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The map label for this gene is yeaW [H]

Identifier: 41409606

GI number: 41409606

Start: 3904866

End: 3906269

Strand: Direct

Name: yeaW [H]

Synonym: MAP3508

Alternate gene names: 41409606

Gene position: 3904866-3906269 (Clockwise)

Preceding gene: 41409605

Following gene: 41409607

Centisome position: 80.85

GC content: 65.6

Gene sequence:

>1404_bases
GTGATGACCGACGTTGCCAAGGACGCGAATTCCGCGGTGGCAGAAGAACTCTCCACGCCGATGACGATCGGGGTGGAGGC
GTACATCAGCGAGGACTATGCCCGCGCCGAGCGCGACAAGCTGTGGCGCAAGGTCTGGCAGCAGGTCGGCCGCGTCGAGG
AACTGCCCGAGGTGGGCAGCTATCTGACCTACGACATTCTGGACGACTCGATCATCGTGGTGCGCACCGGCGCGAACGAG
TTTCGCGCCCACCACAACGTGTGCATGCACCGCGGCCGGCGGCTGATCGACACCCCCGAGGGCGCCAAGAACGCGCTCGG
ACGCACCCGCAAGTCGTTCGTCTGCGGCTTTCACGGCTGGACCTACGGCCTGGACGGCGCCTGCACACACATTCGCGAGC
AACAGGATTGGCGGCAGGCCCTCACGCCCGACAACACCCATCTGCGGCCCGTCAGGGTCGACACCTGGGGCGGCTGGCTG
TGGATCAACATGGACCCCGACTGCGAGCCGCTGGCCGACTACCTGTTCCCCGCCGCGAAGATTCTCGAGCCGTTCGGGCT
GGAGAACATGCGCTACAAGTGGCGCAAGTGGCTCTACTTCGACTGCAACTGGAAGGTCGCGCTGGAGGCGTTCAACGAGA
CCTACCACGTCTACACCACCCATCCCGAGTTCAACAAGTTCGGCGAGTTCAAGGGGTGGGCGAAAGCCCAAGGCAGGCAT
AGCAACATCGGCTACGACGCGCCCGAGGACATGGAGGCCACCAAGTCCAAGATCCGGCTGGGCATCGGCGCCGACCCGCG
GGTGTCGACCGCCGAGATGCAGGTGTACACCATGGAGGAGACCAACGCCACCACCACCCAGACCCTGGTGAACGCCGCCA
AGCGGCTGGTCGACGAGTTGCCCGAGGGCACCCCGGCCGACAAGGTCCTCGAGCACTGGCTGGCGTCGGCCCGCCGCGAC
GACGAGGCGCGCGGCGTGATCTGGCCGACCATCCCGCCCGACATCCTCGGGCAGGCCGGCACCGCGTGGCAGATCTTCCC
CAATTTCCAGATCGGGCAGGGCCTGACCAGCGCGCTGTGCTACGGAGCGCGGCCGCACCCCAGCTACAACCCCGACAAGT
GCATCTTCGAGGTCTCGGTGTTCGAGCTGTACCCCAAAGGCGAAGAGCCACAAACGGAATGGGAATACACCCCGGTCGGT
GACCCGCGATGGCGTTCTGTGCTGCCGCAGGACTTCTCCAACATGGCCGCCGTGCAGCAGGGCATGAAGTCACTCGGCTT
CCCGGGCACCAAGCCCAACCCCTACCGGGAGCGCAGCACGGTCAACCTGCACTACCAATTGTCGCGGTACATGGGTACCG
GTGCGCCCCGGGAACTCTCAGACAAGGAGCACCCACTGGCATGA

Upstream 100 bases:

>100_bases
TCGTCGACGGCGGGCTGGACCTGCGATGGAGTCACCTCGGCGCCGACAACACGTCGCTGTTCCTGCATGACGAATCCTTC
CGCGCAACGATCAGGAGGAT

Downstream 100 bases:

>100_bases
CCCCCGACGTGGACACGCAGCAGGACGGTTGCGGGCCGACCGAGACGCCCGACGACATCGACATCGACGCGCTGCGGCAG
AAATACGCCCACGAGCGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 467; Mature: 467

Protein sequence:

>467_residues
MMTDVAKDANSAVAEELSTPMTIGVEAYISEDYARAERDKLWRKVWQQVGRVEELPEVGSYLTYDILDDSIIVVRTGANE
FRAHHNVCMHRGRRLIDTPEGAKNALGRTRKSFVCGFHGWTYGLDGACTHIREQQDWRQALTPDNTHLRPVRVDTWGGWL
WINMDPDCEPLADYLFPAAKILEPFGLENMRYKWRKWLYFDCNWKVALEAFNETYHVYTTHPEFNKFGEFKGWAKAQGRH
SNIGYDAPEDMEATKSKIRLGIGADPRVSTAEMQVYTMEETNATTTQTLVNAAKRLVDELPEGTPADKVLEHWLASARRD
DEARGVIWPTIPPDILGQAGTAWQIFPNFQIGQGLTSALCYGARPHPSYNPDKCIFEVSVFELYPKGEEPQTEWEYTPVG
DPRWRSVLPQDFSNMAAVQQGMKSLGFPGTKPNPYRERSTVNLHYQLSRYMGTGAPRELSDKEHPLA

Sequences:

>Translated_467_residues
MMTDVAKDANSAVAEELSTPMTIGVEAYISEDYARAERDKLWRKVWQQVGRVEELPEVGSYLTYDILDDSIIVVRTGANE
FRAHHNVCMHRGRRLIDTPEGAKNALGRTRKSFVCGFHGWTYGLDGACTHIREQQDWRQALTPDNTHLRPVRVDTWGGWL
WINMDPDCEPLADYLFPAAKILEPFGLENMRYKWRKWLYFDCNWKVALEAFNETYHVYTTHPEFNKFGEFKGWAKAQGRH
SNIGYDAPEDMEATKSKIRLGIGADPRVSTAEMQVYTMEETNATTTQTLVNAAKRLVDELPEGTPADKVLEHWLASARRD
DEARGVIWPTIPPDILGQAGTAWQIFPNFQIGQGLTSALCYGARPHPSYNPDKCIFEVSVFELYPKGEEPQTEWEYTPVG
DPRWRSVLPQDFSNMAAVQQGMKSLGFPGTKPNPYRERSTVNLHYQLSRYMGTGAPRELSDKEHPLA
>Mature_467_residues
MMTDVAKDANSAVAEELSTPMTIGVEAYISEDYARAERDKLWRKVWQQVGRVEELPEVGSYLTYDILDDSIIVVRTGANE
FRAHHNVCMHRGRRLIDTPEGAKNALGRTRKSFVCGFHGWTYGLDGACTHIREQQDWRQALTPDNTHLRPVRVDTWGGWL
WINMDPDCEPLADYLFPAAKILEPFGLENMRYKWRKWLYFDCNWKVALEAFNETYHVYTTHPEFNKFGEFKGWAKAQGRH
SNIGYDAPEDMEATKSKIRLGIGADPRVSTAEMQVYTMEETNATTTQTLVNAAKRLVDELPEGTPADKVLEHWLASARRD
DEARGVIWPTIPPDILGQAGTAWQIFPNFQIGQGLTSALCYGARPHPSYNPDKCIFEVSVFELYPKGEEPQTEWEYTPVG
DPRWRSVLPQDFSNMAAVQQGMKSLGFPGTKPNPYRERSTVNLHYQLSRYMGTGAPRELSDKEHPLA

Specific function: Unknown

COG id: COG4638

COG function: function code PR; Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Escherichia coli, GI1788103, Length=206, Percent_Identity=30.5825242718447, Blast_Score=104, Evalue=1e-23,
Organism=Escherichia coli, GI1788888, Length=202, Percent_Identity=26.7326732673267, Blast_Score=74, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941
- InterPro:   IPR015881
- InterPro:   IPR001663 [H]

Pfam domain/function: PF00355 Rieske [H]

EC number: 1.14.1.- [C]

Molecular weight: Translated: 53228; Mature: 53228

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTDVAKDANSAVAEELSTPMTIGVEAYISEDYARAERDKLWRKVWQQVGRVEELPEVGS
CCCCHHCCHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
YLTYDILDDSIIVVRTGANEFRAHHNVCMHRGRRLIDTPEGAKNALGRTRKSFVCGFHGW
EEEEEECCCCEEEEECCCHHHHHHHHHHHHCCCEECCCCCHHHHHHHHCHHHEEEEECCC
TYGLDGACTHIREQQDWRQALTPDNTHLRPVRVDTWGGWLWINMDPDCEPLADYLFPAAK
CCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEECCCCHHHHHHHHHHHHH
ILEPFGLENMRYKWRKWLYFDCNWKVALEAFNETYHVYTTHPEFNKFGEFKGWAKAQGRH
HHCCCCCCHHHHEEEEEEEEECCCEEEEEECCCEEEEEECCCCHHHCCCCCCHHHCCCCC
SNIGYDAPEDMEATKSKIRLGIGADPRVSTAEMQVYTMEETNATTTQTLVNAAKRLVDEL
CCCCCCCCCHHHHHHHHEEECCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHC
PEGTPADKVLEHWLASARRDDEARGVIWPTIPPDILGQAGTAWQIFPNFQIGQGLTSALC
CCCCCHHHHHHHHHHHHCCCCCCCCEECCCCCHHHHCCCCCEEEEECCCCHHCCHHHHHH
YGARPHPSYNPDKCIFEVSVFELYPKGEEPQTEWEYTPVGDPRWRSVLPQDFSNMAAVQQ
CCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHCHHHHHHHHHHHH
GMKSLGFPGTKPNPYRERSTVNLHYQLSRYMGTGAPRELSDKEHPLA
HHHHHCCCCCCCCCCCCCCEEEEEEEEHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MMTDVAKDANSAVAEELSTPMTIGVEAYISEDYARAERDKLWRKVWQQVGRVEELPEVGS
CCCCHHCCHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
YLTYDILDDSIIVVRTGANEFRAHHNVCMHRGRRLIDTPEGAKNALGRTRKSFVCGFHGW
EEEEEECCCCEEEEECCCHHHHHHHHHHHHCCCEECCCCCHHHHHHHHCHHHEEEEECCC
TYGLDGACTHIREQQDWRQALTPDNTHLRPVRVDTWGGWLWINMDPDCEPLADYLFPAAK
CCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEECCCCHHHHHHHHHHHHH
ILEPFGLENMRYKWRKWLYFDCNWKVALEAFNETYHVYTTHPEFNKFGEFKGWAKAQGRH
HHCCCCCCHHHHEEEEEEEEECCCEEEEEECCCEEEEEECCCCHHHCCCCCCHHHCCCCC
SNIGYDAPEDMEATKSKIRLGIGADPRVSTAEMQVYTMEETNATTTQTLVNAAKRLVDEL
CCCCCCCCCHHHHHHHHEEECCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHC
PEGTPADKVLEHWLASARRDDEARGVIWPTIPPDILGQAGTAWQIFPNFQIGQGLTSALC
CCCCCHHHHHHHHHHHHCCCCCCCCEECCCCCHHHHCCCCCEEEEECCCCHHCCHHHHHH
YGARPHPSYNPDKCIFEVSVFELYPKGEEPQTEWEYTPVGDPRWRSVLPQDFSNMAAVQQ
CCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHCHHHHHHHHHHHH
GMKSLGFPGTKPNPYRERSTVNLHYQLSRYMGTGAPRELSDKEHPLA
HHHHHCCCCCCCCCCCCCCEEEEEEEEHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]