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The map label for this gene is 41409585

Identifier: 41409585

GI number: 41409585

Start: 3875861

End: 3877444

Strand: Reverse

Name: 41409585

Synonym: MAP3487c

Alternate gene names: NA

Gene position: 3877444-3875861 (Counterclockwise)

Preceding gene: 41409586

Following gene: 41409577

Centisome position: 80.28

GC content: 75.06

Gene sequence:

>1584_bases
GTGGTAACCCCTTCTGGTTCAAGGGTTTTGGCGATCTGGTGCATGGACTGGCCCGCGGTGGCGGCGGCGGCCGCCGCGGA
GCTGCCAGCCACCGCCCCGGTCGCGGTCACGTTGGCCAACCGGGTGATCGCCTGCTCGTCGGCCGCCCGCGCGGCCGGGG
TGCGGCGGGGCCTGCGCCGCCGGGAGGCGGCGGCCCGGTGCCCGCAACTGCATGTCAGCACCGCCGACGCGGACCGCGAC
GCCCGCTTCTTCGAAGCGGTGATCGCGGCGGTGGACGACCTGGTGCCTCGCGCCGAGGTGCTGCGGCCCGGGCTGCTGGT
GCTGCCGGTGCGCGGGGCGGCCCGCTACTTCGGGTCCGAGGAGGCCGCGGCCGAGCGGCTGGTCGACGCGGTGGCCGTGA
GCTCCGTGGCCGGCGCCGAGTGCCAGGTCGGGATCGCCGACCGGTTGTCCACCGCGGTCCTGGCGGCGCGGGCGGGCCGG
ATCGTGGAGCCGGGAGGCGACGCGAAGTTCCTGTCGGTGCTGTCCGTCCGCCAACTCGCCACCGAGCCGAGCCTGTCCGG
CCCCGGCCGCGAAGAGCTGACGGACCTGTTGTGGCGGATGGGAATTCGCACCATCGGGCAGTTCGCCGCACTGGCCCGCG
GCGACGTGGCGTCCCGGTTCGGCGCCGACGGGGTGGCCGCGCACCGGCTGGCCCGCGGCGAACCCGAACGGCCGCCCTCC
GGGCGGGAACCCCCGGCCGAGCTCGAGGCCGTGCTGGACTGCGACCCGCCGATCGACCGGGTGGACGCCGCGGCGTTCGC
CGGGCGCTCGCTGGCCGGCACGCTGCATCAGGCGCTGATGGCCGCCGGTGTGGGCTGCACCCGGCTGGCCATTCACGCCG
CCACCGGGAGCGGCGAAGAACGCCACCGGGTGTGGCGGTGCGCCGAGCCGTTGACCGAGGACGCCACCGCCGACCGGGTG
CGCTGGCAACTGGACGGCTGGTTGAGCAACCGCACCGCGCGCGATCGTCCCACCGCCCCGGTGACGCTGTTGCGGCTGCG
GGCGGTGGAGGTGGTCTCCGCCGAGGCGCTGCAGTTGCCGCTCTGGGGCGGCCTGGGGGAGGAGGACCGGCTGCGGGCCC
GCCGGGCGCTGGTGCGGGTGCAGGGCTTGCTCGGCCCGGAGGCGGTGCAGGTGCCGGTGCGCTCTGGTGGCCGCGGCCCG
GCCGAGCGCATCACCTTGATCCCGCTCGGCGACGAGCCGGTGCCGCAGGCCGATCCCGACCTGCCGTGGCCCGGCCGGCT
GCCCGAGCCGTCACCGGCGGTGTTGCTCGACGATCCGGTGGAATTGCTTGACGCCCAAGGTAATCCGATACGTGTCAGCA
GTCGGGGGCTGTTCTCCGCCGACCCTGCGCGCCTGGTCGTTCACGGCCGGGGCGAGCGGCTGTGCTGGTGGGGCGGGCCC
TGGCCGGTCGACGAGCGGTGGTGGGACGACCGGGGTCAGGGTGGGGGCCGTACCGCCCGCGCGCAGGTTCTGCTGGAAAG
CGAACGCGCGCTGCTGCTGTGCTACCGGCAAAGGAGGTGGTATTTGGAGGGAAGCTACGAATAA

Upstream 100 bases:

>100_bases
CGCCCCGGGGTTCGGGCGCATCAGCGGGGTGCGGCTGCAGGTCAGCGGGATGTGCGCGGGACGGCGGGTGGCGGCCCAGG
CGCGGGCGGGGTGAATTCCG

Downstream 100 bases:

>100_bases
CGTTGTGGTGCAACATGTTCGACGCGGCGAAGCGCGTCCGGCGTCAGGTCCTTCAGCGAGGGGTAGCCGTCGACGGCCAT
GATCAGGTCGGCCTCGGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: DNA Polymerase Involved In DNA Repair; DNA-Repair Protein; DNA Polymerase; UMUC Domain-Containing Protein DNA-Repair Protein; UMUC Domain Protein DNA-Repair Protein; DNA Repair Nucleotidyltransferase/DNA Polymerase; DNA Repair Polymerase

Number of amino acids: Translated: 527; Mature: 527

Protein sequence:

>527_residues
MVTPSGSRVLAIWCMDWPAVAAAAAAELPATAPVAVTLANRVIACSSAARAAGVRRGLRRREAAARCPQLHVSTADADRD
ARFFEAVIAAVDDLVPRAEVLRPGLLVLPVRGAARYFGSEEAAAERLVDAVAVSSVAGAECQVGIADRLSTAVLAARAGR
IVEPGGDAKFLSVLSVRQLATEPSLSGPGREELTDLLWRMGIRTIGQFAALARGDVASRFGADGVAAHRLARGEPERPPS
GREPPAELEAVLDCDPPIDRVDAAAFAGRSLAGTLHQALMAAGVGCTRLAIHAATGSGEERHRVWRCAEPLTEDATADRV
RWQLDGWLSNRTARDRPTAPVTLLRLRAVEVVSAEALQLPLWGGLGEEDRLRARRALVRVQGLLGPEAVQVPVRSGGRGP
AERITLIPLGDEPVPQADPDLPWPGRLPEPSPAVLLDDPVELLDAQGNPIRVSSRGLFSADPARLVVHGRGERLCWWGGP
WPVDERWWDDRGQGGGRTARAQVLLESERALLLCYRQRRWYLEGSYE

Sequences:

>Translated_527_residues
MVTPSGSRVLAIWCMDWPAVAAAAAAELPATAPVAVTLANRVIACSSAARAAGVRRGLRRREAAARCPQLHVSTADADRD
ARFFEAVIAAVDDLVPRAEVLRPGLLVLPVRGAARYFGSEEAAAERLVDAVAVSSVAGAECQVGIADRLSTAVLAARAGR
IVEPGGDAKFLSVLSVRQLATEPSLSGPGREELTDLLWRMGIRTIGQFAALARGDVASRFGADGVAAHRLARGEPERPPS
GREPPAELEAVLDCDPPIDRVDAAAFAGRSLAGTLHQALMAAGVGCTRLAIHAATGSGEERHRVWRCAEPLTEDATADRV
RWQLDGWLSNRTARDRPTAPVTLLRLRAVEVVSAEALQLPLWGGLGEEDRLRARRALVRVQGLLGPEAVQVPVRSGGRGP
AERITLIPLGDEPVPQADPDLPWPGRLPEPSPAVLLDDPVELLDAQGNPIRVSSRGLFSADPARLVVHGRGERLCWWGGP
WPVDERWWDDRGQGGGRTARAQVLLESERALLLCYRQRRWYLEGSYE
>Mature_527_residues
MVTPSGSRVLAIWCMDWPAVAAAAAAELPATAPVAVTLANRVIACSSAARAAGVRRGLRRREAAARCPQLHVSTADADRD
ARFFEAVIAAVDDLVPRAEVLRPGLLVLPVRGAARYFGSEEAAAERLVDAVAVSSVAGAECQVGIADRLSTAVLAARAGR
IVEPGGDAKFLSVLSVRQLATEPSLSGPGREELTDLLWRMGIRTIGQFAALARGDVASRFGADGVAAHRLARGEPERPPS
GREPPAELEAVLDCDPPIDRVDAAAFAGRSLAGTLHQALMAAGVGCTRLAIHAATGSGEERHRVWRCAEPLTEDATADRV
RWQLDGWLSNRTARDRPTAPVTLLRLRAVEVVSAEALQLPLWGGLGEEDRLRARRALVRVQGLLGPEAVQVPVRSGGRGP
AERITLIPLGDEPVPQADPDLPWPGRLPEPSPAVLLDDPVELLDAQGNPIRVSSRGLFSADPARLVVHGRGERLCWWGGP
WPVDERWWDDRGQGGGRTARAQVLLESERALLLCYRQRRWYLEGSYE

Specific function: Unknown

COG id: COG0389

COG function: function code L; Nucleotidyltransferase/DNA polymerase involved in DNA repair

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56482; Mature: 56482

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: PS50173 UMUC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTPSGSRVLAIWCMDWPAVAAAAAAELPATAPVAVTLANRVIACSSAARAAGVRRGLRR
CCCCCCCEEEEEEECCCHHHHHHHHHCCCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHH
REAAARCPQLHVSTADADRDARFFEAVIAAVDDLVPRAEVLRPGLLVLPVRGAARYFGSE
HHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHCCCH
EAAAERLVDAVAVSSVAGAECQVGIADRLSTAVLAARAGRIVEPGGDAKFLSVLSVRQLA
HHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHH
TEPSLSGPGREELTDLLWRMGIRTIGQFAALARGDVASRFGADGVAAHRLARGEPERPPS
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHCCCCCCCCC
GREPPAELEAVLDCDPPIDRVDAAAFAGRSLAGTLHQALMAAGVGCTRLAIHAATGSGEE
CCCCHHHHHHEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHEEEEECCCCCHH
RHRVWRCAEPLTEDATADRVRWQLDGWLSNRTARDRPTAPVTLLRLRAVEVVSAEALQLP
HHHHHHHHCCCCCCCCHHHEEEEECHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEC
LWGGLGEEDRLRARRALVRVQGLLGPEAVQVPVRSGGRGPAERITLIPLGDEPVPQADPD
CCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHEEEEEECCCCCCCCCCCC
LPWPGRLPEPSPAVLLDDPVELLDAQGNPIRVSSRGLFSADPARLVVHGRGERLCWWGGP
CCCCCCCCCCCCCEEECCCHHHHCCCCCEEEEECCCCCCCCCCEEEEECCCCEEEEECCC
WPVDERWWDDRGQGGGRTARAQVLLESERALLLCYRQRRWYLEGSYE
CCCCCCCCCCCCCCCCCCHHEEEEECCCCEEEEEECCCCEEECCCCC
>Mature Secondary Structure
MVTPSGSRVLAIWCMDWPAVAAAAAAELPATAPVAVTLANRVIACSSAARAAGVRRGLRR
CCCCCCCEEEEEEECCCHHHHHHHHHCCCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHH
REAAARCPQLHVSTADADRDARFFEAVIAAVDDLVPRAEVLRPGLLVLPVRGAARYFGSE
HHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHCCCH
EAAAERLVDAVAVSSVAGAECQVGIADRLSTAVLAARAGRIVEPGGDAKFLSVLSVRQLA
HHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHH
TEPSLSGPGREELTDLLWRMGIRTIGQFAALARGDVASRFGADGVAAHRLARGEPERPPS
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHCCCCCCCCC
GREPPAELEAVLDCDPPIDRVDAAAFAGRSLAGTLHQALMAAGVGCTRLAIHAATGSGEE
CCCCHHHHHHEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHEEEEECCCCCHH
RHRVWRCAEPLTEDATADRVRWQLDGWLSNRTARDRPTAPVTLLRLRAVEVVSAEALQLP
HHHHHHHHCCCCCCCCHHHEEEEECHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEC
LWGGLGEEDRLRARRALVRVQGLLGPEAVQVPVRSGGRGPAERITLIPLGDEPVPQADPD
CCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHEEEEEECCCCCCCCCCCC
LPWPGRLPEPSPAVLLDDPVELLDAQGNPIRVSSRGLFSADPARLVVHGRGERLCWWGGP
CCCCCCCCCCCCCEEECCCHHHHCCCCCEEEEECCCCCCCCCCEEEEECCCCEEEEECCC
WPVDERWWDDRGQGGGRTARAQVLLESERALLLCYRQRRWYLEGSYE
CCCCCCCCCCCCCCCCCCHHEEEEECCCCEEEEEECCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA