| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409645
Identifier: 41409645
GI number: 41409645
Start: 3949041
End: 3950153
Strand: Reverse
Name: 41409645
Synonym: MAP3547c
Alternate gene names: NA
Gene position: 3950153-3949041 (Counterclockwise)
Preceding gene: 41409646
Following gene: 41409642
Centisome position: 81.79
GC content: 69.72
Gene sequence:
>1113_bases ATGACGCACGAATCGACCGCCGCATGGCGGGAATTGCTGGCCGCCCTGGGCGAGCTCGACCGCTCCTTCCTGGAGGGCGA CCGCGCGGTCAGCGACGACCGGCACATCGCCGACGGCTACCGCATGCTCGCCACCACCCTGGGCGTGGCGTTCGACACCT ACCTGTTCCCCGAGCCCGACCGGCCGCAGTTCGTCGCGGTGAACACGCCGTTTCGCCGCGACCGGCGCTGGGGCGGCGAC AACACCGACGCCTACTACTTCATCTGCCCGGTGGATCCGAAGCGCCGGTACCGGATCAGCGGCAACAAGGGTGACAGCGT GTACTTTTCGGTGACCGCCTACAACGAACCGTCACTCGGGGCGTGGTCGGACCGGGTCGTCGCGATCGTCCGCGACAGCG ACCTGGACGTCGACGCCGACGGCAACTTCTCCTTCGAATTTCCCCCGACACCCGATGCGGCGGTGCTGATGACCCGCGAC TACCAGGCCGACCCGCTGACCGGGCGCCCGGTGACGTGGCGAATCGAGGCGCTCGATGAGCCCGCGCCGATCCGGCACGG CGACGCCGAGACCGCCGCCCGGCTGCGCGCGGTCGCGACCTGGCTGCGCACCATGTTCGCCATCGTCCCGCTGGCGGTCG GCAACCGGGTTGATGACCAGCACGCGCTCGGGCACGAAACCGCCCACGCCGCAAACGCATTCGCCGACCCCTATCAGGTG CCCGACGCCAACTTCGGCTGGTCGGCACGCGATGCCTGCTACTCCTACGGCAGTTTCGTGCTCGACGACGACGAGGCCCT GGTCATCACGCACCGGCCCCCGTCCTGCCGGTTCTGGAACATGGTGGTGTGGAACCAGTTCATGGCCACCTACGGCGCCG CGGAGGGCCCCGACGCCCGGTGCTCGATCAACGGCCACAGCGCCGTCGCCAACAGCGACGGCACGGTGACGATCGTGTTG TCCCGCGACCGCACGCCGCACCCGAATTCCGTTACCACGCTGGGCTATCCGCGTGGCAACCTGGCCTTCCGGTGGTTCCT GGCCGATGGGGTGCCCGCCCGGCCCGAGGTGGAACTCGTCAAGGCCGCCGACGCCCCGACGGCGGTGCGCTGA
Upstream 100 bases:
>100_bases TCGCGGGTGTCACCTTGGTGGCCCTGCTGACCCGCCCCACCGAGCTCGACGACGCGTGGGTCGATCGCACCACCAGGTTG CTCCTGAAAGGAATCAGCGC
Downstream 100 bases:
>100_bases GCCATCCCGTTGCGCCGAGCGTGGGGGCTGTGTAGGCGAGGCGTCCGCAATCCGTACATGGCCCCCACGCTCGGGAGTCG CTCAGGCGGCCACCGGCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 370; Mature: 369
Protein sequence:
>370_residues MTHESTAAWRELLAALGELDRSFLEGDRAVSDDRHIADGYRMLATTLGVAFDTYLFPEPDRPQFVAVNTPFRRDRRWGGD NTDAYYFICPVDPKRRYRISGNKGDSVYFSVTAYNEPSLGAWSDRVVAIVRDSDLDVDADGNFSFEFPPTPDAAVLMTRD YQADPLTGRPVTWRIEALDEPAPIRHGDAETAARLRAVATWLRTMFAIVPLAVGNRVDDQHALGHETAHAANAFADPYQV PDANFGWSARDACYSYGSFVLDDDEALVITHRPPSCRFWNMVVWNQFMATYGAAEGPDARCSINGHSAVANSDGTVTIVL SRDRTPHPNSVTTLGYPRGNLAFRWFLADGVPARPEVELVKAADAPTAVR
Sequences:
>Translated_370_residues MTHESTAAWRELLAALGELDRSFLEGDRAVSDDRHIADGYRMLATTLGVAFDTYLFPEPDRPQFVAVNTPFRRDRRWGGD NTDAYYFICPVDPKRRYRISGNKGDSVYFSVTAYNEPSLGAWSDRVVAIVRDSDLDVDADGNFSFEFPPTPDAAVLMTRD YQADPLTGRPVTWRIEALDEPAPIRHGDAETAARLRAVATWLRTMFAIVPLAVGNRVDDQHALGHETAHAANAFADPYQV PDANFGWSARDACYSYGSFVLDDDEALVITHRPPSCRFWNMVVWNQFMATYGAAEGPDARCSINGHSAVANSDGTVTIVL SRDRTPHPNSVTTLGYPRGNLAFRWFLADGVPARPEVELVKAADAPTAVR >Mature_369_residues THESTAAWRELLAALGELDRSFLEGDRAVSDDRHIADGYRMLATTLGVAFDTYLFPEPDRPQFVAVNTPFRRDRRWGGDN TDAYYFICPVDPKRRYRISGNKGDSVYFSVTAYNEPSLGAWSDRVVAIVRDSDLDVDADGNFSFEFPPTPDAAVLMTRDY QADPLTGRPVTWRIEALDEPAPIRHGDAETAARLRAVATWLRTMFAIVPLAVGNRVDDQHALGHETAHAANAFADPYQVP DANFGWSARDACYSYGSFVLDDDEALVITHRPPSCRFWNMVVWNQFMATYGAAEGPDARCSINGHSAVANSDGTVTIVLS RDRTPHPNSVTTLGYPRGNLAFRWFLADGVPARPEVELVKAADAPTAVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40978; Mature: 40847
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHESTAAWRELLAALGELDRSFLEGDRAVSDDRHIADGYRMLATTLGVAFDTYLFPEPD CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCC RPQFVAVNTPFRRDRRWGGDNTDAYYFICPVDPKRRYRISGNKGDSVYFSVTAYNEPSLG CCCEEEECCCHHHHCCCCCCCCCEEEEEEECCCCCEEEECCCCCCEEEEEEEECCCCCCC AWSDRVVAIVRDSDLDVDADGNFSFEFPPTPDAAVLMTRDYQADPLTGRPVTWRIEALDE CCCCEEEEEEECCCCCCCCCCCEEEECCCCCCCEEEEECCCCCCCCCCCCEEEEEEECCC PAPIRHGDAETAARLRAVATWLRTMFAIVPLAVGNRVDDQHALGHETAHAANAFADPYQV CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHCCCCCCC PDANFGWSARDACYSYGSFVLDDDEALVITHRPPSCRFWNMVVWNQFMATYGAAEGPDAR CCCCCCCCHHHHHHHCCCEEECCCCEEEEEECCCCCEEEHHHHHHHHHHHHCCCCCCCCE CSINGHSAVANSDGTVTIVLSRDRTPHPNSVTTLGYPRGNLAFRWFLADGVPARPEVELV EEECCCCEEECCCCEEEEEEECCCCCCCCCEEEECCCCCCEEEEEEEECCCCCCCCEEEE KAADAPTAVR EECCCCCCCC >Mature Secondary Structure THESTAAWRELLAALGELDRSFLEGDRAVSDDRHIADGYRMLATTLGVAFDTYLFPEPD CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCC RPQFVAVNTPFRRDRRWGGDNTDAYYFICPVDPKRRYRISGNKGDSVYFSVTAYNEPSLG CCCEEEECCCHHHHCCCCCCCCCEEEEEEECCCCCEEEECCCCCCEEEEEEEECCCCCCC AWSDRVVAIVRDSDLDVDADGNFSFEFPPTPDAAVLMTRDYQADPLTGRPVTWRIEALDE CCCCEEEEEEECCCCCCCCCCCEEEECCCCCCCEEEEECCCCCCCCCCCCEEEEEEECCC PAPIRHGDAETAARLRAVATWLRTMFAIVPLAVGNRVDDQHALGHETAHAANAFADPYQV CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHCCCCCCC PDANFGWSARDACYSYGSFVLDDDEALVITHRPPSCRFWNMVVWNQFMATYGAAEGPDAR CCCCCCCCHHHHHHHCCCEEECCCCEEEEEECCCCCEEEHHHHHHHHHHHHCCCCCCCCE CSINGHSAVANSDGTVTIVLSRDRTPHPNSVTTLGYPRGNLAFRWFLADGVPARPEVELV EEECCCCEEECCCCEEEEEEECCCCCCCCCEEEECCCCCCEEEEEEEECCCCCCCCEEEE KAADAPTAVR EECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA