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The map label for this gene is ynjA [H]

Identifier: 41409543

GI number: 41409543

Start: 3824375

End: 3825133

Strand: Direct

Name: ynjA [H]

Synonym: MAP3445

Alternate gene names: 41409543

Gene position: 3824375-3825133 (Clockwise)

Preceding gene: 41409542

Following gene: 41409545

Centisome position: 79.18

GC content: 69.7

Gene sequence:

>759_bases
TTGCCCGCGAGCGTCTCCTTCTGCCCGCGAGCGTCACGCCAGCGTGGCAGTCGACGCCGAGCGTCACGCCAGCGTGACGC
CCGCGCCGCGGCCAGAAGGTTCCAGGCGCCGTCACACATCGCGGGCCTGCCTCGTCTGATCGGTATGACACAGAAAACTC
GCATCGAACCCCTGCCCCCTCAGCGCGCCGGGCTGCTGACCCGGGCCATGTACCGGATCGCCAAGCGGCGCTACGGCCAG
GTTCCCGAACCGTTCGCCGTCGCCGCGCATCACCGCAGGCTGATGGTCGCCAGCGCCGTGCATGAAACCCTGGTCGACCG
GGCGTCCAAGACGCTGCCGGCCAGCGTGCGCGAACTCGCGGTGTACTGGACCGCCCGCCAGATCGGCTGCTCGTGGTGCG
TCGACTTCGGGTCCATGCTGCAGCGCCTCGACGGCCTGGACATCCAGCGGCTCACCGAGATCGACGACTACGCCACCTCA
CCGGCGTTCACCGACGACGAGCGCGCCGCCATCGCGTACGCCGCCGCGATCACCACCGACCCGCACACCGTCACCGACGA
GCAGGTCGACGATCTGCGCGCCCGGTTCGGCGATGCGGGCACCTTCGAGCTGACCTATCAGATCGGGCTCGAGAACATGC
GGGCGCGGGTGAACGCGGCGCTCGGCATCACCGAGCAGGGCTTCAATTCCGGTGACGCGTGCCGCATCCCGTGGGCCACG
GGCGACACGGAAACTAGCGACCCAGCGGCGAACCGGTGA

Upstream 100 bases:

>100_bases
TCCAAGAGGTCAAGCGCGCCATCATGTTCTCCCGCTGATCGCTCGAGCTTTTGCCCCCTTCTGCCCGCGAGCGTCCCCTT
CTGCCCGCGAGCGTCACGTT

Downstream 100 bases:

>100_bases
ACTTGTCCGGATTGGCGATATCCCAGAGCGCGCAGACCTTTCTCTCGCGCACCGTCATCGCCATGATCCGCGGGCACATC
TCCCGATAGCCGTCACCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 251

Protein sequence:

>252_residues
MPASVSFCPRASRQRGSRRRASRQRDARAAARRFQAPSHIAGLPRLIGMTQKTRIEPLPPQRAGLLTRAMYRIAKRRYGQ
VPEPFAVAAHHRRLMVASAVHETLVDRASKTLPASVRELAVYWTARQIGCSWCVDFGSMLQRLDGLDIQRLTEIDDYATS
PAFTDDERAAIAYAAAITTDPHTVTDEQVDDLRARFGDAGTFELTYQIGLENMRARVNAALGITEQGFNSGDACRIPWAT
GDTETSDPAANR

Sequences:

>Translated_252_residues
MPASVSFCPRASRQRGSRRRASRQRDARAAARRFQAPSHIAGLPRLIGMTQKTRIEPLPPQRAGLLTRAMYRIAKRRYGQ
VPEPFAVAAHHRRLMVASAVHETLVDRASKTLPASVRELAVYWTARQIGCSWCVDFGSMLQRLDGLDIQRLTEIDDYATS
PAFTDDERAAIAYAAAITTDPHTVTDEQVDDLRARFGDAGTFELTYQIGLENMRARVNAALGITEQGFNSGDACRIPWAT
GDTETSDPAANR
>Mature_251_residues
PASVSFCPRASRQRGSRRRASRQRDARAAARRFQAPSHIAGLPRLIGMTQKTRIEPLPPQRAGLLTRAMYRIAKRRYGQV
PEPFAVAAHHRRLMVASAVHETLVDRASKTLPASVRELAVYWTARQIGCSWCVDFGSMLQRLDGLDIQRLTEIDDYATSP
AFTDDERAAIAYAAAITTDPHTVTDEQVDDLRARFGDAGTFELTYQIGLENMRARVNAALGITEQGFNSGDACRIPWATG
DTETSDPAANR

Specific function: Unknown

COG id: COG2128

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To M.tuberculosis Rv2313c [H]

Homologues:

Organism=Escherichia coli, GI1788050, Length=183, Percent_Identity=33.3333333333333, Blast_Score=84, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003779 [H]

Pfam domain/function: PF02627 CMD [H]

EC number: NA

Molecular weight: Translated: 27900; Mature: 27769

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPASVSFCPRASRQRGSRRRASRQRDARAAARRFQAPSHIAGLPRLIGMTQKTRIEPLPP
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHCCCCCCCC
QRAGLLTRAMYRIAKRRYGQVPEPFAVAAHHRRLMVASAVHETLVDRASKTLPASVRELA
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
VYWTARQIGCSWCVDFGSMLQRLDGLDIQRLTEIDDYATSPAFTDDERAAIAYAAAITTD
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHEEEECC
PHTVTDEQVDDLRARFGDAGTFELTYQIGLENMRARVNAALGITEQGFNSGDACRIPWAT
CCCCCHHHHHHHHHHHCCCCEEEEEEEECHHHHHHHHHHHHCCCCCCCCCCCEEECCCCC
GDTETSDPAANR
CCCCCCCCCCCC
>Mature Secondary Structure 
PASVSFCPRASRQRGSRRRASRQRDARAAARRFQAPSHIAGLPRLIGMTQKTRIEPLPP
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHCCCCCCCC
QRAGLLTRAMYRIAKRRYGQVPEPFAVAAHHRRLMVASAVHETLVDRASKTLPASVRELA
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
VYWTARQIGCSWCVDFGSMLQRLDGLDIQRLTEIDDYATSPAFTDDERAAIAYAAAITTD
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHEEEECC
PHTVTDEQVDDLRARFGDAGTFELTYQIGLENMRARVNAALGITEQGFNSGDACRIPWAT
CCCCCHHHHHHHHHHHCCCCEEEEEEEECHHHHHHHHHHHHCCCCCCCCCCCEEECCCCC
GDTETSDPAANR
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]