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The map label for this gene is rfaD [C]

Identifier: 41410130

GI number: 41410130

Start: 4492587

End: 4493024

Strand: Direct

Name: rfaD [C]

Synonym: MAP4032

Alternate gene names: 41410130

Gene position: 4492587-4493024 (Clockwise)

Preceding gene: 41410129

Following gene: 41410132

Centisome position: 93.02

GC content: 72.83

Gene sequence:

>438_bases
GTGGTGGCGCTGCGCTACCACAACGTGTACGGCCCCGGCATGCCGCGCGACACCCCGTACTCCGGGGTGGCGGCGATCTT
CCGCTCGGCGCTGGAAAAGGGTGAGCCGCCAAGGGTTTTCGAGGACGGCGGGCAGATGCGCGACTTCGTCCACGTCGACG
ACGTGGCCGCCGCCAACCTCGCGGCGCTGGCTTGCCGCGACGGCTTCACCGCGGTGAATGTCTGCTCGGGGCAACCCATT
TCGATCTTGCAGGTGGCGACCGCGCTGTGCGACGCCCGCGGCGGCGCGGTCGCGCCGGTGGTCACCGGCCAGTACCGCAG
CGGCGACGTCCGCCACATCGTCGCCGACCCGTCGCGGGCCGCGCGGCTGCTGGGGTTTCGCGCCGCCGTCCAACCCGGCG
ACGGGCTGCGCGAATTCGCGTTCGCGCCGCTGCGGTGA

Upstream 100 bases:

>100_bases
CGACGAGGACGCCTGCCTGCGGCCTCGCAGCCTGTACGCCGCCAGCAAGACCGCCCAGGAGCATTACGCGCTGGCCTGGT
CGGAGGCCACCGGCGGGTCG

Downstream 100 bases:

>100_bases
CGGCTACTGCTGCGGCGGCCTGTAGATCTGGGGCTTGGGCACCGGGATCTGCCGCGTCCCGGAGTCGTCGCCGCGGAAGA
TCCGGGGCGACCCGGCGAGC

Product: hypothetical protein

Products: UDPgalactose

Alternate protein names: UDP-Glucose 4-Epimerase; Epimerase; Nucleoside-Diphosphate-Sugar Epimerase; NAD-Dependent Epimerase/Dehydratase Family Protein; Sugar Nucleotide Epimerase/Dehydratase; Epimerase/Dehydratase; NAD Dependent Epimerase/Dehydratase Family Protein; Exopolysaccharide Biosynthesis Protein; UDP-Glucose 4-Epimerase Protein; NAD-Dependent Epimerase/Dehydratasen; UDP-Glucose 4-Epimerase-Like Protein; Dehydrogenase Family Protein; NDP-Glucose Dehydratase Epimerase Protein; Nucleoside-Diphosphate-Sugar Epimerases; UDP-Glucose 4-Epimerase Related Protein; DTDP-Glucose 4 6-Dehydratase; NDP-Sugar Dehydratase Or Epimerase; NDP-Sugar Oxidoreductase UDP-Glucose 4-Epimerase; NAD Dependent Epimerase/Dehydratase

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MVALRYHNVYGPGMPRDTPYSGVAAIFRSALEKGEPPRVFEDGGQMRDFVHVDDVAAANLAALACRDGFTAVNVCSGQPI
SILQVATALCDARGGAVAPVVTGQYRSGDVRHIVADPSRAARLLGFRAAVQPGDGLREFAFAPLR

Sequences:

>Translated_145_residues
MVALRYHNVYGPGMPRDTPYSGVAAIFRSALEKGEPPRVFEDGGQMRDFVHVDDVAAANLAALACRDGFTAVNVCSGQPI
SILQVATALCDARGGAVAPVVTGQYRSGDVRHIVADPSRAARLLGFRAAVQPGDGLREFAFAPLR
>Mature_145_residues
MVALRYHNVYGPGMPRDTPYSGVAAIFRSALEKGEPPRVFEDGGQMRDFVHVDDVAAANLAALACRDGFTAVNVCSGQPI
SILQVATALCDARGGAVAPVVTGQYRSGDVRHIVADPSRAARLLGFRAAVQPGDGLREFAFAPLR

Specific function: Biosynthesis Of The Lipopolysaccharide Precursor ADP-L- Glycerol-D-Mannoheptose. [C]

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 220 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 5.1.3.2

Molecular weight: Translated: 15340; Mature: 15340

Theoretical pI: Translated: 8.07; Mature: 8.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVALRYHNVYGPGMPRDTPYSGVAAIFRSALEKGEPPRVFEDGGQMRDFVHVDDVAAANL
CEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCHHHHHHH
AALACRDGFTAVNVCSGQPISILQVATALCDARGGAVAPVVTGQYRSGDVRHIVADPSRA
HHHHHCCCCCEEEECCCCCHHHHHHHHHHHHCCCCEECEEEECCCCCCCEEEEEECCHHH
ARLLGFRAAVQPGDGLREFAFAPLR
HHHHHHHHCCCCCCCHHHHCCCCCC
>Mature Secondary Structure
MVALRYHNVYGPGMPRDTPYSGVAAIFRSALEKGEPPRVFEDGGQMRDFVHVDDVAAANL
CEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCHHHHHHH
AALACRDGFTAVNVCSGQPISILQVATALCDARGGAVAPVVTGQYRSGDVRHIVADPSRA
HHHHHCCCCCEEEECCCCCHHHHHHHHHHHHCCCCEECEEEECCCCCCCEEEEEECCHHH
ARLLGFRAAVQPGDGLREFAFAPLR
HHHHHHHHCCCCCCCHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: UDP-glucose

Specific reaction: UDP-glucose = UDP-galactose

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA