| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409669
Identifier: 41409669
GI number: 41409669
Start: 3970222
End: 3970635
Strand: Direct
Name: 41409669
Synonym: MAP3571
Alternate gene names: NA
Gene position: 3970222-3970635 (Clockwise)
Preceding gene: 41409665
Following gene: 41409670
Centisome position: 82.2
GC content: 67.15
Gene sequence:
>414_bases CTGCAGAAGGTGCAAGCCGCCGAGGACGCCTGGAACACCCGCGATCCCGACCACGTCAGCCTCGCGTACACGCCCGATTC ACGGTGGCGCAACCGCGACGAGTACATCGTGGGCCGCGATCAGATCGTCGCCTTTTTGACCCGCAAGTGGCAGCGCGAAC TCGGCTACTCGCTGCGCAAGAGCCTGTGGGACTTCCACGACAACCGCATCGCGGTGCGGTTCCAGTACGAGTGCCGCGAC CGGTCCGGCCAGTGGTACCGCAGCTACGGCAACGAGCTGTGGGAGTTCACCGAATCGGGGCTGATGGCCCGCCGCGAGGC CAGCATCAACGACGTGCCGATCGACGAGTCGCAGCGCCGCTACTTCGGGCCGCGCCCGGCGTCCGAACACGGCCGGGAGA TTCCGCTCTGGTAG
Upstream 100 bases:
>100_bases GACACGCCGCTGGGAATGGGCTTTTGTGTCTGCTCGCGGTAGAGATGCGGCATGACCGAATCCCGACCCCCCCTTCCCGC CGTTCACCCGGGACACGGCC
Downstream 100 bases:
>100_bases CGCCGGCGCGGCGGCGACGGCGCGGGCCGGGTGCGGCCTGCGGCGCGGCGCGGCGACCGGGTTAGGGTGTTCACGCCAAC GGGGTCGCCGATGAGTTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 137; Mature: 137
Protein sequence:
>137_residues MQKVQAAEDAWNTRDPDHVSLAYTPDSRWRNRDEYIVGRDQIVAFLTRKWQRELGYSLRKSLWDFHDNRIAVRFQYECRD RSGQWYRSYGNELWEFTESGLMARREASINDVPIDESQRRYFGPRPASEHGREIPLW
Sequences:
>Translated_137_residues MQKVQAAEDAWNTRDPDHVSLAYTPDSRWRNRDEYIVGRDQIVAFLTRKWQRELGYSLRKSLWDFHDNRIAVRFQYECRD RSGQWYRSYGNELWEFTESGLMARREASINDVPIDESQRRYFGPRPASEHGREIPLW >Mature_137_residues MQKVQAAEDAWNTRDPDHVSLAYTPDSRWRNRDEYIVGRDQIVAFLTRKWQRELGYSLRKSLWDFHDNRIAVRFQYECRD RSGQWYRSYGNELWEFTESGLMARREASINDVPIDESQRRYFGPRPASEHGREIPLW
Specific function: Unknown
COG id: COG3558
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16558; Mature: 16558
Theoretical pI: Translated: 7.60; Mature: 7.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKVQAAEDAWNTRDPDHVSLAYTPDSRWRNRDEYIVGRDQIVAFLTRKWQRELGYSLRK CCCCCCCHHCCCCCCCCCEEEEECCCHHCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHH SLWDFHDNRIAVRFQYECRDRSGQWYRSYGNELWEFTESGLMARREASINDVPIDESQRR HHHHCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH YFGPRPASEHGREIPLW HCCCCCCCCCCCCCCCC >Mature Secondary Structure MQKVQAAEDAWNTRDPDHVSLAYTPDSRWRNRDEYIVGRDQIVAFLTRKWQRELGYSLRK CCCCCCCHHCCCCCCCCCEEEEECCCHHCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHH SLWDFHDNRIAVRFQYECRDRSGQWYRSYGNELWEFTESGLMARREASINDVPIDESQRR HHHHCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH YFGPRPASEHGREIPLW HCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA