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The map label for this gene is 41409956

Identifier: 41409956

GI number: 41409956

Start: 4320380

End: 4321291

Strand: Direct

Name: 41409956

Synonym: MAP3858

Alternate gene names: NA

Gene position: 4320380-4321291 (Clockwise)

Preceding gene: 41409955

Following gene: 41409957

Centisome position: 89.45

GC content: 72.48

Gene sequence:

>912_bases
TTGCATTGCTGCGCAAGGCTTCTCGCGATAGTGGCCTGCCTGCTGGCCTGCGTGACGGCCTGCTCGAACCCCCACCCCGC
GGCGCGCCCGTACGGCGCCCAAGGGGCGCGGCTCGGCGAGTCGCTGGCGCTGCTGGGCTGGAACATGTCGGTGTCGAACC
TGCGCTGGGACGGCGACTACGTCCTGGTCGACGTCGACGCCAGCCCGGCCTCGGCCAAGGGCCCGCACGCCAAACCCGAG
GACATCCGGTTCGGGCTGTACGGCGCCCTGGCCCACCCGATGGAGGCGACCGGCCTGGGCAGCTGCGACAGCACCACGAC
CAGCCTGCACGACGTCCCCGCGCCGCTGTCCGCGCCGCCCGACCGGCTCACCGGCACGGTTTGCCTTGGGCCGCTGAAGG
ATCGCAGTCAGGTTCGCGGTGTCTACGGCTACTCGCCGCGCGACCGCATCCCCAACAGCTCGTCGGCCTACCCGGTCGCC
TTCCCGGTGGGACTGCTGCCGACGAACCCCAACGACAGCGGCGGCCTGGCGGTCAAGACGGCCAGCCTGTCCGCGTGGCG
GGCCGACGGCACGCCGGTGACCAAGGCGCAGCTCGGCGATCCGGGAGCGTTCACCGGCAACGGCTACATGCTGCTGGGGT
TGGAGGCCACCGCCGTGGCGGCCCGCTATCGCGACGAGTCGGTCCAGCGCGGCGGCCCGATGATGCTGCTGGCCTCGCCG
ACGCTGCCCGGCCGGGGCCTGAACCCGGCCTGCGCGGCGTACGGGTCGTCGGTGCTGATCCTGCCCGACGCCTCGCTGGA
CGCGGTGCACGTGAACGCGTCGCTGTGCACGCAGGGCGAGATCAACGACGCGCTGCTGTATGCGACGCTGGCCATCGACG
GCACCCACGCCGGGGTGTGGACGCAGCGATGA

Upstream 100 bases:

>100_bases
CACCGTGGTGGACCGCGCCACCGGCGCCGCCGAGGCCATCGAGGCCGAGGGGCTGCCCTACCGCAGCGTGCTCGGTCTCG
CCGATCTGGGGCTGGGCTAA

Downstream 100 bases:

>100_bases
GCGAACCGGGGCCCACCGAATGGTCCGCGACGCCGTCCGCCGGCGTCGGGCCGTGGCGCGGCGAGCTTCCCGACGACCCG
CGCTATGACCCAATCCTGTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MHCCARLLAIVACLLACVTACSNPHPAARPYGAQGARLGESLALLGWNMSVSNLRWDGDYVLVDVDASPASAKGPHAKPE
DIRFGLYGALAHPMEATGLGSCDSTTTSLHDVPAPLSAPPDRLTGTVCLGPLKDRSQVRGVYGYSPRDRIPNSSSAYPVA
FPVGLLPTNPNDSGGLAVKTASLSAWRADGTPVTKAQLGDPGAFTGNGYMLLGLEATAVAARYRDESVQRGGPMMLLASP
TLPGRGLNPACAAYGSSVLILPDASLDAVHVNASLCTQGEINDALLYATLAIDGTHAGVWTQR

Sequences:

>Translated_303_residues
MHCCARLLAIVACLLACVTACSNPHPAARPYGAQGARLGESLALLGWNMSVSNLRWDGDYVLVDVDASPASAKGPHAKPE
DIRFGLYGALAHPMEATGLGSCDSTTTSLHDVPAPLSAPPDRLTGTVCLGPLKDRSQVRGVYGYSPRDRIPNSSSAYPVA
FPVGLLPTNPNDSGGLAVKTASLSAWRADGTPVTKAQLGDPGAFTGNGYMLLGLEATAVAARYRDESVQRGGPMMLLASP
TLPGRGLNPACAAYGSSVLILPDASLDAVHVNASLCTQGEINDALLYATLAIDGTHAGVWTQR
>Mature_303_residues
MHCCARLLAIVACLLACVTACSNPHPAARPYGAQGARLGESLALLGWNMSVSNLRWDGDYVLVDVDASPASAKGPHAKPE
DIRFGLYGALAHPMEATGLGSCDSTTTSLHDVPAPLSAPPDRLTGTVCLGPLKDRSQVRGVYGYSPRDRIPNSSSAYPVA
FPVGLLPTNPNDSGGLAVKTASLSAWRADGTPVTKAQLGDPGAFTGNGYMLLGLEATAVAARYRDESVQRGGPMMLLASP
TLPGRGLNPACAAYGSSVLILPDASLDAVHVNASLCTQGEINDALLYATLAIDGTHAGVWTQR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31348; Mature: 31348

Theoretical pI: Translated: 6.61; Mature: 6.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHCCARLLAIVACLLACVTACSNPHPAARPYGAQGARLGESLALLGWNMSVSNLRWDGDY
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEECCCE
VLVDVDASPASAKGPHAKPEDIRFGLYGALAHPMEATGLGSCDSTTTSLHDVPAPLSAPP
EEEEECCCCCCCCCCCCCCCCEEEEEHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DRLTGTVCLGPLKDRSQVRGVYGYSPRDRIPNSSSAYPVAFPVGLLPTNPNDSGGLAVKT
CCCEEEEEECCCCCHHHCCEECCCCCHHCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEE
ASLSAWRADGTPVTKAQLGDPGAFTGNGYMLLGLEATAVAARYRDESVQRGGPMMLLASP
ECCEEEECCCCCEEHEECCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCEEEEECC
TLPGRGLNPACAAYGSSVLILPDASLDAVHVNASLCTQGEINDALLYATLAIDGTHAGVW
CCCCCCCCHHHHHCCCEEEEEECCCCCEEEECCEEECCCCCCCEEEEEEEEECCCCCCCC
TQR
CCC
>Mature Secondary Structure
MHCCARLLAIVACLLACVTACSNPHPAARPYGAQGARLGESLALLGWNMSVSNLRWDGDY
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEECCCE
VLVDVDASPASAKGPHAKPEDIRFGLYGALAHPMEATGLGSCDSTTTSLHDVPAPLSAPP
EEEEECCCCCCCCCCCCCCCCEEEEEHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DRLTGTVCLGPLKDRSQVRGVYGYSPRDRIPNSSSAYPVAFPVGLLPTNPNDSGGLAVKT
CCCEEEEEECCCCCHHHCCEECCCCCHHCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEE
ASLSAWRADGTPVTKAQLGDPGAFTGNGYMLLGLEATAVAARYRDESVQRGGPMMLLASP
ECCEEEECCCCCEEHEECCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCEEEEECC
TLPGRGLNPACAAYGSSVLILPDASLDAVHVNASLCTQGEINDALLYATLAIDGTHAGVW
CCCCCCCCHHHHHCCCEEEEEECCCCCEEEECCEEECCCCCCCEEEEEEEEECCCCCCCC
TQR
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA