| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is regX3
Identifier: 41410081
GI number: 41410081
Start: 4442003
End: 4442686
Strand: Direct
Name: regX3
Synonym: MAP3983
Alternate gene names: 41410081
Gene position: 4442003-4442686 (Clockwise)
Preceding gene: 41410080
Following gene: 41410085
Centisome position: 91.97
GC content: 67.54
Gene sequence:
>684_bases ATGACCAGTGTGCTGATTGTCGAGGACGAGGAGTCGCTGGCCGACCCGCTGGCCTTCCTGCTCCGTAAGGAGGGCTTCGA GGCCACCGTGGTGACCGACGGCTCCGCCGCGCTCGCCGAATTCGATCGGGCCGGCGCCGACATCGTGCTGCTCGACCTGA TGCTCCCCGGGATGTCGGGCACCGACGTCTGCAAGCAGCTGCGCGCGCGTTCCAGCGTGCCGGTGATCATGGTGACCGCC CGGGACAGCGAGATCGACAAGGTCGTCGGCCTCGAGCTCGGCGCCGATGACTATGTGACCAAGCCGTATTCGGCGCGGGA GCTGATCGCGCGGATCCGGGCGGTGCTGCGCCGCGGCGGTGACGACGACTCCGAGATCAGCGACGGCGTGCTCGAATCCG GCCCGGTGCGGATGGACGTCGAACGCCACGTGGTTTCGGTCAACGGTGACACGATCACGTTGCCGCTCAAGGAATTCGAC CTGCTCGAGTACCTGATGCGCAACAGCGGCCGGGTGCTGACCCGCGGCCAGCTGATCGACCGGGTGTGGGGCGCCGACTA CGTCGGCGACACCAAGACGCTCGACGTGCACGTCAAGCGGCTGCGCTCCAAGATCGAAGCCGACCCGGCCAACCCGGTGC ACCTGGTGACGGTGCGCGGGCTGGGCTACAAGCTGGAAGGCTAA
Upstream 100 bases:
>100_bases CGCGCGTATGACGATGCAGAGCGTAGCGATGAGGAGGAATCGCGCCGATGACCCGCGCGTATGACGATGCAGAGCGTAGC GATGAGGAGGAATCGCGCCG
Downstream 100 bases:
>100_bases CTAGCCCGACGGGCGTGCCGGCGGCGGACCGTCGGTGTCGAAGACGGTCCGCTCATCGTCGTTGGCGCTCAACGTGATAC GCCGACGCATGTCCGCCGTC
Product: RegX3
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 227; Mature: 226
Protein sequence:
>227_residues MTSVLIVEDEESLADPLAFLLRKEGFEATVVTDGSAALAEFDRAGADIVLLDLMLPGMSGTDVCKQLRARSSVPVIMVTA RDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGGDDDSEISDGVLESGPVRMDVERHVVSVNGDTITLPLKEFD LLEYLMRNSGRVLTRGQLIDRVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLEG
Sequences:
>Translated_227_residues MTSVLIVEDEESLADPLAFLLRKEGFEATVVTDGSAALAEFDRAGADIVLLDLMLPGMSGTDVCKQLRARSSVPVIMVTA RDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGGDDDSEISDGVLESGPVRMDVERHVVSVNGDTITLPLKEFD LLEYLMRNSGRVLTRGQLIDRVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLEG >Mature_226_residues TSVLIVEDEESLADPLAFLLRKEGFEATVVTDGSAALAEFDRAGADIVLLDLMLPGMSGTDVCKQLRARSSVPVIMVTAR DSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGGDDDSEISDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDL LEYLMRNSGRVLTRGQLIDRVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLEG
Specific function: Part of the two-component regulatory system senX3/regX3. Once phosphorylated by senX3, activates the expression of several operons/genes involved in phosphate assimilation and metabolism, such as pstSCAB, phnDCE, and phoA [H]
COG id: COG0745
COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1786599, Length=226, Percent_Identity=39.3805309734513, Blast_Score=160, Evalue=7e-41, Organism=Escherichia coli, GI1788394, Length=224, Percent_Identity=38.8392857142857, Blast_Score=158, Evalue=3e-40, Organism=Escherichia coli, GI1790860, Length=226, Percent_Identity=38.0530973451327, Blast_Score=154, Evalue=4e-39, Organism=Escherichia coli, GI1789809, Length=225, Percent_Identity=36, Blast_Score=150, Evalue=8e-38, Organism=Escherichia coli, GI1786911, Length=228, Percent_Identity=38.5964912280702, Blast_Score=149, Evalue=1e-37, Organism=Escherichia coli, GI87082012, Length=222, Percent_Identity=37.3873873873874, Blast_Score=146, Evalue=9e-37, Organism=Escherichia coli, GI1786784, Length=225, Percent_Identity=38.6666666666667, Blast_Score=146, Evalue=1e-36, Organism=Escherichia coli, GI1789402, Length=224, Percent_Identity=37.5, Blast_Score=137, Evalue=6e-34, Organism=Escherichia coli, GI1790863, Length=232, Percent_Identity=32.3275862068966, Blast_Score=136, Evalue=9e-34, Organism=Escherichia coli, GI2367329, Length=227, Percent_Identity=39.2070484581498, Blast_Score=134, Evalue=5e-33, Organism=Escherichia coli, GI1787229, Length=227, Percent_Identity=35.6828193832599, Blast_Score=127, Evalue=5e-31, Organism=Escherichia coli, GI1787375, Length=224, Percent_Identity=34.375, Blast_Score=124, Evalue=4e-30, Organism=Escherichia coli, GI1790552, Length=224, Percent_Identity=34.8214285714286, Blast_Score=122, Evalue=2e-29, Organism=Escherichia coli, GI145693140, Length=231, Percent_Identity=32.034632034632, Blast_Score=119, Evalue=2e-28, Organism=Escherichia coli, GI1788550, Length=109, Percent_Identity=34.8623853211009, Blast_Score=65, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001867 - InterPro: IPR001789 - InterPro: IPR011991 [H]
Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]
EC number: NA
Molecular weight: Translated: 24822; Mature: 24691
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSVLIVEDEESLADPLAFLLRKEGFEATVVTDGSAALAEFDRAGADIVLLDLMLPGMSG CCEEEEEECCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHCCCCEEEEEECCCCCCH TDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGG HHHHHHHHHCCCCCEEEEEECCCCCHHEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCC DDDSEISDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQLID CCCHHHHCCCCCCCCEEEEEEEEEEEECCCEEEEEHHHHHHHHHHHHCCCCEEEHHHHHH RVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLEG HHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEECC >Mature Secondary Structure TSVLIVEDEESLADPLAFLLRKEGFEATVVTDGSAALAEFDRAGADIVLLDLMLPGMSG CEEEEEECCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHCCCCEEEEEECCCCCCH TDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGG HHHHHHHHHCCCCCEEEEEECCCCCHHEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCC DDDSEISDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQLID CCCHHHHCCCCCCCCEEEEEEEEEEEECCCEEEEEHHHHHHHHHHHHCCCCEEEHHHHHH RVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLEG HHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA