| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409632
Identifier: 41409632
GI number: 41409632
Start: 3938562
End: 3939116
Strand: Reverse
Name: 41409632
Synonym: MAP3534c
Alternate gene names: NA
Gene position: 3939116-3938562 (Counterclockwise)
Preceding gene: 41409635
Following gene: 41409631
Centisome position: 81.56
GC content: 73.87
Gene sequence:
>555_bases ATGGTATATGCCGCGGCGCTGGTTCGGGTGACCGCGCCCGGCACGCACAATGGCCGGGTGAGGCTGCTGCTGATCGCCGA CACCCACATCCCCGGGCGGGCCCGCGATCTGCCCGCGCAGGTGTGGGACGAGGTGGCCGGGGCCGACGTCGTGATCCACG CCGGCGACTGGACGGCACCGGAGTTCTTCGACGAGCTCGACGGCCGGGCCGCCCGGCTGGTGGCCTGCTGGGGCAACAAC GACGGCCCGGCGCTTCGGGCTCGGCTGCCCGAGCGGGCCGACGTCACCCTGGCGGGCGTGCGGTTCACCGTCGTGCACGA GACCGGCGCCGCCGCGGGCCGGGAGGCGCGGATGTCGCGGCGGTATCCGGACAGCCAGGTGCTGGTGTTCGGGCACAGCC ACATCCCCTGGGACACCACCACCCGAACCGGGCTGCGGCTGCTCAATCCGGGCTCGCCGACGGATCGCCGCCGCCAGCCG TTCTGCACCTACCTGACCGCGTGCGCCGCCGACGGCGCCGTGAGCGACGTGGTGCTGCACCGCCTCACCAAGTGA
Upstream 100 bases:
>100_bases GGTCAGGACGACGTCGATGTCGCCGGGGTCGTGCCGGGCGGCGTCGGCTTTGCGGGTGCGGCCGCTGTCGATTGCCATAT CCATTTATACCCTACCCCGT
Downstream 100 bases:
>100_bases CCGTGCCCCTGGTGGCGGCTCCGTTCGGCCCTATAAATAGCTCGGTTACAGAGGTATTATGGGCGGGGTGAAAGCACGCA CGGACGTAACCTCCGAGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 184; Mature: 184
Protein sequence:
>184_residues MVYAAALVRVTAPGTHNGRVRLLLIADTHIPGRARDLPAQVWDEVAGADVVIHAGDWTAPEFFDELDGRAARLVACWGNN DGPALRARLPERADVTLAGVRFTVVHETGAAAGREARMSRRYPDSQVLVFGHSHIPWDTTTRTGLRLLNPGSPTDRRRQP FCTYLTACAADGAVSDVVLHRLTK
Sequences:
>Translated_184_residues MVYAAALVRVTAPGTHNGRVRLLLIADTHIPGRARDLPAQVWDEVAGADVVIHAGDWTAPEFFDELDGRAARLVACWGNN DGPALRARLPERADVTLAGVRFTVVHETGAAAGREARMSRRYPDSQVLVFGHSHIPWDTTTRTGLRLLNPGSPTDRRRQP FCTYLTACAADGAVSDVVLHRLTK >Mature_184_residues MVYAAALVRVTAPGTHNGRVRLLLIADTHIPGRARDLPAQVWDEVAGADVVIHAGDWTAPEFFDELDGRAARLVACWGNN DGPALRARLPERADVTLAGVRFTVVHETGAAAGREARMSRRYPDSQVLVFGHSHIPWDTTTRTGLRLLNPGSPTDRRRQP FCTYLTACAADGAVSDVVLHRLTK
Specific function: Unknown
COG id: COG0622
COG function: function code R; Predicted phosphoesterase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metallophosphoesterase superfamily. YfcE family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004843 - InterPro: IPR020935 - InterPro: IPR000979 [H]
Pfam domain/function: PF00149 Metallophos [H]
EC number: NA
Molecular weight: Translated: 20040; Mature: 20040
Theoretical pI: Translated: 8.52; Mature: 8.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVYAAALVRVTAPGTHNGRVRLLLIADTHIPGRARDLPAQVWDEVAGADVVIHAGDWTAP CEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHCCCEEEEECCCCCCH EFFDELDGRAARLVACWGNNDGPALRARLPERADVTLAGVRFTVVHETGAAAGREARMSR HHHHHHCCCEEEEEEEECCCCCCEEEECCCCCCCEEEEEEEEEEEECCCCCCCHHHHHHH RYPDSQVLVFGHSHIPWDTTTRTGLRLLNPGSPTDRRRQPFCTYLTACAADGAVSDVVLH CCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHH RLTK HHCC >Mature Secondary Structure MVYAAALVRVTAPGTHNGRVRLLLIADTHIPGRARDLPAQVWDEVAGADVVIHAGDWTAP CEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHCCCEEEEECCCCCCH EFFDELDGRAARLVACWGNNDGPALRARLPERADVTLAGVRFTVVHETGAAAGREARMSR HHHHHHCCCEEEEEEEECCCCCCEEEECCCCCCCEEEEEEEEEEEECCCCCCCHHHHHHH RYPDSQVLVFGHSHIPWDTTTRTGLRLLNPGSPTDRRRQPFCTYLTACAADGAVSDVVLH CCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHH RLTK HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]