| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409577
Identifier: 41409577
GI number: 41409577
Start: 3866417
End: 3867283
Strand: Reverse
Name: 41409577
Synonym: MAP3479c
Alternate gene names: NA
Gene position: 3867283-3866417 (Counterclockwise)
Preceding gene: 41409585
Following gene: 41409574
Centisome position: 80.07
GC content: 71.16
Gene sequence:
>867_bases ATGGCGATTGACCCGAGTGCCGTCGGCGCGGTGACCGAACCCCTGCTGTTCGAATGGACCGACCGGGACACCCTGCTTTA TGCGCTCGGTGTCGGCGCCGGGGTCGACGACCTGGCCTTCACCACCGAGAACAGCCACGGCATCGACCAGCAGGTGCTTC CCACCTACGCGGTGATCTGCTGCCCGGCCTTCGGCGCGGCCGGGTTGGTCGGAAAGTTCAACTGGGCCATGCTGTTACAC GGCTCGCAGAGCATCCGGCTGCACGCGCCGCTGCCGCCGGCGGGCAAGCTCTCGGTGGTCTCGGAGGTCGCCGACATCCA GGACAAGGGCGAGGGCAAGAACGCGATCCTGGTGTTGCGCGGCCGCGGCACCGAGCCGGACTCCGGGCAGCTGATCGCCG AGACGCTGACCACCCTGGTCATCCGGGGCGAGGGCGGGTTCGGCGGGATGCCCGGGCAGCGGCCGATCGCGCCGGAATTC CCCGACCGCGAGCCCGACGCGCGGATCGCGCTGCCCACCCGGGAGGACCAGGCGCTGATCTACCGGCTCTCCGGGGACCG CAACCCGCTGCACAGCGACCCGTGGTTCGCCCGGGAACTGGCCGGCTTCCCCAAGCCGATCCTGCACGGGCTGTGCACCT ACGGGGTGTCCGGGCGGGCGCTGGTGGCCGAGCTCGGCGGCGGCGTCGCGGCCAACATCACCTCGATCGCGTCGCGGTTC ACCTCGCCGGTGTTCCCCGGCGAGACGCTGACCACGCTGATCTGGCGCACCGAGCCGGGCAAGGCGGTGTTCCGCACCGA GGCGTCGAACCCGGACGGCTCCAACACCCGGGTGGTGCTCGACGACGGCGCGGTGGAGTACGCCTAA
Upstream 100 bases:
>100_bases CAACACAGCAACCACATGAAAGCCATACCCGACGTCCCTGGGCAATTCGAAGCCTAAGGCCGACGGCCCCGAACACCCTT CAAGAAAGGTAAGGACTCCC
Downstream 100 bases:
>100_bases CCCTCGCCGCGTTCGAGCTGATCGGCCAGCCGCTCGGTGAACTCGGCGGCCCGCGCGGGACTGTCCAGCGCGAACAGGGC CGCGGTGGCGCGGTCGCCGT
Product: hypothetical protein
Products: NA
Alternate protein names: 3-Alpha 7-Alpha; MaoC-Like Dehydratase; Dehydrogenase; Acyl Dehydratase; UfaA2 Protein; MaoC-Like Domain-Containing; Enoyl-CoA Hydratase; Short-Chain Dehydrogenase/Reductase SDR; MaoC Family Protein; Hydratase; -Specific Enoyl-CoA Hydratase; 2-Enoyl Acyl-CoA Hydratase; MaoC Acyl Dehydratase; MaoC Like Dehydratase/Enoyl-CoA Hydratase; MaoC-Like-Specific Enoyl-CoA Hydratase; MaoC Domain-Containing Protein Dehydratase; MaoC-Like Domain-Containing Protein; MaoC Domain Protein Dehydratase; MaoC Family Dehydrogenase/Dehydratase; MaoC Family Dehydratase; Multifunctional; Enoyl-CoA Hydratase/3-Hydroxyacyl-CoA Dehydratase; MaoC Like Domain Protein
Number of amino acids: Translated: 288; Mature: 287
Protein sequence:
>288_residues MAIDPSAVGAVTEPLLFEWTDRDTLLYALGVGAGVDDLAFTTENSHGIDQQVLPTYAVICCPAFGAAGLVGKFNWAMLLH GSQSIRLHAPLPPAGKLSVVSEVADIQDKGEGKNAILVLRGRGTEPDSGQLIAETLTTLVIRGEGGFGGMPGQRPIAPEF PDREPDARIALPTREDQALIYRLSGDRNPLHSDPWFARELAGFPKPILHGLCTYGVSGRALVAELGGGVAANITSIASRF TSPVFPGETLTTLIWRTEPGKAVFRTEASNPDGSNTRVVLDDGAVEYA
Sequences:
