| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409979
Identifier: 41409979
GI number: 41409979
Start: 4342547
End: 4343437
Strand: Direct
Name: 41409979
Synonym: MAP3881
Alternate gene names: NA
Gene position: 4342547-4343437 (Clockwise)
Preceding gene: 41409978
Following gene: 41409980
Centisome position: 89.91
GC content: 73.63
Gene sequence:
>891_bases ATGGCAGCGACAGCCGAGGTGGGGGTGACCGCAACCTTGGGCGCCGCCGCCCGGGCCGTCGCCACCCGGCAGGGGTTGCT CAACGACCCGTACGCCGAGCCGCTGCTGGGAGCCGTCGGCATCGACTACCTCACCCGCGCGATCGCCGACCACACGTTCG CGGCCGATGAATCGCCGGTCGGCGACGACCCGGCGGTGACGTCGCTGCTGGATGCGCTGGCCGCCCACACCCGGTTCGTG GACGAATTCCTCGCCGAGGCGGGCCGCGCGGGCATTCGCCAGGTGGTGATCCTGGCATCGGGCCTGGACACCCGGCCGTA CCGGCTGTGGTGGCCGCGCGGGACCACGGTCTACGAGATCGACCGGCCGCGGGTGCTCGATTTCAAGGCCGGGGTGCTGC GCGGGCTGGACGCCCGGCTGGCCACCAACCGGTGCGCGGTCGGCATCGACCTGCGCGACGACTGGCCGGCGGCGTTGCGG CGGGTGGGTTTCGACGCGGCCCAGCCCACGGCGTGGGTCGCCGAGCAGCTGCTGGTCGGCTACCTGAAGCCCGCCGAACA GAACCGGCTGCTGCGCCGGCTCACCGCGGCCAGCGCCGCGGGCAGCCGGTTGGCCGCCGACCACCTGCCCACCTGGGATC CGCTGCAGCTGGAGGCCGAGCGGGCCTTCGTGGAGGGCTGGCGGCGCCGCGGCCTGGACATCGACCTGGCCAGCCTCACC CACCTGGGCGAATACCATTACGTCCCTGAGTATTTGGCGACCCACGGCTGGGAGCCGGCGGCGCGGTCCATCGCCGATCT GCTGGGCGGCCTGGGGTTGGGGCCGCGGCGGGGCGCCGGATCCGGCGGCGCGCAGTTCATTCCGGAATACGTCACCGCGA CCCGCGTTTGA
Upstream 100 bases:
>100_bases GCCTCGACGGTCACCGCGCTGGTGTTGCTCGGCTGGCGGGTGGCCGCCGGGCTGACCCTGCGGCGCCGCTCCGACGCCTG AGACGACGCCCGGGACGACG
Downstream 100 bases:
>100_bases GTGTGTCGATGACCCCCGAATCCAGCCCGCCGGCCGACGGCCGACTGCGGTTCGTGCCGGCCACGCACGACGACCCGCTG GCCCGGCCGCTGCTGGCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 296; Mature: 295
Protein sequence:
>296_residues MAATAEVGVTATLGAAARAVATRQGLLNDPYAEPLLGAVGIDYLTRAIADHTFAADESPVGDDPAVTSLLDALAAHTRFV DEFLAEAGRAGIRQVVILASGLDTRPYRLWWPRGTTVYEIDRPRVLDFKAGVLRGLDARLATNRCAVGIDLRDDWPAALR RVGFDAAQPTAWVAEQLLVGYLKPAEQNRLLRRLTAASAAGSRLAADHLPTWDPLQLEAERAFVEGWRRRGLDIDLASLT HLGEYHYVPEYLATHGWEPAARSIADLLGGLGLGPRRGAGSGGAQFIPEYVTATRV
Sequences:
>Translated_296_residues MAATAEVGVTATLGAAARAVATRQGLLNDPYAEPLLGAVGIDYLTRAIADHTFAADESPVGDDPAVTSLLDALAAHTRFV DEFLAEAGRAGIRQVVILASGLDTRPYRLWWPRGTTVYEIDRPRVLDFKAGVLRGLDARLATNRCAVGIDLRDDWPAALR RVGFDAAQPTAWVAEQLLVGYLKPAEQNRLLRRLTAASAAGSRLAADHLPTWDPLQLEAERAFVEGWRRRGLDIDLASLT HLGEYHYVPEYLATHGWEPAARSIADLLGGLGLGPRRGAGSGGAQFIPEYVTATRV >Mature_295_residues AATAEVGVTATLGAAARAVATRQGLLNDPYAEPLLGAVGIDYLTRAIADHTFAADESPVGDDPAVTSLLDALAAHTRFVD EFLAEAGRAGIRQVVILASGLDTRPYRLWWPRGTTVYEIDRPRVLDFKAGVLRGLDARLATNRCAVGIDLRDDWPAALRR VGFDAAQPTAWVAEQLLVGYLKPAEQNRLLRRLTAASAAGSRLAADHLPTWDPLQLEAERAFVEGWRRRGLDIDLASLTH LGEYHYVPEYLATHGWEPAARSIADLLGGLGLGPRRGAGSGGAQFIPEYVTATRV
Specific function: Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0677 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y3881_MYCPA (Q73T38)
Other databases:
- EMBL: AE016958 - RefSeq: NP_962815.1 - ProteinModelPortal: Q73T38 - SMR: Q73T38 - EnsemblBacteria: EBMYCT00000036515 - GeneID: 2720149 - GenomeReviews: AE016958_GR - KEGG: mpa:MAP3881 - NMPDR: fig|262316.1.peg.3881 - GeneTree: EBGT00050000015698 - HOGENOM: HBG570783 - OMA: YLATHGW - ProtClustDB: CLSK763745 - InterPro: IPR011610 - InterPro: IPR007213 - TIGRFAMs: TIGR00027
Pfam domain/function: PF04072 LCM
EC number: NA
Molecular weight: Translated: 31880; Mature: 31749
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: NA
Important sites: BINDING 121-121
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAATAEVGVTATLGAAARAVATRQGLLNDPYAEPLLGAVGIDYLTRAIADHTFAADESPV CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC GDDPAVTSLLDALAAHTRFVDEFLAEAGRAGIRQVVILASGLDTRPYRLWWPRGTTVYEI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHEECCCCCCCEEEECCCCCEEEEC DRPRVLDFKAGVLRGLDARLATNRCAVGIDLRDDWPAALRRVGFDAAQPTAWVAEQLLVG CCCEEECHHHHHHHCCHHHHHCCCEEEEECCCCCHHHHHHHHCCCCCCCHHHHHHHHHHH YLKPAEQNRLLRRLTAASAAGSRLAADHLPTWDPLQLEAERAFVEGWRRRGLDIDLASLT HCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHH HLGEYHYVPEYLATHGWEPAARSIADLLGGLGLGPRRGAGSGGAQFIPEYVTATRV HHHCHHCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure AATAEVGVTATLGAAARAVATRQGLLNDPYAEPLLGAVGIDYLTRAIADHTFAADESPV CCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC GDDPAVTSLLDALAAHTRFVDEFLAEAGRAGIRQVVILASGLDTRPYRLWWPRGTTVYEI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHEECCCCCCCEEEECCCCCEEEEC DRPRVLDFKAGVLRGLDARLATNRCAVGIDLRDDWPAALRRVGFDAAQPTAWVAEQLLVG CCCEEECHHHHHHHCCHHHHHCCCEEEEECCCCCHHHHHHHHCCCCCCCHHHHHHHHHHH YLKPAEQNRLLRRLTAASAAGSRLAADHLPTWDPLQLEAERAFVEGWRRRGLDIDLASLT HCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHH HLGEYHYVPEYLATHGWEPAARSIADLLGGLGLGPRRGAGSGGAQFIPEYVTATRV HHHCHHCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA