTPGGPQNQPLPALGEAAEFLRWTAARAPGAAGYWPAPAVANHALAGQAVIDVATA
ATAFPLFDGTGWDAAACAERGARVEQMPRVHSMGAVVGQLPGGAALATGAIDALCEQLVAGADRDGDVLVMCGTTLIVWA
TISQARQMPGLWTIPHTTPGKSQIGGASNAGGLFLGWVDRVVAQADPASAQPGRVPVFAPYLRGERSPFHDPDRRGVLEA
LDLTHDAAALRRAAYEASGFVVRQLIELSGAPVSRIVATGGGTRVGPWLQAIADATGHPVEVSAVAEGAALGAAFLARMA
AGLETTLTDAARWVRTERVVEPDPAWAAPVQDRYQRFLELGNRPCPAVVAR

Sequences:

>Translated_451_residues
MSRKDVTIGIDVGSTAVKALAADADGRVMARVRIPHELRIPAPDRLEHDAEAAWRRGPSAALDELLHQPGVAAVAVAAMV
PSMTAVDGSGTPITPGLLYGDGRGRTPGGPQNQPLPALGEAAEFLRWTAARAPGAAGYWPAPAVANHALAGQAVIDVATA
ATAFPLFDGTGWDAAACAERGARVEQMPRVHSMGAVVGQLPGGAALATGAIDALCEQLVAGADRDGDVLVMCGTTLIVWA
TISQARQMPGLWTIPHTTPGKSQIGGASNAGGLFLGWVDRVVAQADPASAQPGRVPVFAPYLRGERSPFHDPDRRGVLEA
LDLTHDAAALRRAAYEASGFVVRQLIELSGAPVSRIVATGGGTRVGPWLQAIADATGHPVEVSAVAEGAALGAAFLARMA
AGLETTLTDAARWVRTERVVEPDPAWAAPVQDRYQRFLELGNRPCPAVVAR
>Mature_450_residues
SRKDVTIGIDVGSTAVKALAADADGRVMARVRIPHELRIPAPDRLEHDAEAAWRRGPSAALDELLHQPGVAAVAVAAMVP
SMTAVDGSGTPITPGLLYGDGRGRTPGGPQNQPLPALGEAAEFLRWTAARAPGAAGYWPAPAVANHALAGQAVIDVATAA
TAFPLFDGTGWDAAACAERGARVEQMPRVHSMGAVVGQLPGGAALATGAIDALCEQLVAGADRDGDVLVMCGTTLIVWAT
ISQARQMPGLWTIPHTTPGKSQIGGASNAGGLFLGWVDRVVAQADPASAQPGRVPVFAPYLRGERSPFHDPDRRGVLEAL
DLTHDAAALRRAAYEASGFVVRQLIELSGAPVSRIVATGGGTRVGPWLQAIADATGHPVEVSAVAEGAALGAAFLARMAA
GLETTLTDAARWVRTERVVEPDPAWAAPVQDRYQRFLELGNRPCPAVVAR

Specific function: Unknown

COG id: COG1070

COG function: function code G; Sugar (pentulose and hexulose) kinases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FGGY kinase family [H]

Homologues:

Organism=Escherichia coli, GI1789987, Length=155, Percent_Identity=31.6129032258064, Blast_Score=70, Evalue=4e-13,
Organism=Escherichia coli, GI1787789, Length=510, Percent_Identity=22.9411764705882, Blast_Score=68, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000577
- InterPro:   IPR018485
- InterPro:   IPR018483
- InterPro:   IPR018484
- InterPro:   IPR006000 [H]

Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N [H]

EC number: =2.7.1.17 [H]

Molecular weight: Translated: 46671; Mature: 46540

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRKDVTIGIDVGSTAVKALAADADGRVMARVRIPHELRIPAPDRLEHDAEAAWRRGPSA
CCCCCEEEEECCCHHHHHHHHCCCCCCEEEEEECCCEEECCCCHHHCHHHHHHHHCCCHH
ALDELLHQPGVAAVAVAAMVPSMTAVDGSGTPITPGLLYGDGRGRTPGGPQNQPLPALGE
HHHHHHHCCCHHHHHHHHHHCCCEEECCCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHH
AAEFLRWTAARAPGAAGYWPAPAVANHALAGQAVIDVATAATAFPLFDGTGWDAAACAER
HHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHC
GARVEQMPRVHSMGAVVGQLPGGAALATGAIDALCEQLVAGADRDGDVLVMCGTTLIVWA
CCCHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHH
TISQARQMPGLWTIPHTTPGKSQIGGASNAGGLFLGWVDRVVAQADPASAQPGRVPVFAP
HHHHHHHCCCEEECCCCCCCHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEH
YLRGERSPFHDPDRRGVLEALDLTHDAAALRRAAYEASGFVVRQLIELSGAPVSRIVATG
HHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEECC
GGTRVGPWLQAIADATGHPVEVSAVAEGAALGAAFLARMAAGLETTLTDAARWVRTERVV
CCCCHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCC
EPDPAWAAPVQDRYQRFLELGNRPCPAVVAR
CCCCCCCCCHHHHHHHHHHHCCCCCCHHCCC
>Mature Secondary Structure 
SRKDVTIGIDVGSTAVKALAADADGRVMARVRIPHELRIPAPDRLEHDAEAAWRRGPSA
CCCCEEEEECCCHHHHHHHHCCCCCCEEEEEECCCEEECCCCHHHCHHHHHHHHCCCHH
ALDELLHQPGVAAVAVAAMVPSMTAVDGSGTPITPGLLYGDGRGRTPGGPQNQPLPALGE
HHHHHHHCCCHHHHHHHHHHCCCEEECCCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHH
AAEFLRWTAARAPGAAGYWPAPAVANHALAGQAVIDVATAATAFPLFDGTGWDAAACAER
HHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHC
GARVEQMPRVHSMGAVVGQLPGGAALATGAIDALCEQLVAGADRDGDVLVMCGTTLIVWA
CCCHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHH
TISQARQMPGLWTIPHTTPGKSQIGGASNAGGLFLGWVDRVVAQADPASAQPGRVPVFAP
HHHHHHHCCCEEECCCCCCCHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEH
YLRGERSPFHDPDRRGVLEALDLTHDAAALRRAAYEASGFVVRQLIELSGAPVSRIVATG
HHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEECC
GGTRVGPWLQAIADATGHPVEVSAVAEGAALGAAFLARMAAGLETTLTDAARWVRTERVV
CCCCHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCC
EPDPAWAAPVQDRYQRFLELGNRPCPAVVAR
CCCCCCCCCHHHHHHHHHHHCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1660563 [H]