| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409575
Identifier: 41409575
GI number: 41409575
Start: 3863995
End: 3865269
Strand: Direct
Name: 41409575
Synonym: MAP3477
Alternate gene names: NA
Gene position: 3863995-3865269 (Clockwise)
Preceding gene: 41409572
Following gene: 41409576
Centisome position: 80.0
GC content: 73.49
Gene sequence:
>1275_bases ATGGCGCAGACACTCGATACGGCGTTCCTCAAGGCCCACGATCCGGATCAGCACGCCAGCCTGGCGATCGGGGCGGTCGC CATCGTCGACGGCACCGTGCCCGACCCTGCGCAACTGGAACACCTTGTGGCAGAACGCATCCTGCCAATCGCGCGGTGCA CGCAGCTGCTGCGGGCGCACCCGCTGAACCGGGAGTGGGTGGACTGCCCGGACTTCGATCTGGCCCGGCACCTGCGCCGG GTGGCGATCGCGGGCACCGGCGACGAGGCCGAGCTGTCGCAGGTGATCGGCCAGGCGCTGCGCCGGCCGCTGCACCCGGG TCGCCCGCCGTGGGAATGCTGGGTGATCGAGGGCCTGCGCGGCAACCGGTGGGCGATGTTGATGAAGACCCATCACGGCC TGCTGGACGGCAACCCGGCCGCCCGCCTGATCACCCGGCTCTGCGACGACGCCGACGCCGACATGTTCGCCAATAACGCT GCGGCACAACCTGTTTCACCCTCGACCGGCTGGCTCGACGCGCTGAGCCGGGTGTCGTCGCTGACCGGTGGGCTGCTCGG GGCGCTCCGGCTCGCCGGGCGGGCCGAGGCGGTGGCGCCGGTGCGCCGCTACGCCACGGTGCGGGTGCCGATCGCCGACG TCGACCGGGTCTGCCGCAAATTCGGTGTCAGCGCCAACGACGTCGCGCTGGCCGCCGTCACCGAGGGATTCCGCACGGTG CTGCTCGACCGCGGCGAGCAACCGCGGGCCGACTCGCTGCGCACCCTGGTCCCGCTGCCGGTCCGCTCGGCGGTGCTCTC GCACCTGCCCGTCGAACACGACGACCCGGTGCGCCGGCTGCAGACCGTGCACGCCCGGTGCAACCCCGCCGCCGGGACGC AGCCGGCCGGCATCGTCGAATCGGCGATCGGACTGCTCCCGAACATGGTGCGCGGCAATCTGATCCAGCTGCTGTCCCGG CTGCCGCAGCGTGGCGGTGCTCAGCTACGGCGACGAACTGGTTTTCGGCATCACCGCCGGGCCGGGCGACGGGTTCGACG TCACGCGGCTGGCCGCCGCCGTCGAGCTGGGCATGGCGCGGCTGGCGGCCCTCGGCGACGATTCCGTGCTGCTGTTCGCC GACCGGCGGCGCCGCCGCGCGGCCCGCCCGCCGCTGGGCCGGGTGCCGCCCGCGCACCCGTCGGCGCCCGGGCACGCGCG TCACTGACCGGCTCGGGGCGCGACCGTGCCGCCGTGAGAAGGTTTTCCTCATGGGCGAATCGGGGCCGGTGGTGA
Upstream 100 bases:
>100_bases ACTCCTAAACAAGGTCTTAACGCTGCGGGGGTTACCGCGGGCGGGGCACTGGACGAATACTGGTACGGGTTCAAAAAAGC GGACACGGGCGGGACCGAGC
Downstream 100 bases:
>100_bases TCGACCCGCGCCGCCACGACGCGGTGCTGTTCGGGGTCGGCGACGCGCTGGGCTCGGCACTGGCGAGCCAACTGGGACAG ATCGGGGTGGGCACCGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Putative triacylglycerol synthase Rv3371/MT3481 [H]
Number of amino acids: Translated: 424; Mature: 423
Protein sequence:
>424_residues MAQTLDTAFLKAHDPDQHASLAIGAVAIVDGTVPDPAQLEHLVAERILPIARCTQLLRAHPLNREWVDCPDFDLARHLRR VAIAGTGDEAELSQVIGQALRRPLHPGRPPWECWVIEGLRGNRWAMLMKTHHGLLDGNPAARLITRLCDDADADMFANNA AAQPVSPSTGWLDALSRVSSLTGGLLGALRLAGRAEAVAPVRRYATVRVPIADVDRVCRKFGVSANDVALAAVTEGFRTV LLDRGEQPRADSLRTLVPLPVRSAVLSHLPVEHDDPVRRLQTVHARCNPAAGTQPAGIVESAIGLLPNMVRGNLIQLLSR LPQRGGAQLRRRTGFRHHRRAGRRVRRHAAGRRRRAGHGAAGGPRRRFRAAVRRPAAPPRGPPAAGPGAARAPVGARARA SLTGSGRDRAAVRRFSSWANRGRW
Sequences:
>Translated_424_residues MAQTLDTAFLKAHDPDQHASLAIGAVAIVDGTVPDPAQLEHLVAERILPIARCTQLLRAHPLNREWVDCPDFDLARHLRR VAIAGTGDEAELSQVIGQALRRPLHPGRPPWECWVIEGLRGNRWAMLMKTHHGLLDGNPAARLITRLCDDADADMFANNA AAQPVSPSTGWLDALSRVSSLTGGLLGALRLAGRAEAVAPVRRYATVRVPIADVDRVCRKFGVSANDVALAAVTEGFRTV LLDRGEQPRADSLRTLVPLPVRSAVLSHLPVEHDDPVRRLQTVHARCNPAAGTQPAGIVESAIGLLPNMVRGNLIQLLSR LPQRGGAQLRRRTGFRHHRRAGRRVRRHAAGRRRRAGHGAAGGPRRRFRAAVRRPAAPPRGPPAAGPGAARAPVGARARA SLTGSGRDRAAVRRFSSWANRGRW >Mature_423_residues AQTLDTAFLKAHDPDQHASLAIGAVAIVDGTVPDPAQLEHLVAERILPIARCTQLLRAHPLNREWVDCPDFDLARHLRRV AIAGTGDEAELSQVIGQALRRPLHPGRPPWECWVIEGLRGNRWAMLMKTHHGLLDGNPAARLITRLCDDADADMFANNAA AQPVSPSTGWLDALSRVSSLTGGLLGALRLAGRAEAVAPVRRYATVRVPIADVDRVCRKFGVSANDVALAAVTEGFRTVL LDRGEQPRADSLRTLVPLPVRSAVLSHLPVEHDDPVRRLQTVHARCNPAAGTQPAGIVESAIGLLPNMVRGNLIQLLSRL PQRGGAQLRRRTGFRHHRRAGRRVRRHAAGRRRRAGHGAAGGPRRRFRAAVRRPAAPPRGPPAAGPGAARAPVGARARAS LTGSGRDRAAVRRFSSWANRGRW
Specific function: Upon expression in E.coli functions weakly as a triacylglycerol synthase, making triacylglycerol (TG) from diolein and long-chain fatty acyl-CoA. Has no wax synthase activity to produce wax esters [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the long-chain O-acyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014292 - InterPro: IPR004255 [H]
Pfam domain/function: PF03007 UPF0089 [H]
EC number: =2.3.1.20 [H]
Molecular weight: Translated: 45897; Mature: 45766
Theoretical pI: Translated: 12.17; Mature: 12.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQTLDTAFLKAHDPDQHASLAIGAVAIVDGTVPDPAQLEHLVAERILPIARCTQLLRAH CCCCHHHHHHHCCCCCHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC PLNREWVDCPDFDLARHLRRVAIAGTGDEAELSQVIGQALRRPLHPGRPPWECWVIEGLR CCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCC GNRWAMLMKTHHGLLDGNPAARLITRLCDDADADMFANNAAAQPVSPSTGWLDALSRVSS CCCEEEEEHHHCCCCCCCHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHH LTGGLLGALRLAGRAEAVAPVRRYATVRVPIADVDRVCRKFGVSANDVALAAVTEGFRTV HHHHHHHHHHHHCCHHHHHHHHHHHEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH LLDRGEQPRADSLRTLVPLPVRSAVLSHLPVEHDDPVRRLQTVHARCNPAAGTQPAGIVE HHCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHH SAIGLLPNMVRGNLIQLLSRLPQRGGAQLRRRTGFRHHRRAGRRVRRHAAGRRRRAGHGA HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCC AGGPRRRFRAAVRRPAAPPRGPPAAGPGAARAPVGARARASLTGSGRDRAAVRRFSSWAN CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH RGRW CCCC >Mature Secondary Structure AQTLDTAFLKAHDPDQHASLAIGAVAIVDGTVPDPAQLEHLVAERILPIARCTQLLRAH CCCHHHHHHHCCCCCHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC PLNREWVDCPDFDLARHLRRVAIAGTGDEAELSQVIGQALRRPLHPGRPPWECWVIEGLR CCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCC GNRWAMLMKTHHGLLDGNPAARLITRLCDDADADMFANNAAAQPVSPSTGWLDALSRVSS CCCEEEEEHHHCCCCCCCHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHH LTGGLLGALRLAGRAEAVAPVRRYATVRVPIADVDRVCRKFGVSANDVALAAVTEGFRTV HHHHHHHHHHHHCCHHHHHHHHHHHEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH LLDRGEQPRADSLRTLVPLPVRSAVLSHLPVEHDDPVRRLQTVHARCNPAAGTQPAGIVE HHCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHH SAIGLLPNMVRGNLIQLLSRLPQRGGAQLRRRTGFRHHRRAGRRVRRHAAGRRRRAGHGA HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCC AGGPRRRFRAAVRRPAAPPRGPPAAGPGAARAPVGARARASLTGSGRDRAAVRRFSSWAN CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH RGRW CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]