| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409945
Identifier: 41409945
GI number: 41409945
Start: 4306674
End: 4306943
Strand: Direct
Name: 41409945
Synonym: MAP3847
Alternate gene names: NA
Gene position: 4306674-4306943 (Clockwise)
Preceding gene: 41409944
Following gene: 41409946
Centisome position: 89.17
GC content: 72.22
Gene sequence:
>270_bases ATGACGCTCACCGATCCCCGCGACGCGCTCGCCGACCAGAGCGACTTCATCGGCTATCTGGTCGGCCTCGCAGGGCTGGC CGACGTGGTGCACACCCTGGCCGGCGACGGCCCCCGCGCCGCCGCGGATCCCCGCGCCCCCGACGACTTCGTGCACCTGC TGCTCGGCGTGGCGAGCGTCGGTGCGGGGATCGCGCGGCTGGCCGATAGTACTGTGGCACAGTCTTTTCCGGCCGCCGGG ATGGCATCGACCGCGCGGTGGTTGCGATGA
Upstream 100 bases:
>100_bases ACGCCAGCCCGGACGCCTGGGCGGACCTGCTGGCGGACGCGTTCATCGGGCACGGGCTGGACGATGCTGTGCTGGCTCGG CTGCGGCCCGAGGGGTACGC
Downstream 100 bases:
>100_bases GCACGGTCCTGGCCCGCAGCGACTTCCTGCGCGCCCCGATGTTGGCCACCGCCCGGCCTGCGGGTTTCAAGGAGTGGCAT CACTTCGTGGTGCACGGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 89; Mature: 88
Protein sequence:
>89_residues MTLTDPRDALADQSDFIGYLVGLAGLADVVHTLAGDGPRAAADPRAPDDFVHLLLGVASVGAGIARLADSTVAQSFPAAG MASTARWLR
Sequences:
>Translated_89_residues MTLTDPRDALADQSDFIGYLVGLAGLADVVHTLAGDGPRAAADPRAPDDFVHLLLGVASVGAGIARLADSTVAQSFPAAG MASTARWLR >Mature_88_residues TLTDPRDALADQSDFIGYLVGLAGLADVVHTLAGDGPRAAADPRAPDDFVHLLLGVASVGAGIARLADSTVAQSFPAAGM ASTARWLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9074; Mature: 8943
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLTDPRDALADQSDFIGYLVGLAGLADVVHTLAGDGPRAAADPRAPDDFVHLLLGVASV CCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH GAGIARLADSTVAQSFPAAGMASTARWLR HHHHHHHHHHHHHHHCCCCCHHHHHHHCC >Mature Secondary Structure TLTDPRDALADQSDFIGYLVGLAGLADVVHTLAGDGPRAAADPRAPDDFVHLLLGVASV CCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH GAGIARLADSTVAQSFPAAGMASTARWLR HHHHHHHHHHHHHHHCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA