Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

Click here to switch to the map view.

The map label for this gene is 41409820

Identifier: 41409820

GI number: 41409820

Start: 4142007

End: 4143152

Strand: Direct

Name: 41409820

Synonym: MAP3722

Alternate gene names: NA

Gene position: 4142007-4143152 (Clockwise)

Preceding gene: 41409819

Following gene: 41409822

Centisome position: 85.76

GC content: 74.0

Gene sequence:

>1146_bases
GTGCTCCCCCTTGGAGATCGTCGCGCCGCCGCGGGAGCGCGAGGACATCGACGCGTGGCTCGACGAGCAGACCCACAAGC
GGCCGGACGCCGAGCGCGGGCCCGGATGGCACTTGGCGATGCTCCCGCTGACCGACGGCGGCGCGGTGGTGAGCCTGGTC
ACCACGCACTGCCTCACCGATGGCGTCGGGCTGTGCGAGGCCCTGGCCGACGCGGCTCGGGGACGCGGCGACCGGACCCG
CTGGCCCGCCGCGGGAGGTCGGCGGCGCTGGCAAGCCCTGCGCGAGGACGCGCGCCAAACCGCGCACGACGCGCTCGATG
TCGGCCGCGCCGTCGGTGCCGCGGCCCGGATGCTCCGGCAGGGCCGCGACGGCACCGCGTCCGTCGCCCCGCCACGCGGG
AAGCGGCCCGCGCCGCCGGCCGCGCCCGACGACCGCATTGCCCTGCCGATGGAGACGATCTTCGTCAGCGCCGACGACTG
GGACGCGCGCGCAACCGCCTTGGGCGGCACCAGCAACGCGCTGCTCGCCGGGTTGGCGGGCCACCTCGCCCAGCGGGTGG
GGCGGGTGGCCCCCGACGGCTCGGTCAACATCGGCATGCCCGTCAACGAGCGCGCCCCAAGCGACACGCGCGCCAACGCG
GTCACGAACGTCGACGTCACGCTGGGGTCCGCGGCGATCACCACGGACCTGCGCGAGATCCGCGCCGCCATCAAGCGGGC
GCTGGTTCGCCATCACGACGAGCCCGACGAGCGGTGGGCGCTGCTGCCCCTCGTCCCGCTGATCCCGAAGCCGGTGTTTC
GGCGGTTGCTCAGCGTGGTCACCGGCGGCGCGGCGACCGTGGTGTCGTCCAATCTCGGCGCGCTCGACCCGGCCGCCAAC
CGGCCGGACGGCACGGACGCCGACTACTTCGCCATGAAGTCGGTGTACCCGGGCGTGACCGCCGCGACGATGCACCGCAC
CAACGGGGCCCTGGCGTTGCTGTCGGGGCGGGTCCACGGCCGGGTCTTCATCTCGGTCCTCGCCTACGAATTGGGCCGCC
ACAATTCGAACGAGGGTCTGCGACAAGCGCTTTCCAAGACGCTGAGCGACTTCTCGCTGGCCGCCACAACGGGCTGGCAC
ACGGTCTGCCCCGTGTGAGGCGCTAG

Upstream 100 bases:

>100_bases
TGCGTGAGTTCCACCGCCACCTCGGGCGGGGGCGGCTGTCACGGCGAGTCGAGCGCTCCGCCTTGCCGTTTGGCCGTCAT
CGCTGGGTGGCGGCCGCCGA

Downstream 100 bases:

>100_bases
GCCTCGGCCCGTGTTTCGGTGAGCCGGTAGAGGTTTGGCTCGGCAAGCTCGTCGAGCAGGGCGGCCAGGTGATCGACGAG
CTCATCCGGTTCGAGCCGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 381; Mature: 381

Protein sequence:

>381_residues
MLPLGDRRAAAGARGHRRVARRADPQAAGRRARARMALGDAPADRRRRGGEPGHHALPHRWRRAVRGPGRRGSGTRRPDP
LARRGRSAALASPARGRAPNRARRARCRPRRRCRGPDAPAGPRRHRVRRPATREAARAAGRARRPHCPADGDDLRQRRRL
GRARNRLGRHQQRAARRVGGPPRPAGGAGGPRRLGQHRHARQRARPKRHARQRGHERRRHAGVRGDHHGPARDPRRHQAG
AGSPSRRARRAVGAAAPRPADPEAGVSAVAQRGHRRRGDRGVVQSRRARPGRQPAGRHGRRLLRHEVGVPGRDRRDDAPH
QRGPGVAVGAGPRPGLHLGPRLRIGPPQFERGSATSAFQDAERLLAGRHNGLAHGLPRVRR

Sequences:

>Translated_381_residues
MLPLGDRRAAAGARGHRRVARRADPQAAGRRARARMALGDAPADRRRRGGEPGHHALPHRWRRAVRGPGRRGSGTRRPDP
LARRGRSAALASPARGRAPNRARRARCRPRRRCRGPDAPAGPRRHRVRRPATREAARAAGRARRPHCPADGDDLRQRRRL
GRARNRLGRHQQRAARRVGGPPRPAGGAGGPRRLGQHRHARQRARPKRHARQRGHERRRHAGVRGDHHGPARDPRRHQAG
AGSPSRRARRAVGAAAPRPADPEAGVSAVAQRGHRRRGDRGVVQSRRARPGRQPAGRHGRRLLRHEVGVPGRDRRDDAPH
QRGPGVAVGAGPRPGLHLGPRLRIGPPQFERGSATSAFQDAERLLAGRHNGLAHGLPRVRR
>Mature_381_residues
MLPLGDRRAAAGARGHRRVARRADPQAAGRRARARMALGDAPADRRRRGGEPGHHALPHRWRRAVRGPGRRGSGTRRPDP
LARRGRSAALASPARGRAPNRARRARCRPRRRCRGPDAPAGPRRHRVRRPATREAARAAGRARRPHCPADGDDLRQRRRL
GRARNRLGRHQQRAARRVGGPPRPAGGAGGPRRLGQHRHARQRARPKRHARQRGHERRRHAGVRGDHHGPARDPRRHQAG
AGSPSRRARRAVGAAAPRPADPEAGVSAVAQRGHRRRGDRGVVQSRRARPGRQPAGRHGRRLLRHEVGVPGRDRRDDAPH
QRGPGVAVGAGPRPGLHLGPRLRIGPPQFERGSATSAFQDAERLLAGRHNGLAHGLPRVRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41952; Mature: 41952

Theoretical pI: Translated: 12.95; Mature: 12.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPLGDRRAAAGARGHRRVARRADPQAAGRRARARMALGDAPADRRRRGGEPGHHALPHR
CCCCCCCHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCHHHHH
WRRAVRGPGRRGSGTRRPDPLARRGRSAALASPARGRAPNRARRARCRPRRRCRGPDAPA
HHHHHCCCCCCCCCCCCCCHHHHCCCHHHHCCCCCCCCCCHHHHHHCCHHHHCCCCCCCC
GPRRHRVRRPATREAARAAGRARRPHCPADGDDLRQRRRLGRARNRLGRHQQRAARRVGG
CCHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PPRPAGGAGGPRRLGQHRHARQRARPKRHARQRGHERRRHAGVRGDHHGPARDPRRHQAG
CCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCC
AGSPSRRARRAVGAAAPRPADPEAGVSAVAQRGHRRRGDRGVVQSRRARPGRQPAGRHGR
CCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHH
RLLRHEVGVPGRDRRDDAPHQRGPGVAVGAGPRPGLHLGPRLRIGPPQFERGSATSAFQD
HHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
AERLLAGRHNGLAHGLPRVRR
HHHHHHHCCCCHHHCCHHHCC
>Mature Secondary Structure
MLPLGDRRAAAGARGHRRVARRADPQAAGRRARARMALGDAPADRRRRGGEPGHHALPHR
CCCCCCCHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCHHHHH
WRRAVRGPGRRGSGTRRPDPLARRGRSAALASPARGRAPNRARRARCRPRRRCRGPDAPA
HHHHHCCCCCCCCCCCCCCHHHHCCCHHHHCCCCCCCCCCHHHHHHCCHHHHCCCCCCCC
GPRRHRVRRPATREAARAAGRARRPHCPADGDDLRQRRRLGRARNRLGRHQQRAARRVGG
CCHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PPRPAGGAGGPRRLGQHRHARQRARPKRHARQRGHERRRHAGVRGDHHGPARDPRRHQAG
CCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCC
AGSPSRRARRAVGAAAPRPADPEAGVSAVAQRGHRRRGDRGVVQSRRARPGRQPAGRHGR
CCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHH
RLLRHEVGVPGRDRRDDAPHQRGPGVAVGAGPRPGLHLGPRLRIGPPQFERGSATSAFQD
HHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
AERLLAGRHNGLAHGLPRVRR
HHHHHHHCCCCHHHCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA