| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409656
Identifier: 41409656
GI number: 41409656
Start: 3958145
End: 3958543
Strand: Reverse
Name: 41409656
Synonym: MAP3558c
Alternate gene names: NA
Gene position: 3958543-3958145 (Counterclockwise)
Preceding gene: 41409666
Following gene: 41409652
Centisome position: 81.96
GC content: 65.16
Gene sequence:
>399_bases ATGACGCCGTTCGATGATCCTCAGGGCGAACTGGCCTGGATGTTCTTACAGAGCACCACCGAGGGCGGCGATCTGGACGA GGGCTTCGCGCTGCTCAGCGACGACTTCAGCTACTGGACGCTCTACACCCGCGCGGCTTGCGACAAGGACACCTTGCGGC GGGCGATCGAGCGGCGCAAACAGGACCTGGAGCTGACCATCGACCTGGTGCGCTGTGTCAACGAGGGCGAGACGGTCGTG GTGGAGGCGCAGGCCGCCGGAACCACCTCCGCGGGCGTCGAGTACGACAGCCCGTTCGTGTGCATTTTCGACACCCGCGA CGGGCTGATCGTGTCGATGCGCGTGTACAGCGACACCCGGGCGGTGGATAACGCGATGCCCGGATGGATCGGCTACTGA
Upstream 100 bases:
>100_bases CTCCGGGAAACACCACGGTGCGCGCGCTGCTCTTCACCCGATGCTCTCCGATTTGCCCTGATTGACCGTGAACTGCGTGC CACGTCAATATTGCGGTGTG
Downstream 100 bases:
>100_bases GCTCAGTCGGTCGAGATGCTGATCTCGGCCTTGTCGGGGTAGAACGCGGCGTGCCCGGCGATCGCCGCCACCGCGGGGTA GGGCTGCTCGTAGGTCCAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 132; Mature: 131
Protein sequence:
>132_residues MTPFDDPQGELAWMFLQSTTEGGDLDEGFALLSDDFSYWTLYTRAACDKDTLRRAIERRKQDLELTIDLVRCVNEGETVV VEAQAAGTTSAGVEYDSPFVCIFDTRDGLIVSMRVYSDTRAVDNAMPGWIGY
Sequences:
>Translated_132_residues MTPFDDPQGELAWMFLQSTTEGGDLDEGFALLSDDFSYWTLYTRAACDKDTLRRAIERRKQDLELTIDLVRCVNEGETVV VEAQAAGTTSAGVEYDSPFVCIFDTRDGLIVSMRVYSDTRAVDNAMPGWIGY >Mature_131_residues TPFDDPQGELAWMFLQSTTEGGDLDEGFALLSDDFSYWTLYTRAACDKDTLRRAIERRKQDLELTIDLVRCVNEGETVVV EAQAAGTTSAGVEYDSPFVCIFDTRDGLIVSMRVYSDTRAVDNAMPGWIGY
Specific function: Unknown
COG id: COG3631
COG function: function code R; Ketosteroid isomerase-related protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14767; Mature: 14635
Theoretical pI: Translated: 3.93; Mature: 3.93
Prosite motif: PS00430 TONB_DEPENDENT_REC_1 ; PS00284 SERPIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPFDDPQGELAWMFLQSTTEGGDLDEGFALLSDDFSYWTLYTRAACDKDTLRRAIERRK CCCCCCCCCCEEEEEEEECCCCCCCCCCEEEECCCCCEEEEEECCCCCHHHHHHHHHHHH QDLELTIDLVRCVNEGETVVVEAQAAGTTSAGVEYDSPFVCIFDTRDGLIVSMRVYSDTR HCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCH AVDNAMPGWIGY HHHCCCCCCCCC >Mature Secondary Structure TPFDDPQGELAWMFLQSTTEGGDLDEGFALLSDDFSYWTLYTRAACDKDTLRRAIERRK CCCCCCCCCEEEEEEEECCCCCCCCCCEEEECCCCCEEEEEECCCCCHHHHHHHHHHHH QDLELTIDLVRCVNEGETVVVEAQAAGTTSAGVEYDSPFVCIFDTRDGLIVSMRVYSDTR HCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCH AVDNAMPGWIGY HHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA