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The map label for this gene is lpqM

Identifier: 41410006

GI number: 41410006

Start: 4371180

End: 4372625

Strand: Direct

Name: lpqM

Synonym: MAP3908

Alternate gene names: NA

Gene position: 4371180-4372625 (Clockwise)

Preceding gene: 41410005

Following gene: 41410017

Centisome position: 90.5

GC content: 67.08

Gene sequence:

>1446_bases
ATGCACAGCCACGCGCTCAGGTCGGCATTCGTGTGGGCCGCGGCGGTGTTGCTGGTGGCGGGTTGCTCGACGTTCGTCGA
GGGACGCGCGCTGTCGATGCTCAACGACCCGTTCCTGGTCGGTGGTCTGCCCGCGACCAACGGGCCCAGCGGCATCCGCT
CTAACGCACCCGCCCCCACCGGCAAGGTGCTCAACACCGACAACGGGTCGATCGACTCGCTGTCGTTGCTGTCGATCAAC
GACATCGAGGATTACTGGCGCTCGGTGTACGGCCAATCGCTGAAGGGCAAATTCGTTCCGATCAGCAAGATCGTGTCCTA
CAACTCGACCGATCCGAGCAGTCCGATCGTGTGCCACAACGACACCTACCAACTGGTCAACGCGTTCTACACGTCGCGGT
GCAACCTGATCGCCTGGGACCGCGGCGTTTTCATGCCGGTGGCGCAGAAGTATTTCGGCGACATGTCGGTGACCGGTGTG
CTGGCGCACGAATTCGGGCACGCGTTGCAGCAGATGGCCGCACTGGTGACCAAACGCGATGCGACCATCGTGCGCGAACA
GCAGGCCGACTGCTTCGCCGGGGTCTATCTGTTCTGGGTTGCCGACGGCAAGTCGCCGCGCTTCACGCTGAGCACCGCCG
ACGGGCTCGACCATGTGCTGGCCGGGATCATCACCACGCGCGACCCGGTGATGGACAGCGAGACCGCGAACGACGACGCG
CACGGCTCGGCGCTGGACCGGATCAGCGCCTTCCAAATGGGTTTCCTCAACGGCGCCTCGGCCTGTGCGTCGATCAACCG
CAGGGAAATCGAGCAGCGCCGCGGCGACCTGCCCAATGCCCTGCGGGTCGACACCAGCGGCGCACCGGAGACCGGCGAGG
TCCCGATCAACCAGGACACCTTGTCCACGTTGATGGAGCTGCTGGGAAAGATCTTCGCGCCGGCCAATCCGCCCGCGCTG
AGCTACCAACCGGCCGCATGCGCCGACGCCAAGCCCAGCCCGCCGGCGTCCTACTGCCCGGCCACCAACACCATCGCCGT
CGACCTGCCCAAGCTGGCCGCGCTGGGCAGGGTCGCCGACGAGAACGAACACAGCCTGCCCCAGGGCGACGACACCGCCC
TGTCCGTGGTGATGTCGCGCTACGCGCTGGCGGTACAGCATGAACGCGGCCTGGCCATGCAGAGCCCGTGGACCGCGCTG
CGGACCGCCTGCCTGACCGGCGTGGTGCACCGCAGGATGGCCGAGCCGATCGAGCTGCCCTCGCACAACCAATTGCTGCT
CACCGCAGGCGATCTCGACGAGGCGGTGGCCGGGCTGCTGACCAATCATCTGGTCGCCAGCGACGCCGACGGCACCAGCG
TGCCGGCGGGTTTCACCCGCATCGCGGCGTTCCGCGGCGGCGTGACCGGCAACGCGGACGCCTGCTACTCCCGGTATCCG
GGATAG

Upstream 100 bases:

>100_bases
GTTACGCCGGCACGCCGAAGGGTGAGAAATCGCGAGATCCCTTGAAGGGAGCCAGCGCCTTTCTTGCCCCCGGCGACGGC
CGGTCGCTCTACACTGAGCC

Downstream 100 bases:

>100_bases
CGAAAGCCGAACGCCATCAACCGATTTCGGCCAGCCGGGGGATCACCTCATCGCCCAGCCGGCGGATATAGCCGACGGGA
TCCGGATTGCCGGGCAGCGG

Product: LpqM

Products: NA

Alternate protein names: LpqM Protein; Metallopeptidase; Zinc Metallopeptidase; Neutral Zinc Metallopeptidase; Aminopeptidase; Metalloprotease; Lipoprotein; Metalloprotease-Like Protein

Number of amino acids: Translated: 481; Mature: 481

Protein sequence:

>481_residues
MHSHALRSAFVWAAAVLLVAGCSTFVEGRALSMLNDPFLVGGLPATNGPSGIRSNAPAPTGKVLNTDNGSIDSLSLLSIN
DIEDYWRSVYGQSLKGKFVPISKIVSYNSTDPSSPIVCHNDTYQLVNAFYTSRCNLIAWDRGVFMPVAQKYFGDMSVTGV
LAHEFGHALQQMAALVTKRDATIVREQQADCFAGVYLFWVADGKSPRFTLSTADGLDHVLAGIITTRDPVMDSETANDDA
HGSALDRISAFQMGFLNGASACASINRREIEQRRGDLPNALRVDTSGAPETGEVPINQDTLSTLMELLGKIFAPANPPAL
SYQPAACADAKPSPPASYCPATNTIAVDLPKLAALGRVADENEHSLPQGDDTALSVVMSRYALAVQHERGLAMQSPWTAL
RTACLTGVVHRRMAEPIELPSHNQLLLTAGDLDEAVAGLLTNHLVASDADGTSVPAGFTRIAAFRGGVTGNADACYSRYP
G

Sequences:

>Translated_481_residues
MHSHALRSAFVWAAAVLLVAGCSTFVEGRALSMLNDPFLVGGLPATNGPSGIRSNAPAPTGKVLNTDNGSIDSLSLLSIN
DIEDYWRSVYGQSLKGKFVPISKIVSYNSTDPSSPIVCHNDTYQLVNAFYTSRCNLIAWDRGVFMPVAQKYFGDMSVTGV
LAHEFGHALQQMAALVTKRDATIVREQQADCFAGVYLFWVADGKSPRFTLSTADGLDHVLAGIITTRDPVMDSETANDDA
HGSALDRISAFQMGFLNGASACASINRREIEQRRGDLPNALRVDTSGAPETGEVPINQDTLSTLMELLGKIFAPANPPAL
SYQPAACADAKPSPPASYCPATNTIAVDLPKLAALGRVADENEHSLPQGDDTALSVVMSRYALAVQHERGLAMQSPWTAL
RTACLTGVVHRRMAEPIELPSHNQLLLTAGDLDEAVAGLLTNHLVASDADGTSVPAGFTRIAAFRGGVTGNADACYSRYP
G
>Mature_481_residues
MHSHALRSAFVWAAAVLLVAGCSTFVEGRALSMLNDPFLVGGLPATNGPSGIRSNAPAPTGKVLNTDNGSIDSLSLLSIN
DIEDYWRSVYGQSLKGKFVPISKIVSYNSTDPSSPIVCHNDTYQLVNAFYTSRCNLIAWDRGVFMPVAQKYFGDMSVTGV
LAHEFGHALQQMAALVTKRDATIVREQQADCFAGVYLFWVADGKSPRFTLSTADGLDHVLAGIITTRDPVMDSETANDDA
HGSALDRISAFQMGFLNGASACASINRREIEQRRGDLPNALRVDTSGAPETGEVPINQDTLSTLMELLGKIFAPANPPAL
SYQPAACADAKPSPPASYCPATNTIAVDLPKLAALGRVADENEHSLPQGDDTALSVVMSRYALAVQHERGLAMQSPWTAL
RTACLTGVVHRRMAEPIELPSHNQLLLTAGDLDEAVAGLLTNHLVASDADGTSVPAGFTRIAAFRGGVTGNADACYSRYP
G

Specific function: Unknown

COG id: COG2321

COG function: function code R; Predicted metalloprotease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51135; Mature: 51135

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHSHALRSAFVWAAAVLLVAGCSTFVEGRALSMLNDPFLVGGLPATNGPSGIRSNAPAPT
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCEEEECCCCCCCCCCCCCCCCCCC
GKVLNTDNGSIDSLSLLSINDIEDYWRSVYGQSLKGKFVPISKIVSYNSTDPSSPIVCHN
CCEEECCCCCCCCEEEEEEHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCEEECC
DTYQLVNAFYTSRCNLIAWDRGVFMPVAQKYFGDMSVTGVLAHEFGHALQQMAALVTKRD
CHHHHHHHHHHCCCCEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
ATIVREQQADCFAGVYLFWVADGKSPRFTLSTADGLDHVLAGIITTRDPVMDSETANDDA
HHHHHHHHHHHHEEEEEEEEECCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCC
HGSALDRISAFQMGFLNGASACASINRREIEQRRGDLPNALRVDTSGAPETGEVPINQDT
CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCHHH
LSTLMELLGKIFAPANPPALSYQPAACADAKPSPPASYCPATNTIAVDLPKLAALGRVAD
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHCC
ENEHSLPQGDDTALSVVMSRYALAVQHERGLAMQSPWTALRTACLTGVVHRRMAEPIELP
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
SHNQLLLTAGDLDEAVAGLLTNHLVASDADGTSVPAGFTRIAAFRGGVTGNADACYSRYP
CCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHCCC
G
C
>Mature Secondary Structure
MHSHALRSAFVWAAAVLLVAGCSTFVEGRALSMLNDPFLVGGLPATNGPSGIRSNAPAPT
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCEEEECCCCCCCCCCCCCCCCCCC
GKVLNTDNGSIDSLSLLSINDIEDYWRSVYGQSLKGKFVPISKIVSYNSTDPSSPIVCHN
CCEEECCCCCCCCEEEEEEHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCEEECC
DTYQLVNAFYTSRCNLIAWDRGVFMPVAQKYFGDMSVTGVLAHEFGHALQQMAALVTKRD
CHHHHHHHHHHCCCCEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
ATIVREQQADCFAGVYLFWVADGKSPRFTLSTADGLDHVLAGIITTRDPVMDSETANDDA
HHHHHHHHHHHHEEEEEEEEECCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCC
HGSALDRISAFQMGFLNGASACASINRREIEQRRGDLPNALRVDTSGAPETGEVPINQDT
CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCHHH
LSTLMELLGKIFAPANPPALSYQPAACADAKPSPPASYCPATNTIAVDLPKLAALGRVAD
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHCC
ENEHSLPQGDDTALSVVMSRYALAVQHERGLAMQSPWTALRTACLTGVVHRRMAEPIELP
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
SHNQLLLTAGDLDEAVAGLLTNHLVASDADGTSVPAGFTRIAAFRGGVTGNADACYSRYP
CCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHCCC
G
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA