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The map label for this gene is 41409978

Identifier: 41409978

GI number: 41409978

Start: 4342156

End: 4342527

Strand: Direct

Name: 41409978

Synonym: MAP3880

Alternate gene names: NA

Gene position: 4342156-4342527 (Clockwise)

Preceding gene: 41409971

Following gene: 41409979

Centisome position: 89.9

GC content: 73.12

Gene sequence:

>372_bases
ATGCTTAGGCTCCGGCGGCTGGCCTGGTTCGCGGTCGATGTCCTCGGCGTGCTGGTGTTCTGCGCCGTGGGGCGGCGCAG
TCACGACGAGGGCCTCAGTGCCACCGGCGTCGCCGTGACGGCGTGGCCGTTTCTGACCGGCACCGCGCTCGGCTGGCTGG
TCTCCCGGGGATGGCGGCAGCCCACCGCGGTGCTGCCCACCGGCGTCGTCGTCTGGCTGTGCACCGTGATCGTCGGCATG
TTGCTGCGCAAGGCCAGCTCCGCCGGTGTGGCGGCCAGTTTCGTGGTGGTGGCCTCGACGGTCACCGCGCTGGTGTTGCT
CGGCTGGCGGGTGGCCGCCGGGCTGACCCTGCGGCGCCGCTCCGACGCCTGA

Upstream 100 bases:

>100_bases
GCGAGGCGGCGGTGTGAATGAGTATTCATTGCAGACGAATCTAGGTTCACCTCGGTTGCCGGGTCAAGGATCGGCGCGGC
CGAGCGGGTAGTCTCGCTGC

Downstream 100 bases:

>100_bases
GACGACGCCCGGGACGACGATGGCAGCGACAGCCGAGGTGGGGGTGACCGCAACCTTGGGCGCCGCCGCCCGGGCCGTCG
CCACCCGGCAGGGGTTGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: Integral Membrane Protein

Number of amino acids: Translated: 123; Mature: 123

Protein sequence:

>123_residues
MLRLRRLAWFAVDVLGVLVFCAVGRRSHDEGLSATGVAVTAWPFLTGTALGWLVSRGWRQPTAVLPTGVVVWLCTVIVGM
LLRKASSAGVAASFVVVASTVTALVLLGWRVAAGLTLRRRSDA

Sequences:

>Translated_123_residues
MLRLRRLAWFAVDVLGVLVFCAVGRRSHDEGLSATGVAVTAWPFLTGTALGWLVSRGWRQPTAVLPTGVVVWLCTVIVGM
LLRKASSAGVAASFVVVASTVTALVLLGWRVAAGLTLRRRSDA
>Mature_123_residues
MLRLRRLAWFAVDVLGVLVFCAVGRRSHDEGLSATGVAVTAWPFLTGTALGWLVSRGWRQPTAVLPTGVVVWLCTVIVGM
LLRKASSAGVAASFVVVASTVTALVLLGWRVAAGLTLRRRSDA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13059; Mature: 13059

Theoretical pI: Translated: 12.36; Mature: 12.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRLRRLAWFAVDVLGVLVFCAVGRRSHDEGLSATGVAVTAWPFLTGTALGWLVSRGWRQ
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
PTAVLPTGVVVWLCTVIVGMLLRKASSAGVAASFVVVASTVTALVLLGWRVAAGLTLRRR
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCC
SDA
CCC
>Mature Secondary Structure
MLRLRRLAWFAVDVLGVLVFCAVGRRSHDEGLSATGVAVTAWPFLTGTALGWLVSRGWRQ
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
PTAVLPTGVVVWLCTVIVGMLLRKASSAGVAASFVVVASTVTALVLLGWRVAAGLTLRRR
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCC
SDA
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA