Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41409645

Identifier: 41409645

GI number: 41409645

Start: 3949041

End: 3950153

Strand: Reverse

Name: 41409645

Synonym: MAP3547c

Alternate gene names: NA

Gene position: 3950153-3949041 (Counterclockwise)

Preceding gene: 41409646

Following gene: 41409642

Centisome position: 81.79

GC content: 69.72

Gene sequence:

>1113_bases
ATGACGCACGAATCGACCGCCGCATGGCGGGAATTGCTGGCCGCCCTGGGCGAGCTCGACCGCTCCTTCCTGGAGGGCGA
CCGCGCGGTCAGCGACGACCGGCACATCGCCGACGGCTACCGCATGCTCGCCACCACCCTGGGCGTGGCGTTCGACACCT
ACCTGTTCCCCGAGCCCGACCGGCCGCAGTTCGTCGCGGTGAACACGCCGTTTCGCCGCGACCGGCGCTGGGGCGGCGAC
AACACCGACGCCTACTACTTCATCTGCCCGGTGGATCCGAAGCGCCGGTACCGGATCAGCGGCAACAAGGGTGACAGCGT
GTACTTTTCGGTGACCGCCTACAACGAACCGTCACTCGGGGCGTGGTCGGACCGGGTCGTCGCGATCGTCCGCGACAGCG
ACCTGGACGTCGACGCCGACGGCAACTTCTCCTTCGAATTTCCCCCGACACCCGATGCGGCGGTGCTGATGACCCGCGAC
TACCAGGCCGACCCGCTGACCGGGCGCCCGGTGACGTGGCGAATCGAGGCGCTCGATGAGCCCGCGCCGATCCGGCACGG
CGACGCCGAGACCGCCGCCCGGCTGCGCGCGGTCGCGACCTGGCTGCGCACCATGTTCGCCATCGTCCCGCTGGCGGTCG
GCAACCGGGTTGATGACCAGCACGCGCTCGGGCACGAAACCGCCCACGCCGCAAACGCATTCGCCGACCCCTATCAGGTG
CCCGACGCCAACTTCGGCTGGTCGGCACGCGATGCCTGCTACTCCTACGGCAGTTTCGTGCTCGACGACGACGAGGCCCT
GGTCATCACGCACCGGCCCCCGTCCTGCCGGTTCTGGAACATGGTGGTGTGGAACCAGTTCATGGCCACCTACGGCGCCG
CGGAGGGCCCCGACGCCCGGTGCTCGATCAACGGCCACAGCGCCGTCGCCAACAGCGACGGCACGGTGACGATCGTGTTG
TCCCGCGACCGCACGCCGCACCCGAATTCCGTTACCACGCTGGGCTATCCGCGTGGCAACCTGGCCTTCCGGTGGTTCCT
GGCCGATGGGGTGCCCGCCCGGCCCGAGGTGGAACTCGTCAAGGCCGCCGACGCCCCGACGGCGGTGCGCTGA

Upstream 100 bases:

>100_bases
TCGCGGGTGTCACCTTGGTGGCCCTGCTGACCCGCCCCACCGAGCTCGACGACGCGTGGGTCGATCGCACCACCAGGTTG
CTCCTGAAAGGAATCAGCGC

Downstream 100 bases:

>100_bases
GCCATCCCGTTGCGCCGAGCGTGGGGGCTGTGTAGGCGAGGCGTCCGCAATCCGTACATGGCCCCCACGCTCGGGAGTCG
CTCAGGCGGCCACCGGCTCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 370; Mature: 369

Protein sequence:

>370_residues
MTHESTAAWRELLAALGELDRSFLEGDRAVSDDRHIADGYRMLATTLGVAFDTYLFPEPDRPQFVAVNTPFRRDRRWGGD
NTDAYYFICPVDPKRRYRISGNKGDSVYFSVTAYNEPSLGAWSDRVVAIVRDSDLDVDADGNFSFEFPPTPDAAVLMTRD
YQADPLTGRPVTWRIEALDEPAPIRHGDAETAARLRAVATWLRTMFAIVPLAVGNRVDDQHALGHETAHAANAFADPYQV
PDANFGWSARDACYSYGSFVLDDDEALVITHRPPSCRFWNMVVWNQFMATYGAAEGPDARCSINGHSAVANSDGTVTIVL
SRDRTPHPNSVTTLGYPRGNLAFRWFLADGVPARPEVELVKAADAPTAVR

Sequences:

>Translated_370_residues
MTHESTAAWRELLAALGELDRSFLEGDRAVSDDRHIADGYRMLATTLGVAFDTYLFPEPDRPQFVAVNTPFRRDRRWGGD
NTDAYYFICPVDPKRRYRISGNKGDSVYFSVTAYNEPSLGAWSDRVVAIVRDSDLDVDADGNFSFEFPPTPDAAVLMTRD
YQADPLTGRPVTWRIEALDEPAPIRHGDAETAARLRAVATWLRTMFAIVPLAVGNRVDDQHALGHETAHAANAFADPYQV
PDANFGWSARDACYSYGSFVLDDDEALVITHRPPSCRFWNMVVWNQFMATYGAAEGPDARCSINGHSAVANSDGTVTIVL
SRDRTPHPNSVTTLGYPRGNLAFRWFLADGVPARPEVELVKAADAPTAVR
>Mature_369_residues
THESTAAWRELLAALGELDRSFLEGDRAVSDDRHIADGYRMLATTLGVAFDTYLFPEPDRPQFVAVNTPFRRDRRWGGDN
TDAYYFICPVDPKRRYRISGNKGDSVYFSVTAYNEPSLGAWSDRVVAIVRDSDLDVDADGNFSFEFPPTPDAAVLMTRDY
QADPLTGRPVTWRIEALDEPAPIRHGDAETAARLRAVATWLRTMFAIVPLAVGNRVDDQHALGHETAHAANAFADPYQVP
DANFGWSARDACYSYGSFVLDDDEALVITHRPPSCRFWNMVVWNQFMATYGAAEGPDARCSINGHSAVANSDGTVTIVLS
RDRTPHPNSVTTLGYPRGNLAFRWFLADGVPARPEVELVKAADAPTAVR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40978; Mature: 40847

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHESTAAWRELLAALGELDRSFLEGDRAVSDDRHIADGYRMLATTLGVAFDTYLFPEPD
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCC
RPQFVAVNTPFRRDRRWGGDNTDAYYFICPVDPKRRYRISGNKGDSVYFSVTAYNEPSLG
CCCEEEECCCHHHHCCCCCCCCCEEEEEEECCCCCEEEECCCCCCEEEEEEEECCCCCCC
AWSDRVVAIVRDSDLDVDADGNFSFEFPPTPDAAVLMTRDYQADPLTGRPVTWRIEALDE
CCCCEEEEEEECCCCCCCCCCCEEEECCCCCCCEEEEECCCCCCCCCCCCEEEEEEECCC
PAPIRHGDAETAARLRAVATWLRTMFAIVPLAVGNRVDDQHALGHETAHAANAFADPYQV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHCCCCCCC
PDANFGWSARDACYSYGSFVLDDDEALVITHRPPSCRFWNMVVWNQFMATYGAAEGPDAR
CCCCCCCCHHHHHHHCCCEEECCCCEEEEEECCCCCEEEHHHHHHHHHHHHCCCCCCCCE
CSINGHSAVANSDGTVTIVLSRDRTPHPNSVTTLGYPRGNLAFRWFLADGVPARPEVELV
EEECCCCEEECCCCEEEEEEECCCCCCCCCEEEECCCCCCEEEEEEEECCCCCCCCEEEE
KAADAPTAVR
EECCCCCCCC
>Mature Secondary Structure 
THESTAAWRELLAALGELDRSFLEGDRAVSDDRHIADGYRMLATTLGVAFDTYLFPEPD
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCC
RPQFVAVNTPFRRDRRWGGDNTDAYYFICPVDPKRRYRISGNKGDSVYFSVTAYNEPSLG
CCCEEEECCCHHHHCCCCCCCCCEEEEEEECCCCCEEEECCCCCCEEEEEEEECCCCCCC
AWSDRVVAIVRDSDLDVDADGNFSFEFPPTPDAAVLMTRDYQADPLTGRPVTWRIEALDE
CCCCEEEEEEECCCCCCCCCCCEEEECCCCCCCEEEEECCCCCCCCCCCCEEEEEEECCC
PAPIRHGDAETAARLRAVATWLRTMFAIVPLAVGNRVDDQHALGHETAHAANAFADPYQV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHCCCCCCC
PDANFGWSARDACYSYGSFVLDDDEALVITHRPPSCRFWNMVVWNQFMATYGAAEGPDAR
CCCCCCCCHHHHHHHCCCEEECCCCEEEEEECCCCCEEEHHHHHHHHHHHHCCCCCCCCE
CSINGHSAVANSDGTVTIVLSRDRTPHPNSVTTLGYPRGNLAFRWFLADGVPARPEVELV
EEECCCCEEECCCCEEEEEEECCCCCCCCCEEEECCCCCCEEEEEEEECCCCCCCCEEEE
KAADAPTAVR
EECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA