| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is cut3 [H]
Identifier: 41409526
GI number: 41409526
Start: 3807617
End: 3808324
Strand: Reverse
Name: cut3 [H]
Synonym: MAP3428c
Alternate gene names: 41409526
Gene position: 3808324-3807617 (Counterclockwise)
Preceding gene: 41409529
Following gene: 41409525
Centisome position: 78.85
GC content: 72.6
Gene sequence:
>708_bases GTGTCGGGGGGGTGTGCCAGGATCTGGCGTATGAATCTGCGTGGGTGGCCGGTGGTTGGCCCGGCCATTGGAACTGTCGT CGCGGTCGCCTTGTCGGTGGTCGCCATCACCTGCGGCCCGGCGCCGCGGGCGGCGGCCGACGGATGTCCGGACGTGCAAC TGATTTTCGCCCGCGGCACCGCCGAGCCCCCGGGCTTGGGAGCCGTGGGCGATGCGCTGTTCGCCGCGCTGCAACCCGCG CTGGGCAACCGCAACGTCGACGCCTACGCGGTGAACTATCCGGCCAGCTACAACTTCCTGACCACCGCCGACGGCGCCAA CGACGCCCGCGACCACATCGCCGAGATGGTCGACCGGTGCCCGTCCACCCGGCTGGTGCTCGGCGGGTTCTCGCAGGGCG CGGCCGCGGTCTCGATGCTCGCCGGGGTACCGCCGGTCGGGCAGCGGATCGGCAACTTCGGATCGGCACCCCCACTGGAT CCCGGCCTGGCGAGCAAGATCGCGGCGGTGGCGGTGTTCGGCAACCCCGGCAACCGCTTCAACACGCCCCTGTCGACCAC CGGGGCGTTCGCCGGTCGCGCCATCGACCTGTGCAGCGACGGCGACCCGGTGTGCGTCGTCGGCGGGCGGGACCGGGACG CGCACCACGTCTACGAGGACCCGCCCTACCCGGCCCAGGCGGCGGGGTTCATCGCCGGGCGGGTATAG
Upstream 100 bases:
>100_bases ACCGCGGCCGCCTGGCGCGCGAGCTCGCCTGGGTTGGACGGGGTTTCGGCCACAGCGATCGAGCCTAGCCCGGCGACGGC GAACGCCGGCCCGGGAGCGG
Downstream 100 bases:
>100_bases CCAGGGGCGTTGGGCCCCGGTCGGATACTGCGACATACTGCGAGAGTGCCCCCCGTCGGATCAGACAGCCCGCTGGACAG CGTCGAGGATGTCGTGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 235; Mature: 234
Protein sequence:
>235_residues MSGGCARIWRMNLRGWPVVGPAIGTVVAVALSVVAITCGPAPRAAADGCPDVQLIFARGTAEPPGLGAVGDALFAALQPA LGNRNVDAYAVNYPASYNFLTTADGANDARDHIAEMVDRCPSTRLVLGGFSQGAAAVSMLAGVPPVGQRIGNFGSAPPLD PGLASKIAAVAVFGNPGNRFNTPLSTTGAFAGRAIDLCSDGDPVCVVGGRDRDAHHVYEDPPYPAQAAGFIAGRV
Sequences:
>Translated_235_residues MSGGCARIWRMNLRGWPVVGPAIGTVVAVALSVVAITCGPAPRAAADGCPDVQLIFARGTAEPPGLGAVGDALFAALQPA LGNRNVDAYAVNYPASYNFLTTADGANDARDHIAEMVDRCPSTRLVLGGFSQGAAAVSMLAGVPPVGQRIGNFGSAPPLD PGLASKIAAVAVFGNPGNRFNTPLSTTGAFAGRAIDLCSDGDPVCVVGGRDRDAHHVYEDPPYPAQAAGFIAGRV >Mature_234_residues SGGCARIWRMNLRGWPVVGPAIGTVVAVALSVVAITCGPAPRAAADGCPDVQLIFARGTAEPPGLGAVGDALFAALQPAL GNRNVDAYAVNYPASYNFLTTADGANDARDHIAEMVDRCPSTRLVLGGFSQGAAAVSMLAGVPPVGQRIGNFGSAPPLDP GLASKIAAVAVFGNPGNRFNTPLSTTGAFAGRAIDLCSDGDPVCVVGGRDRDAHHVYEDPPYPAQAAGFIAGRV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Secreted (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cutinase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000675 - InterPro: IPR011150 [H]
Pfam domain/function: PF01083 Cutinase [H]
EC number: =3.1.1.74 [H]
Molecular weight: Translated: 23823; Mature: 23692
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGGCARIWRMNLRGWPVVGPAIGTVVAVALSVVAITCGPAPRAAADGCPDVQLIFARGT CCCCCEEEEEECCCCCCEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCC AEPPGLGAVGDALFAALQPALGNRNVDAYAVNYPASYNFLTTADGANDARDHIAEMVDRC CCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEECCCCCHHHHHHHHHHHHC PSTRLVLGGFSQGAAAVSMLAGVPPVGQRIGNFGSAPPLDPGLASKIAAVAVFGNPGNRF CCCEEEEECCCCHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCHHHCEEEEEEECCCCCCC NTPLSTTGAFAGRAIDLCSDGDPVCVVGGRDRDAHHVYEDPPYPAQAAGFIAGRV CCCCCCCCCCCCCEEEECCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCC >Mature Secondary Structure SGGCARIWRMNLRGWPVVGPAIGTVVAVALSVVAITCGPAPRAAADGCPDVQLIFARGT CCCCEEEEEECCCCCCEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCC AEPPGLGAVGDALFAALQPALGNRNVDAYAVNYPASYNFLTTADGANDARDHIAEMVDRC CCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEECCCCCHHHHHHHHHHHHC PSTRLVLGGFSQGAAAVSMLAGVPPVGQRIGNFGSAPPLDPGLASKIAAVAVFGNPGNRF CCCEEEEECCCCHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCHHHCEEEEEEECCCCCCC NTPLSTTGAFAGRAIDLCSDGDPVCVVGGRDRDAHHVYEDPPYPAQAAGFIAGRV CCCCCCCCCCCCCEEEECCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]