| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is bpoC_1
Identifier: 41409635
GI number: 41409635
Start: 3940145
End: 3940981
Strand: Reverse
Name: bpoC_1
Synonym: MAP3537c
Alternate gene names: 41409635
Gene position: 3940981-3940145 (Counterclockwise)
Preceding gene: 41409637
Following gene: 41409632
Centisome position: 81.6
GC content: 69.65
Gene sequence:
>837_bases ATGCCCGATGTGATCGCCCACCATGGACTTCTCAAGGACACCCGGCTGCATGTCGACGACACCGGCGGGCCCGGCAGACC GGTGCTGCTCATGCACCCGTGGCCGCTGTCCGGCCAGTCGTGGTCGGCACAGGTCCCGGTGCTGCACGCCGCCGGCTATC GGGTGGTCACCTACGACCGGCGCGGTTTCGGGCGCAGCGACAAGCCGCTCACCGGGTACAGCTACTCCCAGCTCACGCAG GACCTGCACACCCTGGTCGAATCCCTCGACCTGCGCGACCTCACCCTGGTGGGCTCCTCGATGGGCGGCGGCGAGGTCGC CCGCTACCTGTCGACCTACGGCCCCGAGCGGGTGCGCAGCGTGGTGTTCGCCTCCTCGGTGACGCCGTACCTGTTGCAGA CCACCGACAATCCGGACGGGCCGCTGACCATGAAGGACGCGGCGCGGGCGACGGCGTCGTTCGTCAAGGACCAGGACGCC TTCTACGACCATCAGATGACCGAGTTCTTCTCCGCCAACGGACAATTGCGGGTGAGCCGGGCGACCCGCGCCGAGGCGCT CAGGCTATGCAAGCAGGCCGGCAAGGAGGCGTCGCTGGCCTGCATGGCCGCCTGGGCCAACACCGACTTCCGTCCCGACC TGACCCGGGTGTCGGTGCCGGCGCTGATCATCCACGGCGAGGGCGACGAATCCGTGCCGCTCGCCGGGTCGGCGCGGCGC ACCCACCGGGCGATACCGGGCAGCCGGCTGTGCGTGATCGCCGACGGGCCGCACGGTTGCCACATCAGCCACGCGCAAGA GTTCAACGCGGCACTGCTGGACTTTCTGGCGGCCTAG
Upstream 100 bases:
>100_bases TTTCGGCTGCCAACAATAGCGCCCGGCCACGGTTAGCCCCGGACGGTCACGGGTAGTAGCCGGTGAGCCAGCGAACTCCA CCGCCGCGGAAGGTCGTTTC
Downstream 100 bases:
>100_bases GTGCCTGGGTGCGCGGCGCCGTTTCGGACGAGCCGTCGCGGGAATCCCACCCGCAACGCTGACCGCAGGAAAGGAAGGCG CATGCCAGACCACAAGGGCC
Product: BpoC_1
Products: 2-oxopent-4-enoate; succinate [C]
Alternate protein names: BPO2; Bromide peroxidase [H]
Number of amino acids: Translated: 278; Mature: 277
Protein sequence:
>278_residues MPDVIAHHGLLKDTRLHVDDTGGPGRPVLLMHPWPLSGQSWSAQVPVLHAAGYRVVTYDRRGFGRSDKPLTGYSYSQLTQ DLHTLVESLDLRDLTLVGSSMGGGEVARYLSTYGPERVRSVVFASSVTPYLLQTTDNPDGPLTMKDAARATASFVKDQDA FYDHQMTEFFSANGQLRVSRATRAEALRLCKQAGKEASLACMAAWANTDFRPDLTRVSVPALIIHGEGDESVPLAGSARR THRAIPGSRLCVIADGPHGCHISHAQEFNAALLDFLAA
Sequences:
>Translated_278_residues MPDVIAHHGLLKDTRLHVDDTGGPGRPVLLMHPWPLSGQSWSAQVPVLHAAGYRVVTYDRRGFGRSDKPLTGYSYSQLTQ DLHTLVESLDLRDLTLVGSSMGGGEVARYLSTYGPERVRSVVFASSVTPYLLQTTDNPDGPLTMKDAARATASFVKDQDA FYDHQMTEFFSANGQLRVSRATRAEALRLCKQAGKEASLACMAAWANTDFRPDLTRVSVPALIIHGEGDESVPLAGSARR THRAIPGSRLCVIADGPHGCHISHAQEFNAALLDFLAA >Mature_277_residues PDVIAHHGLLKDTRLHVDDTGGPGRPVLLMHPWPLSGQSWSAQVPVLHAAGYRVVTYDRRGFGRSDKPLTGYSYSQLTQD LHTLVESLDLRDLTLVGSSMGGGEVARYLSTYGPERVRSVVFASSVTPYLLQTTDNPDGPLTMKDAARATASFVKDQDAF YDHQMTEFFSANGQLRVSRATRAEALRLCKQAGKEASLACMAAWANTDFRPDLTRVSVPALIIHGEGDESVPLAGSARRT HRAIPGSRLCVIADGPHGCHISHAQEFNAALLDFLAA
Specific function: May be a chlorinating enzyme involved in 7- chlorotetracycline biosynthesis [H]
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial non-heme bromo- and chloro- peroxidases family [H]
Homologues:
Organism=Homo sapiens, GI27597073, Length=300, Percent_Identity=26.6666666666667, Blast_Score=78, Evalue=8e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR000639 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: 3.7.1.- [C]
Molecular weight: Translated: 30164; Mature: 30033
Theoretical pI: Translated: 7.15; Mature: 7.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDVIAHHGLLKDTRLHVDDTGGPGRPVLLMHPWPLSGQSWSAQVPVLHAAGYRVVTYDR CCCCHHHCCCCCCCEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCEEEECCEEEEEECC RGFGRSDKPLTGYSYSQLTQDLHTLVESLDLRDLTLVGSSMGGGEVARYLSTYGPERVRS CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCHHHHHH VVFASSVTPYLLQTTDNPDGPLTMKDAARATASFVKDQDAFYDHQMTEFFSANGQLRVSR HHHHCCCCCEEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEH ATRAEALRLCKQAGKEASLACMAAWANTDFRPDLTRVSVPALIIHGEGDESVPLAGSARR HHHHHHHHHHHHCCCCHHEEEEEEECCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCHH THRAIPGSRLCVIADGPHGCHISHAQEFNAALLDFLAA HHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure PDVIAHHGLLKDTRLHVDDTGGPGRPVLLMHPWPLSGQSWSAQVPVLHAAGYRVVTYDR CCCHHHCCCCCCCEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCEEEECCEEEEEECC RGFGRSDKPLTGYSYSQLTQDLHTLVESLDLRDLTLVGSSMGGGEVARYLSTYGPERVRS CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCHHHHHH VVFASSVTPYLLQTTDNPDGPLTMKDAARATASFVKDQDAFYDHQMTEFFSANGQLRVSR HHHHCCCCCEEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEH ATRAEALRLCKQAGKEASLACMAAWANTDFRPDLTRVSVPALIIHGEGDESVPLAGSARR HHHHHHHHHHHHCCCCHHEEEEEEECCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCHH THRAIPGSRLCVIADGPHGCHISHAQEFNAALLDFLAA HHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 2-hydroxy-6-ketononadienedicarboxylate; H2O [C]
Specific reaction: 2-hydroxy-6-ketononadienedicarboxylate + H2O = 2-oxopent-4-enoate + succinate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1527491; 1783900; 7664081; 9642069 [H]