>Translated_288_residues MAIDPSAVGAVTEPLLFEWTDRDTLLYALGVGAGVDDLAFTTENSHGIDQQVLPTYAVICCPAFGAAGLVGKFNWAMLLH GSQSIRLHAPLPPAGKLSVVSEVADIQDKGEGKNAILVLRGRGTEPDSGQLIAETLTTLVIRGEGGFGGMPGQRPIAPEF PDREPDARIALPTREDQALIYRLSGDRNPLHSDPWFARELAGFPKPILHGLCTYGVSGRALVAELGGGVAANITSIASRF TSPVFPGETLTTLIWRTEPGKAVFRTEASNPDGSNTRVVLDDGAVEYA >Mature_287_residues AIDPSAVGAVTEPLLFEWTDRDTLLYALGVGAGVDDLAFTTENSHGIDQQVLPTYAVICCPAFGAAGLVGKFNWAMLLHG SQSIRLHAPLPPAGKLSVVSEVADIQDKGEGKNAILVLRGRGTEPDSGQLIAETLTTLVIRGEGGFGGMPGQRPIAPEFP DREPDARIALPTREDQALIYRLSGDRNPLHSDPWFARELAGFPKPILHGLCTYGVSGRALVAELGGGVAANITSIASRFT SPVFPGETLTTLIWRTEPGKAVFRTEASNPDGSNTRVVLDDGAVEYA
Specific function: Unknown
COG id: COG2030
COG function: function code I; Acyl dehydratase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4504505, Length=275, Percent_Identity=39.2727272727273, Blast_Score=176, Evalue=2e-44, Organism=Caenorhabditis elegans, GI17532783, Length=260, Percent_Identity=41.5384615384615, Blast_Score=174, Evalue=6e-44, Organism=Saccharomyces cerevisiae, GI6322861, Length=286, Percent_Identity=37.0629370629371, Blast_Score=155, Evalue=7e-39, Organism=Drosophila melanogaster, GI18859837, Length=265, Percent_Identity=38.1132075471698, Blast_Score=159, Evalue=2e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30484; Mature: 30353
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIDPSAVGAVTEPLLFEWTDRDTLLYALGVGAGVDDLAFTTENSHGIDQQVLPTYAVIC CCCCCHHCCHHCCCEEEEECCCCEEEEEEECCCCCCCEEEECCCCCCCCHHHHHHHHEEH CPAFGAAGLVGKFNWAMLLHGSQSIRLHAPLPPAGKLSVVSEVADIQDKGEGKNAILVLR CCCCCCCCCCCCCEEEEEEECCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEE GRGTEPDSGQLIAETLTTLVIRGEGGFGGMPGQRPIAPEFPDREPDARIALPTREDQALI CCCCCCCCCCCHHHEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEE YRLSGDRNPLHSDPWFARELAGFPKPILHGLCTYGVSGRALVAELGGGVAANITSIASRF EEECCCCCCCCCCCHHHHHHCCCCHHHHHHHHHCCCCCCEEEEHHCCCHHHHHHHHHHHH TSPVFPGETLTTLIWRTEPGKAVFRTEASNPDGSNTRVVLDDGAVEYA CCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCEEEEECCCCCCC >Mature Secondary Structure AIDPSAVGAVTEPLLFEWTDRDTLLYALGVGAGVDDLAFTTENSHGIDQQVLPTYAVIC CCCCHHCCHHCCCEEEEECCCCEEEEEEECCCCCCCEEEECCCCCCCCHHHHHHHHEEH CPAFGAAGLVGKFNWAMLLHGSQSIRLHAPLPPAGKLSVVSEVADIQDKGEGKNAILVLR CCCCCCCCCCCCCEEEEEEECCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEE GRGTEPDSGQLIAETLTTLVIRGEGGFGGMPGQRPIAPEFPDREPDARIALPTREDQALI CCCCCCCCCCCHHHEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEE YRLSGDRNPLHSDPWFARELAGFPKPILHGLCTYGVSGRALVAELGGGVAANITSIASRF EEECCCCCCCCCCCHHHHHHCCCCHHHHHHHHHCCCCCCEEEEHHCCCHHHHHHHHHHHH TSPVFPGETLTTLIWRTEPGKAVFRTEASNPDGSNTRVVLDDGAVEYA CCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA