| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is gpmA
Identifier: 41410079
GI number: 41410079
Start: 4439757
End: 4440506
Strand: Direct
Name: gpmA
Synonym: MAP3981
Alternate gene names: 41410079
Gene position: 4439757-4440506 (Clockwise)
Preceding gene: 41410078
Following gene: 41410080
Centisome position: 91.92
GC content: 71.73
Gene sequence:
>750_bases ATGGGTGAGACTGCCACGCTGGTACTGCTGCGCCACGGCGAAAGCGAATGGAACTCGCTGAACCTGTTCACCGGTTGGGT GGACGTCGGGCTGACCGACAAGGGCCGCGCCGAGGCGGTGCGCAGCGGCGAGCTGCTGGCCGAGCAGGGCCTGCTGCCCG ACGCGCTCTACACGTCGCTGCTGCGCCGCGCGATCACCACCGCGCATCTGGCCCTGGACGCCGCGGACCGGCTGTGGATC CCGGTGCGGCGCAGCTGGCGGCTCAACGAACGCCACTACGGGGCGCTGCAGGGCCTGGACAAGGCCGAGACGAAGGCGCG CTACGGCGAGGAGCAGTTCATGGCCTGGCGACGCAGCTATGACACGCCGCCGCCGCCGATCGAGCGGGGCAGCACCTACA GCCAGGACGCCGATCCGCGCTACGCCGACATCGGCGGCGGGCCGCTGACCGAGTGCCTGGCCGACGTGGTCGTCCGGTTC CTGCCGTACTTCACCGACGTCATCGTCCCGGACCTGCGCAGCGGCAAGACGGTGCTGATCGTCGCGCACGGCAACTCGCT GCGCGCCCTGGTCAAGCACCTCGATCAGATGTCCGACGACGACGTCGTGGGGCTGAACATCCCGACCGGCATCCCGCTGC GCTACGACTTGGACGCCCGGCTGCGGCCGCTGGTTCCCGGCGGCACCTACCTCGACCCCGAGGCGGCCGCCGCCGGCGCC GCCGCGGTTGCCAGCCAGGGGCGCGGCTGA
Upstream 100 bases:
>100_bases GAAGAACCTGCAGGCCTTTGCTCATCTGATCGACGACGACGAGGGTTAGCCCGGGGCCACGCCCGGCAGCGCTTTTCGGG TGCGTGAGAGACTAACCGGC
Downstream 100 bases:
>100_bases GGCGTCGAACCCCGCCGGGAGGCTGCCCAGGGGGGCGCCGAAAGCCCCATTTGCCAAACAGCACGTGAACGGAAGCAGAA CACCTGTTACGCAAGGTGTG
Product: phosphoglyceromutase
Products: NA
Alternate protein names: BPG-dependent PGAM; PGAM; Phosphoglyceromutase; dPGM [H]
Number of amino acids: Translated: 249; Mature: 248
Protein sequence:
>249_residues MGETATLVLLRHGESEWNSLNLFTGWVDVGLTDKGRAEAVRSGELLAEQGLLPDALYTSLLRRAITTAHLALDAADRLWI PVRRSWRLNERHYGALQGLDKAETKARYGEEQFMAWRRSYDTPPPPIERGSTYSQDADPRYADIGGGPLTECLADVVVRF LPYFTDVIVPDLRSGKTVLIVAHGNSLRALVKHLDQMSDDDVVGLNIPTGIPLRYDLDARLRPLVPGGTYLDPEAAAAGA AAVASQGRG
Sequences:
>Translated_249_residues MGETATLVLLRHGESEWNSLNLFTGWVDVGLTDKGRAEAVRSGELLAEQGLLPDALYTSLLRRAITTAHLALDAADRLWI PVRRSWRLNERHYGALQGLDKAETKARYGEEQFMAWRRSYDTPPPPIERGSTYSQDADPRYADIGGGPLTECLADVVVRF LPYFTDVIVPDLRSGKTVLIVAHGNSLRALVKHLDQMSDDDVVGLNIPTGIPLRYDLDARLRPLVPGGTYLDPEAAAAGA AAVASQGRG >Mature_248_residues GETATLVLLRHGESEWNSLNLFTGWVDVGLTDKGRAEAVRSGELLAEQGLLPDALYTSLLRRAITTAHLALDAADRLWIP VRRSWRLNERHYGALQGLDKAETKARYGEEQFMAWRRSYDTPPPPIERGSTYSQDADPRYADIGGGPLTECLADVVVRFL PYFTDVIVPDLRSGKTVLIVAHGNSLRALVKHLDQMSDDDVVGLNIPTGIPLRYDLDARLRPLVPGGTYLDPEAAAAGAA AVASQGRG
Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate [H]
COG id: COG0588
COG function: function code G; Phosphoglycerate mutase 1
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily [H]
Homologues:
Organism=Homo sapiens, GI50593010, Length=250, Percent_Identity=48.4, Blast_Score=247, Evalue=6e-66, Organism=Homo sapiens, GI4505753, Length=247, Percent_Identity=48.9878542510121, Blast_Score=229, Evalue=1e-60, Organism=Homo sapiens, GI4502445, Length=249, Percent_Identity=44.578313253012, Blast_Score=218, Evalue=4e-57, Organism=Homo sapiens, GI40353764, Length=249, Percent_Identity=44.578313253012, Blast_Score=218, Evalue=4e-57, Organism=Homo sapiens, GI71274132, Length=247, Percent_Identity=46.5587044534413, Blast_Score=216, Evalue=2e-56, Organism=Homo sapiens, GI310129614, Length=160, Percent_Identity=50.625, Blast_Score=144, Evalue=9e-35, Organism=Escherichia coli, GI1786970, Length=220, Percent_Identity=52.7272727272727, Blast_Score=244, Evalue=3e-66, Organism=Saccharomyces cerevisiae, GI6322697, Length=244, Percent_Identity=64.7540983606557, Blast_Score=296, Evalue=2e-81, Organism=Saccharomyces cerevisiae, GI6320183, Length=296, Percent_Identity=33.445945945946, Blast_Score=157, Evalue=1e-39, Organism=Saccharomyces cerevisiae, GI6324516, Length=295, Percent_Identity=33.2203389830508, Blast_Score=154, Evalue=1e-38, Organism=Drosophila melanogaster, GI24646216, Length=248, Percent_Identity=47.9838709677419, Blast_Score=243, Evalue=1e-64, Organism=Drosophila melanogaster, GI85725270, Length=253, Percent_Identity=48.2213438735178, Blast_Score=233, Evalue=1e-61, Organism=Drosophila melanogaster, GI85725272, Length=253, Percent_Identity=48.2213438735178, Blast_Score=233, Evalue=1e-61, Organism=Drosophila melanogaster, GI24650981, Length=253, Percent_Identity=48.2213438735178, Blast_Score=233, Evalue=1e-61, Organism=Drosophila melanogaster, GI28571817, Length=253, Percent_Identity=38.3399209486166, Blast_Score=160, Evalue=6e-40, Organism=Drosophila melanogaster, GI28571815, Length=253, Percent_Identity=38.3399209486166, Blast_Score=160, Evalue=6e-40, Organism=Drosophila melanogaster, GI24648979, Length=253, Percent_Identity=38.3399209486166, Blast_Score=160, Evalue=7e-40,
Paralogues:
None
Copy number: 960 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013078 - InterPro: IPR001345 - InterPro: IPR005952 [H]
Pfam domain/function: PF00300 PGAM [H]
EC number: =5.4.2.1 [H]
Molecular weight: Translated: 27231; Mature: 27100
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: PS00175 PG_MUTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGETATLVLLRHGESEWNSLNLFTGWVDVGLTDKGRAEAVRSGELLAEQGLLPDALYTSL CCCCEEEEEEECCCCCCCEEEEEEEEEEECCCCCCHHHHHHHCHHHHHCCCCCHHHHHHH LRRAITTAHLALDAADRLWIPVRRSWRLNERHYGALQGLDKAETKARYGEEQFMAWRRSY HHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHCCCHHHHHHHCCHHHHHHHHHCC DTPPPPIERGSTYSQDADPRYADIGGGPLTECLADVVVRFLPYFTDVIVPDLRSGKTVLI CCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE VAHGNSLRALVKHLDQMSDDDVVGLNIPTGIPLRYDLDARLRPLVPGGTYLDPEAAAAGA EECCCHHHHHHHHHHHCCCCCEEEEECCCCCCEEECCCCCCCCCCCCCCEECHHHHHHHH AAVASQGRG HHHHCCCCC >Mature Secondary Structure GETATLVLLRHGESEWNSLNLFTGWVDVGLTDKGRAEAVRSGELLAEQGLLPDALYTSL CCCEEEEEEECCCCCCCEEEEEEEEEEECCCCCCHHHHHHHCHHHHHCCCCCHHHHHHH LRRAITTAHLALDAADRLWIPVRRSWRLNERHYGALQGLDKAETKARYGEEQFMAWRRSY HHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHCCCHHHHHHHCCHHHHHHHHHCC DTPPPPIERGSTYSQDADPRYADIGGGPLTECLADVVVRFLPYFTDVIVPDLRSGKTVLI CCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE VAHGNSLRALVKHLDQMSDDDVVGLNIPTGIPLRYDLDARLRPLVPGGTYLDPEAAAAGA EECCCHHHHHHHHHHHCCCCCEEEEECCCCCCEEECCCCCCCCCCCCCCEECHHHHHHHH AAVASQGRG HHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA