| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is treS [H]
Identifier: 41409626
GI number: 41409626
Start: 3931089
End: 3932861
Strand: Direct
Name: treS [H]
Synonym: MAP3528
Alternate gene names: 41409626
Gene position: 3931089-3932861 (Clockwise)
Preceding gene: 41409625
Following gene: 41409627
Centisome position: 81.39
GC content: 66.67
Gene sequence:
>1773_bases ATGAACGACGCAAGAGAAGCTGTCGAACACCATCCCGAGGAAGGCAGTCACGTCCAGGACGGTGTCGTCGAGCACCCCGA GGCCGAGGACTTCGACAACGCCGCCGCGCTGCCCACCGACCCGACGTGGTTCAAGCACGCCGTGTTCTACGAGGTGCTGG TCCGCGCGTTCTTCGACGCCAACGCCGACGGCGCCGGCGACCTGCGCGGTCTGCTGGCGCAGCTGGACTACCTGCAGTGG CTGGGCATCGACTGCATCTGGCTGCCCCCGTTCTACGACTCGCCGCTGCGCGACGGCGGTTACGACATCCGGGATTTCTA CAAGGTGCTGCCGGAGTTCGGCACGGTCGAGGATTTCGTGGCGCTGCTCAACGCCGCGCACGAGCGGGGCATCCGGGTGA TCACCGACCTGGTGATGAATCACACGTCGGAGTCGCACCCCTGGTTCCAGGAGTCCCGGCACGACCCCGACGGACCGTAC GGCGACTTCTACGTGTGGAGCGACACCAGCGACCGCTACGCCGATGCCCGCATCATCTTCGTCGACACCGAGGAGTCCAA CTGGACGTTCGACCCGGTGCGCCGCCAGTTTTACTGGCACCGGTTCTTCTCCCACCAGCCCGACCTGAACTACGACAACC CGGCCGTGCAGGAAGCCATGATCGACGTGATCCGGTTCTGGCTCGGGCTGGGAATCGACGGGTTCCGGCTGGACGCGGTG CCCTACCTGTTCGAGCGGGAGGGCACCAACTGCGAGAACCTGCCGGAGACGCACGCCTTCCTCAAGCGGGTCCGCAAGGT CGTCGACGACGAGTTCCCGGGCCGGGTGTTGCTGGCCGAGGCCAACCAGTGGCCGGCCGACGTGGTCGAGTATTTCGGCG ACCCCAGCACCGGCGGCGACGAATGCCACATGGCGTTCCACTTCCCGCTGATGCCGCGCATCTTCATGGCCGTGCGCCGC GAGTCGCGATTCCCGATCTCGGAGATCCTGGCCCAGACGCCGCAGATCCCCGAGATGGCGCAGTGGGGGATCTTCCTGCG CAACCACGACGAGTTGACGCTGGAGATGGTCACCGACGAAGAGCGCGACTACATGTACGCCGAGTACGCCAAGGATCCGC GGATGAAGGCCAACGTCGGCATCCGCCGCCGGCTGGCGCCGCTGCTGGACAACGACCGCAACCAGATCGAGCTGTTCACC GCCCTGCTGCTGTCCCTGCCCGGCTCGCCGGTGCTCTACTACGGCGACGAGATCGGCATGGGCGACGTGATCTGGCTGGG GGATCGCGACGGGGTGCGCACGCCGATGCAGTGGACGCCGGACCGCAACGCCGGCTTCTCCAAGGCCAACCCCGGCCGGC TGTATCTGCCACCCAGCCAGGACCCGGTGTACGGCTACCAGGCGGTCAACGTGGAGGCGCAACGCGACACCTCGACGTCG CTGCTCAACTTCACCCGCACCATGCTCGCCGTGCGGCGCCGGCACGAGGCCTTCGCGATCGGCACGTTCGAGGAGCTCGG CGGATCCAACCCGTCGGTGCTGGCGTTCGTGCGGCAGGTGTCCAACGACGGGGACACCGTGCTGTGCGTCAACAACCTGT CGCGGTTCCCGCAGCCGATCGAGCTGAATCTGCAGCACTGGAGCGGGTGCATCCCGGTCGAGCTGACCGGGCACGTGGAA TTCCCCCGCATCGGGCACCTGCCCTACCTGCTGACGCTGCCGGGGCACGGTTTCTATTGGTTCCAGCTGACCGCATGCGA GGAGGACACATGA
Upstream 100 bases:
>100_bases GTCGGTGGCCAATTCGCTTGGCACCGGGCGTGATTCGTCGCGGCCGGGCGAGGGGGGTTCCGAAACTCGCACTCAGGGTA CCCGTGGCATCGTGGATTCG
Downstream 100 bases:
>100_bases CTCGCGCCGCGACGGTACACAGCGTTAGGTATGAGAAGGAGCGGCGCAGATGACCGAACCCGCCAAGCTGCCGTGGTCCG ATTGGCTTCCGCAGCAACGT
Product: hypothetical protein
Products: NA
Alternate protein names: Maltose alpha-D-glucosyltransferase [H]
Number of amino acids: Translated: 590; Mature: 590
Protein sequence:
>590_residues MNDAREAVEHHPEEGSHVQDGVVEHPEAEDFDNAAALPTDPTWFKHAVFYEVLVRAFFDANADGAGDLRGLLAQLDYLQW LGIDCIWLPPFYDSPLRDGGYDIRDFYKVLPEFGTVEDFVALLNAAHERGIRVITDLVMNHTSESHPWFQESRHDPDGPY GDFYVWSDTSDRYADARIIFVDTEESNWTFDPVRRQFYWHRFFSHQPDLNYDNPAVQEAMIDVIRFWLGLGIDGFRLDAV PYLFEREGTNCENLPETHAFLKRVRKVVDDEFPGRVLLAEANQWPADVVEYFGDPSTGGDECHMAFHFPLMPRIFMAVRR ESRFPISEILAQTPQIPEMAQWGIFLRNHDELTLEMVTDEERDYMYAEYAKDPRMKANVGIRRRLAPLLDNDRNQIELFT ALLLSLPGSPVLYYGDEIGMGDVIWLGDRDGVRTPMQWTPDRNAGFSKANPGRLYLPPSQDPVYGYQAVNVEAQRDTSTS LLNFTRTMLAVRRRHEAFAIGTFEELGGSNPSVLAFVRQVSNDGDTVLCVNNLSRFPQPIELNLQHWSGCIPVELTGHVE FPRIGHLPYLLTLPGHGFYWFQLTACEEDT
Sequences:
>Translated_590_residues MNDAREAVEHHPEEGSHVQDGVVEHPEAEDFDNAAALPTDPTWFKHAVFYEVLVRAFFDANADGAGDLRGLLAQLDYLQW LGIDCIWLPPFYDSPLRDGGYDIRDFYKVLPEFGTVEDFVALLNAAHERGIRVITDLVMNHTSESHPWFQESRHDPDGPY GDFYVWSDTSDRYADARIIFVDTEESNWTFDPVRRQFYWHRFFSHQPDLNYDNPAVQEAMIDVIRFWLGLGIDGFRLDAV PYLFEREGTNCENLPETHAFLKRVRKVVDDEFPGRVLLAEANQWPADVVEYFGDPSTGGDECHMAFHFPLMPRIFMAVRR ESRFPISEILAQTPQIPEMAQWGIFLRNHDELTLEMVTDEERDYMYAEYAKDPRMKANVGIRRRLAPLLDNDRNQIELFT ALLLSLPGSPVLYYGDEIGMGDVIWLGDRDGVRTPMQWTPDRNAGFSKANPGRLYLPPSQDPVYGYQAVNVEAQRDTSTS LLNFTRTMLAVRRRHEAFAIGTFEELGGSNPSVLAFVRQVSNDGDTVLCVNNLSRFPQPIELNLQHWSGCIPVELTGHVE FPRIGHLPYLLTLPGHGFYWFQLTACEEDT >Mature_590_residues MNDAREAVEHHPEEGSHVQDGVVEHPEAEDFDNAAALPTDPTWFKHAVFYEVLVRAFFDANADGAGDLRGLLAQLDYLQW LGIDCIWLPPFYDSPLRDGGYDIRDFYKVLPEFGTVEDFVALLNAAHERGIRVITDLVMNHTSESHPWFQESRHDPDGPY GDFYVWSDTSDRYADARIIFVDTEESNWTFDPVRRQFYWHRFFSHQPDLNYDNPAVQEAMIDVIRFWLGLGIDGFRLDAV PYLFEREGTNCENLPETHAFLKRVRKVVDDEFPGRVLLAEANQWPADVVEYFGDPSTGGDECHMAFHFPLMPRIFMAVRR ESRFPISEILAQTPQIPEMAQWGIFLRNHDELTLEMVTDEERDYMYAEYAKDPRMKANVGIRRRLAPLLDNDRNQIELFT ALLLSLPGSPVLYYGDEIGMGDVIWLGDRDGVRTPMQWTPDRNAGFSKANPGRLYLPPSQDPVYGYQAVNVEAQRDTSTS LLNFTRTMLAVRRRHEAFAIGTFEELGGSNPSVLAFVRQVSNDGDTVLCVNNLSRFPQPIELNLQHWSGCIPVELTGHVE FPRIGHLPYLLTLPGHGFYWFQLTACEEDT
Specific function: Catalyzes the conversion of maltose into alpha,alpha- trehalose by transglucosylation [H]
COG id: COG0366
COG function: function code G; Glycosidases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 13 family [H]
Homologues:
Organism=Homo sapiens, GI187423904, Length=551, Percent_Identity=29.4010889292196, Blast_Score=229, Evalue=4e-60, Organism=Escherichia coli, GI1790687, Length=553, Percent_Identity=28.0289330922242, Blast_Score=212, Evalue=6e-56, Organism=Escherichia coli, GI87081873, Length=500, Percent_Identity=26.4, Blast_Score=128, Evalue=9e-31, Organism=Escherichia coli, GI1786604, Length=513, Percent_Identity=23.9766081871345, Blast_Score=96, Evalue=8e-21, Organism=Caenorhabditis elegans, GI32565753, Length=522, Percent_Identity=24.5210727969349, Blast_Score=118, Evalue=1e-26, Organism=Caenorhabditis elegans, GI25147709, Length=217, Percent_Identity=30.4147465437788, Blast_Score=89, Evalue=6e-18, Organism=Saccharomyces cerevisiae, GI6321726, Length=571, Percent_Identity=29.5971978984238, Blast_Score=198, Evalue=2e-51, Organism=Saccharomyces cerevisiae, GI6321731, Length=608, Percent_Identity=26.3157894736842, Blast_Score=190, Evalue=7e-49, Organism=Saccharomyces cerevisiae, GI6319776, Length=609, Percent_Identity=26.4367816091954, Blast_Score=189, Evalue=1e-48, Organism=Saccharomyces cerevisiae, GI6322245, Length=563, Percent_Identity=26.6429840142096, Blast_Score=181, Evalue=4e-46, Organism=Saccharomyces cerevisiae, GI6322241, Length=213, Percent_Identity=40.8450704225352, Blast_Score=177, Evalue=6e-45, Organism=Saccharomyces cerevisiae, GI6322021, Length=213, Percent_Identity=40.8450704225352, Blast_Score=177, Evalue=6e-45, Organism=Saccharomyces cerevisiae, GI6324416, Length=212, Percent_Identity=41.0377358490566, Blast_Score=176, Evalue=7e-45, Organism=Drosophila melanogaster, GI24586593, Length=574, Percent_Identity=31.5331010452962, Blast_Score=244, Evalue=2e-64, Organism=Drosophila melanogaster, GI24586587, Length=524, Percent_Identity=32.824427480916, Blast_Score=242, Evalue=5e-64, Organism=Drosophila melanogaster, GI24583745, Length=556, Percent_Identity=31.6546762589928, Blast_Score=240, Evalue=2e-63, Organism=Drosophila melanogaster, GI24583749, Length=556, Percent_Identity=31.8345323741007, Blast_Score=239, Evalue=5e-63, Organism=Drosophila melanogaster, GI24583747, Length=556, Percent_Identity=31.8345323741007, Blast_Score=238, Evalue=6e-63, Organism=Drosophila melanogaster, GI45549022, Length=560, Percent_Identity=30.7142857142857, Blast_Score=231, Evalue=8e-61, Organism=Drosophila melanogaster, GI24586597, Length=572, Percent_Identity=30.9440559440559, Blast_Score=231, Evalue=1e-60, Organism=Drosophila melanogaster, GI24586599, Length=579, Percent_Identity=30.0518134715026, Blast_Score=226, Evalue=3e-59, Organism=Drosophila melanogaster, GI24586589, Length=547, Percent_Identity=31.9926873857404, Blast_Score=222, Evalue=6e-58, Organism=Drosophila melanogaster, GI221330053, Length=576, Percent_Identity=29.3402777777778, Blast_Score=220, Evalue=2e-57, Organism=Drosophila melanogaster, GI24586591, Length=569, Percent_Identity=29.5254833040422, Blast_Score=215, Evalue=6e-56, Organism=Drosophila melanogaster, GI281360393, Length=508, Percent_Identity=29.9212598425197, Blast_Score=186, Evalue=3e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013780 - InterPro: IPR006047 - InterPro: IPR006589 - InterPro: IPR017853 - InterPro: IPR013781 - InterPro: IPR012810 [H]
Pfam domain/function: PF00128 Alpha-amylase [H]
EC number: =5.4.99.16 [H]
Molecular weight: Translated: 67665; Mature: 67665
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDAREAVEHHPEEGSHVQDGVVEHPEAEDFDNAAALPTDPTWFKHAVFYEVLVRAFFDA CCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC NADGAGDLRGLLAQLDYLQWLGIDCIWLPPFYDSPLRDGGYDIRDFYKVLPEFGTVEDFV CCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHH ALLNAAHERGIRVITDLVMNHTSESHPWFQESRHDPDGPYGDFYVWSDTSDRYADARIIF HHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCEEEECCCCCCCCCEEEEE VDTEESNWTFDPVRRQFYWHRFFSHQPDLNYDNPAVQEAMIDVIRFWLGLGIDGFRLDAV EECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCC PYLFEREGTNCENLPETHAFLKRVRKVVDDEFPGRVLLAEANQWPADVVEYFGDPSTGGD CHHEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHCCCCCCCCC ECHMAFHFPLMPRIFMAVRRESRFPISEILAQTPQIPEMAQWGIFLRNHDELTLEMVTDE CEEEEEECCHHHHHHHHHHHCCCCCHHHHHHCCCCCCCHHHCCEEEECCCCEEEEEECCC ERDYMYAEYAKDPRMKANVGIRRRLAPLLDNDRNQIELFTALLLSLPGSPVLYYGDEIGM CCCEEHHHHCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEECCCCCC GDVIWLGDRDGVRTPMQWTPDRNAGFSKANPGRLYLPPSQDPVYGYQAVNVEAQRDTSTS CCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEEEECCCCHHH LLNFTRTMLAVRRRHEAFAIGTFEELGGSNPSVLAFVRQVSNDGDTVLCVNNLSRFPQPI HHHHHHHHHHHHHHCCEEEEECHHHHCCCCCHHHHHHHHHCCCCCEEEEECCHHHCCCCE ELNLQHWSGCIPVELTGHVEFPRIGHLPYLLTLPGHGFYWFQLTACEEDT EEEHHHCCCEEEEEEECCCCCCCCCCCCEEEEECCCCEEEEEEEECCCCC >Mature Secondary Structure MNDAREAVEHHPEEGSHVQDGVVEHPEAEDFDNAAALPTDPTWFKHAVFYEVLVRAFFDA CCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC NADGAGDLRGLLAQLDYLQWLGIDCIWLPPFYDSPLRDGGYDIRDFYKVLPEFGTVEDFV CCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHH ALLNAAHERGIRVITDLVMNHTSESHPWFQESRHDPDGPYGDFYVWSDTSDRYADARIIF HHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCEEEECCCCCCCCCEEEEE VDTEESNWTFDPVRRQFYWHRFFSHQPDLNYDNPAVQEAMIDVIRFWLGLGIDGFRLDAV EECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCC PYLFEREGTNCENLPETHAFLKRVRKVVDDEFPGRVLLAEANQWPADVVEYFGDPSTGGD CHHEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHCCCCCCCCC ECHMAFHFPLMPRIFMAVRRESRFPISEILAQTPQIPEMAQWGIFLRNHDELTLEMVTDE CEEEEEECCHHHHHHHHHHHCCCCCHHHHHHCCCCCCCHHHCCEEEECCCCEEEEEECCC ERDYMYAEYAKDPRMKANVGIRRRLAPLLDNDRNQIELFTALLLSLPGSPVLYYGDEIGM CCCEEHHHHCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEECCCCCC GDVIWLGDRDGVRTPMQWTPDRNAGFSKANPGRLYLPPSQDPVYGYQAVNVEAQRDTSTS CCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEEEECCCCHHH LLNFTRTMLAVRRRHEAFAIGTFEELGGSNPSVLAFVRQVSNDGDTVLCVNNLSRFPQPI HHHHHHHHHHHHHHCCEEEEECHHHHCCCCCHHHHHHHHHCCCCCEEEEECCHHHCCCCE ELNLQHWSGCIPVELTGHVEFPRIGHLPYLLTLPGHGFYWFQLTACEEDT EEEHHHCCCEEEEEEECCCCCCCCCCCCEEEEECCCCEEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8645698 [H]