| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409581
Identifier: 41409581
GI number: 41409581
Start: 3871703
End: 3872158
Strand: Direct
Name: 41409581
Synonym: MAP3483
Alternate gene names: NA
Gene position: 3871703-3872158 (Clockwise)
Preceding gene: 41409580
Following gene: 41409582
Centisome position: 80.16
GC content: 74.78
Gene sequence:
>456_bases ATGGTAGGCAGTGCCGGCCGGACTGACATCGATCCCGTGGGAGCGGCCGCCGAACTGGTGGCCGCGACGGGCGCGGCGGT GCTGCCCGCGCTGAGTGTGACGCGCAGCCTGGGTGTGGGCCGCGAGGAGTGGACGCGGTTCGCCCGGGACCCGTTGCTGC ACAAGGTGATACGGCTGCTGTCCCGGATCGCCGCCGCCCTCGACGAGGTCGGCGAGTGGAACGTCCAGGTGCACCCGTTC CGCATCCGGTCGGCGCCGCAGGAGTGCGGCGCCGGCGGTCAACCGACGCCCGACGGCCGGCGGCTGCTGACGGCGACGCT GGCCGAGCCGGGCACCCTGCTGGTCAGCGACGACCGCCGCACCCTGCACCAGGTGTCGCCGATCCGGCCGCTCGAGGGCG ACGGCCCGGCCCGCCGGGACGTCCTGGTGATCACCTTCGCGTCCGGCCGTCCCTGA
Upstream 100 bases:
>100_bases CACACCGCGCCCGGTCAGGCGGCTGGTGCGCCTGGTCCCCGGCGTGCACTGGTGATCCGCGCACACGTTTACCCGGGCGC GATCGCGGTACTCCGGCGCG
Downstream 100 bases:
>100_bases TCGTCGCGGTATCGTGGCCGCGGTGACTCCAGTTTTCGTCGATGTCGACACCGGCGTGGATGATGCGCTGGCGCTGATGT ACCTGTTCGCCAGCCCGGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 151; Mature: 151
Protein sequence:
>151_residues MVGSAGRTDIDPVGAAAELVAATGAAVLPALSVTRSLGVGREEWTRFARDPLLHKVIRLLSRIAAALDEVGEWNVQVHPF RIRSAPQECGAGGQPTPDGRRLLTATLAEPGTLLVSDDRRTLHQVSPIRPLEGDGPARRDVLVITFASGRP
Sequences:
>Translated_151_residues MVGSAGRTDIDPVGAAAELVAATGAAVLPALSVTRSLGVGREEWTRFARDPLLHKVIRLLSRIAAALDEVGEWNVQVHPF RIRSAPQECGAGGQPTPDGRRLLTATLAEPGTLLVSDDRRTLHQVSPIRPLEGDGPARRDVLVITFASGRP >Mature_151_residues MVGSAGRTDIDPVGAAAELVAATGAAVLPALSVTRSLGVGREEWTRFARDPLLHKVIRLLSRIAAALDEVGEWNVQVHPF RIRSAPQECGAGGQPTPDGRRLLTATLAEPGTLLVSDDRRTLHQVSPIRPLEGDGPARRDVLVITFASGRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16027; Mature: 16027
Theoretical pI: Translated: 8.57; Mature: 8.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVGSAGRTDIDPVGAAAELVAATGAAVLPALSVTRSLGVGREEWTRFARDPLLHKVIRLL CCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHH SRIAAALDEVGEWNVQVHPFRIRSAPQECGAGGQPTPDGRRLLTATLAEPGTLLVSDDRR HHHHHHHHHHCCCCEEECEEECCCCHHHCCCCCCCCCCCCEEEEEECCCCCEEEEECCHH TLHQVSPIRPLEGDGPARRDVLVITFASGRP HHHHCCCCCCCCCCCCCCCCEEEEEECCCCC >Mature Secondary Structure MVGSAGRTDIDPVGAAAELVAATGAAVLPALSVTRSLGVGREEWTRFARDPLLHKVIRLL CCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHH SRIAAALDEVGEWNVQVHPFRIRSAPQECGAGGQPTPDGRRLLTATLAEPGTLLVSDDRR HHHHHHHHHHCCCCEEECEEECCCCHHHCCCCCCCCCCCCEEEEEECCCCCEEEEECCHH TLHQVSPIRPLEGDGPARRDVLVITFASGRP HHHHCCCCCCCCCCCCCCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA