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The map label for this gene is 41409769

Identifier: 41409769

GI number: 41409769

Start: 4079497

End: 4080180

Strand: Direct

Name: 41409769

Synonym: MAP3671

Alternate gene names: NA

Gene position: 4079497-4080180 (Clockwise)

Preceding gene: 41409768

Following gene: 41409770

Centisome position: 84.47

GC content: 71.05

Gene sequence:

>684_bases
TTGCCCACGGTCACTTGGGCGCGCGTCGACCCGGCTCGACGCGCGGCGATCATCGAGGCCGCGGAGTCGGAATTCGGCGC
GCACGGATTCTCCCGCGGCAGCCTGAACGTCATCGCCCGCAAGGCCGGCGTGGCCAAGGGCAGCCTGTTCCAGTACTTCG
CCGACAAGCGCGACCTGTATGCGTTCATCGCCGACATCGGCAGCCAGCGGGTCCGCGGCTACATCGAGCAGCTGATCCGC
GAGCTCGACCCGGCCCGGCCGTTCTTCGAATTCCTCACCGACCTGCTCGACGGGTGGGTGGCCTACTTCGCCGACCACCC
GCACGAGCGGGCGCTGCACGCCGCGGCCACGCTGGAAGTCGACACTGAGGCCCGGATCAGCGTGCAGAACGTCATCCACC
GCCACTACCTGGAGGTGCTGCGGCCGCTGGTGCGCGACGCCCGGCTGCGCGGCGACCTGCGCGCCGACTCGGACACCGAC
GCGCTGTTGTCGTTGCTGCTGCTGATCTTCCCGCACCTGGCGCTGGCCCCCTACATGCGCGGACTGGATCCGGTGCTCGG
GCTCGACGAGCCCACCCCCGAGCAGCCCGCGCTGGCGGTGCGCCGGCTGGTCGCGGTGCTGGCCGCCGCGTTCTCGCCCG
CGCCGGCCCACTTTGCCACCCCACGATCCGAGGAGGTCACATGA

Upstream 100 bases:

>100_bases
GCGCAGGGCCGGGCGGCAAGACGCTCGGCGCCGCACCCCCCCTTGACTGTGAGATTGCTCACAGTAGGATGACCAGTGGT
CATTCAGATAGGAGGCGGCA

Downstream 100 bases:

>100_bases
ACCGAACCCGAAGCGCCTCGATGGCGCAGGGGGGTCTCAACTGGGACAGCTTGCCGCTCAAGCTTTTTGCGGGCGGCAAC
GCGAAATTCTGGAATCCTGC

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator

Number of amino acids: Translated: 227; Mature: 226

Protein sequence:

>227_residues
MPTVTWARVDPARRAAIIEAAESEFGAHGFSRGSLNVIARKAGVAKGSLFQYFADKRDLYAFIADIGSQRVRGYIEQLIR
ELDPARPFFEFLTDLLDGWVAYFADHPHERALHAAATLEVDTEARISVQNVIHRHYLEVLRPLVRDARLRGDLRADSDTD
ALLSLLLLIFPHLALAPYMRGLDPVLGLDEPTPEQPALAVRRLVAVLAAAFSPAPAHFATPRSEEVT

Sequences:

>Translated_227_residues
MPTVTWARVDPARRAAIIEAAESEFGAHGFSRGSLNVIARKAGVAKGSLFQYFADKRDLYAFIADIGSQRVRGYIEQLIR
ELDPARPFFEFLTDLLDGWVAYFADHPHERALHAAATLEVDTEARISVQNVIHRHYLEVLRPLVRDARLRGDLRADSDTD
ALLSLLLLIFPHLALAPYMRGLDPVLGLDEPTPEQPALAVRRLVAVLAAAFSPAPAHFATPRSEEVT
>Mature_226_residues
PTVTWARVDPARRAAIIEAAESEFGAHGFSRGSLNVIARKAGVAKGSLFQYFADKRDLYAFIADIGSQRVRGYIEQLIRE
LDPARPFFEFLTDLLDGWVAYFADHPHERALHAAATLEVDTEARISVQNVIHRHYLEVLRPLVRDARLRGDLRADSDTDA
LLSLLLLIFPHLALAPYMRGLDPVLGLDEPTPEQPALAVRRLVAVLAAAFSPAPAHFATPRSEEVT

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25186; Mature: 25055

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTVTWARVDPARRAAIIEAAESEFGAHGFSRGSLNVIARKAGVAKGSLFQYFADKRDLY
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHH
AFIADIGSQRVRGYIEQLIRELDPARPFFEFLTDLLDGWVAYFADHPHERALHAAATLEV
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEEE
DTEARISVQNVIHRHYLEVLRPLVRDARLRGDLRADSDTDALLSLLLLIFPHLALAPYMR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
GLDPVLGLDEPTPEQPALAVRRLVAVLAAAFSPAPAHFATPRSEEVT
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PTVTWARVDPARRAAIIEAAESEFGAHGFSRGSLNVIARKAGVAKGSLFQYFADKRDLY
CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHH
AFIADIGSQRVRGYIEQLIRELDPARPFFEFLTDLLDGWVAYFADHPHERALHAAATLEV
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEEE
DTEARISVQNVIHRHYLEVLRPLVRDARLRGDLRADSDTDALLSLLLLIFPHLALAPYMR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
GLDPVLGLDEPTPEQPALAVRRLVAVLAAAFSPAPAHFATPRSEEVT
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA