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The map label for this gene is bbsG [H]

Identifier: 41409683

GI number: 41409683

Start: 3982675

End: 3983850

Strand: Direct

Name: bbsG [H]

Synonym: MAP3585

Alternate gene names: 41409683

Gene position: 3982675-3983850 (Clockwise)

Preceding gene: 41409682

Following gene: 41409685

Centisome position: 82.46

GC content: 66.75

Gene sequence:

>1176_bases
ATGGACTTCTCCCGGGTAGAACTTTCGGCGCAGGACGCGGCCTTCCAGCAGAGCACGCGCGCGTTCCTGGCCGAGCACGT
CACCGAAGAGGTGCGCCGGCGTGATCGCGAAACCGGCGAAAACTTCAGCGAGCCGGTGCATGTGGCGCTGGGTGAAGCGG
GTTACCTGGAATCGGACTGGAAGCTGGAGTCCGAGGGCGGATTCGATCCGGTACGCCGGCGGATTTTTCAGCTCGAGATC
GGCCGCGCGCACACGCCGTGGTTCCACTGGGGCACCACGGCGGTGGTCGCGCGGTTGGTCAAGCAATTCGGGGCGCCCGA
ACTCGCCGACGCGATCCTGCCCGGCGTGCTGTCCGGGAAGATCCGGCTCTGCCTGGGCTACACCGAACCCGAGGGCGGCT
CCGACGTCGCCACCTGCAAAACCCGGGCCGTGCGGGACGGGTCGGGCTGGATCATCAACGGCTCCAAGATGTTCACCTCG
AACGCGCAGAACGCCGAGTACGTCTTCCTGCTCACCAACACCGATCCGCAGCGGCCGAAACACAAGAACCTGACCATGTT
CCTGGTGCCGCTCGACTCACCGGGCATCGAGATCCAGGGCATCCGCACCGTCGACGGCGACCGCACCAACATCGTCTACT
ACAGTGACGTACGCGTCGACGACCTCTACCGCATCGGCGAGGTCAACGGCGGCTGGACGGTGATGCGGTTCGCCCTCGAC
GCCGAACACGGCCTCACCGACCCCCAAGACCATGGCCTGCAGAACATTTCGATGCTTTCCGAGCACGGCCACCTGATGGC
CGAGGCGGCCGACAGGGTCGCGGCCATCCTGGCCAGACCCGATGCGGCCGGCCGCCGGCCGATCGACGACGAGTCGGTCA
AATACCGGCTCGGGCGCGGCATGGCCCGCATCGAGGCGGCCATGTCGACCCCCGGCATGTACGGACGCGTGGCGCTCATT
CAAACCATGCGTGAGGTATCCCAGGAACTGATGGACCTGCTGGGGACCGCATCGGCCTTGCCCACCGACACCCCGGGTTC
ACCCGACGACGGCGCCATCGAGTTCATCTTCCGGCACGCCGTGCCCGCCGGCATCTACGGCGGCACCATGGAGGTGTTCC
GCAACATGATCGCCCAGCACGAGCTGGGGCTCGGACGGCCTAGCTACGGGCGCTGA

Upstream 100 bases:

>100_bases
CCTGGGTGAGCGTGCACCTGCCCGGCGACAGCATGGCCCACGCGCTGGAGACCCTGGACCGGTTCCGCACCCTGGTCGTC
GACGCCGCCTAGCCGCAACC

Downstream 100 bases:

>100_bases
CCGGCAGCTCGGCCAGCAGCTCGACGCGGGTCTCGTCGAAACTCAGAAAACCCTTGATGGGCAGGCTTTCCGGCGGCGGA
TCCGGATAGCACCAGCCGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 391; Mature: 391

Protein sequence:

>391_residues
MDFSRVELSAQDAAFQQSTRAFLAEHVTEEVRRRDRETGENFSEPVHVALGEAGYLESDWKLESEGGFDPVRRRIFQLEI
GRAHTPWFHWGTTAVVARLVKQFGAPELADAILPGVLSGKIRLCLGYTEPEGGSDVATCKTRAVRDGSGWIINGSKMFTS
NAQNAEYVFLLTNTDPQRPKHKNLTMFLVPLDSPGIEIQGIRTVDGDRTNIVYYSDVRVDDLYRIGEVNGGWTVMRFALD
AEHGLTDPQDHGLQNISMLSEHGHLMAEAADRVAAILARPDAAGRRPIDDESVKYRLGRGMARIEAAMSTPGMYGRVALI
QTMREVSQELMDLLGTASALPTDTPGSPDDGAIEFIFRHAVPAGIYGGTMEVFRNMIAQHELGLGRPSYGR

Sequences:

>Translated_391_residues
MDFSRVELSAQDAAFQQSTRAFLAEHVTEEVRRRDRETGENFSEPVHVALGEAGYLESDWKLESEGGFDPVRRRIFQLEI
GRAHTPWFHWGTTAVVARLVKQFGAPELADAILPGVLSGKIRLCLGYTEPEGGSDVATCKTRAVRDGSGWIINGSKMFTS
NAQNAEYVFLLTNTDPQRPKHKNLTMFLVPLDSPGIEIQGIRTVDGDRTNIVYYSDVRVDDLYRIGEVNGGWTVMRFALD
AEHGLTDPQDHGLQNISMLSEHGHLMAEAADRVAAILARPDAAGRRPIDDESVKYRLGRGMARIEAAMSTPGMYGRVALI
QTMREVSQELMDLLGTASALPTDTPGSPDDGAIEFIFRHAVPAGIYGGTMEVFRNMIAQHELGLGRPSYGR
>Mature_391_residues
MDFSRVELSAQDAAFQQSTRAFLAEHVTEEVRRRDRETGENFSEPVHVALGEAGYLESDWKLESEGGFDPVRRRIFQLEI
GRAHTPWFHWGTTAVVARLVKQFGAPELADAILPGVLSGKIRLCLGYTEPEGGSDVATCKTRAVRDGSGWIINGSKMFTS
NAQNAEYVFLLTNTDPQRPKHKNLTMFLVPLDSPGIEIQGIRTVDGDRTNIVYYSDVRVDDLYRIGEVNGGWTVMRFALD
AEHGLTDPQDHGLQNISMLSEHGHLMAEAADRVAAILARPDAAGRRPIDDESVKYRLGRGMARIEAAMSTPGMYGRVALI
QTMREVSQELMDLLGTASALPTDTPGSPDDGAIEFIFRHAVPAGIYGGTMEVFRNMIAQHELGLGRPSYGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4557231, Length=279, Percent_Identity=26.8817204301075, Blast_Score=73, Evalue=6e-13,
Organism=Homo sapiens, GI187960098, Length=280, Percent_Identity=27.5, Blast_Score=72, Evalue=6e-13,
Organism=Homo sapiens, GI4501859, Length=300, Percent_Identity=24.6666666666667, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI4501857, Length=156, Percent_Identity=30.1282051282051, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI226958412, Length=246, Percent_Identity=25.609756097561, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI4557233, Length=247, Percent_Identity=26.7206477732794, Blast_Score=70, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17551932, Length=139, Percent_Identity=35.9712230215827, Blast_Score=86, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI17505929, Length=137, Percent_Identity=37.2262773722628, Blast_Score=84, Evalue=9e-17,
Organism=Caenorhabditis elegans, GI17538396, Length=252, Percent_Identity=25.7936507936508, Blast_Score=76, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI17508101, Length=301, Percent_Identity=25.5813953488372, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17534899, Length=127, Percent_Identity=38.5826771653543, Blast_Score=72, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI17570075, Length=260, Percent_Identity=29.2307692307692, Blast_Score=69, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17506239, Length=298, Percent_Identity=25.1677852348993, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24660351, Length=97, Percent_Identity=43.298969072165, Blast_Score=72, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: =1.3.99.21 [H]

Molecular weight: Translated: 43119; Mature: 43119

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFSRVELSAQDAAFQQSTRAFLAEHVTEEVRRRDRETGENFSEPVHVALGEAGYLESDW
CCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCC
KLESEGGFDPVRRRIFQLEIGRAHTPWFHWGTTAVVARLVKQFGAPELADAILPGVLSGK
EECCCCCCCHHHHHHHHEECCCCCCCCEECCHHHHHHHHHHHHCCCHHHHHHHHHHHCCC
IRLCLGYTEPEGGSDVATCKTRAVRDGSGWIINGSKMFTSNAQNAEYVFLLTNTDPQRPK
EEEEEEECCCCCCCCHHHHHHHEEECCCCEEEECCEEEECCCCCCEEEEEEECCCCCCCC
HKNLTMFLVPLDSPGIEIQGIRTVDGDRTNIVYYSDVRVDDLYRIGEVNGGWTVMRFALD
CCCEEEEEEECCCCCEEEEEEEECCCCCCEEEEEECCCHHHHHHCCCCCCCEEEEEEEEE
AEHGLTDPQDHGLQNISMLSEHGHLMAEAADRVAAILARPDAAGRRPIDDESVKYRLGRG
CCCCCCCCHHCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCC
MARIEAAMSTPGMYGRVALIQTMREVSQELMDLLGTASALPTDTPGSPDDGAIEFIFRHA
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHC
VPAGIYGGTMEVFRNMIAQHELGLGRPSYGR
CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MDFSRVELSAQDAAFQQSTRAFLAEHVTEEVRRRDRETGENFSEPVHVALGEAGYLESDW
CCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCC
KLESEGGFDPVRRRIFQLEIGRAHTPWFHWGTTAVVARLVKQFGAPELADAILPGVLSGK
EECCCCCCCHHHHHHHHEECCCCCCCCEECCHHHHHHHHHHHHCCCHHHHHHHHHHHCCC
IRLCLGYTEPEGGSDVATCKTRAVRDGSGWIINGSKMFTSNAQNAEYVFLLTNTDPQRPK
EEEEEEECCCCCCCCHHHHHHHEEECCCCEEEECCEEEECCCCCCEEEEEEECCCCCCCC
HKNLTMFLVPLDSPGIEIQGIRTVDGDRTNIVYYSDVRVDDLYRIGEVNGGWTVMRFALD
CCCEEEEEEECCCCCEEEEEEEECCCCCCEEEEEECCCHHHHHHCCCCCCCEEEEEEEEE
AEHGLTDPQDHGLQNISMLSEHGHLMAEAADRVAAILARPDAAGRRPIDDESVKYRLGRG
CCCCCCCCHHCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCC
MARIEAAMSTPGMYGRVALIQTMREVSQELMDLLGTASALPTDTPGSPDDGAIEFIFRHA
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHC
VPAGIYGGTMEVFRNMIAQHELGLGRPSYGR
CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10629170; 12420174 [H]