| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409493
Identifier: 41409493
GI number: 41409493
Start: 3771478
End: 3772143
Strand: Direct
Name: 41409493
Synonym: MAP3395
Alternate gene names: NA
Gene position: 3771478-3772143 (Clockwise)
Preceding gene: 41409484
Following gene: 41409497
Centisome position: 78.09
GC content: 65.02
Gene sequence:
>666_bases GTGTCCTTCGCCGAAGCCACGATCGCGCGTTTGCCCAGGCTTTTGCAGCCCTATTTGCTACGCCACCACGAGCTGATCAA ATTCGCCATCGTCGGCGGCACCACATTCGTCATCGACTCGGCGATTTTCTACACGCTGAAGCTCACCATTCTGGAGCCCA AACCGGTGACCGCCAAGGTGATCGCGGGCATCGTGGCGGTCATCGCGTCCTACGTGCTGAACCGGGAATGGAGCTTCCGC AATCGCGGCGGCCGCGAGCGTCACCACGAGGCGCTGCTGTTCTTCGCGTTCAGCGGGGTCGGGGTGCTGCTGTCCATGGC GCCGCTGTGGTTCTCCAGCTACGTGTTGCAGCTGCGCCAGCCCACGGTGTCGCTGACGGTGGAGAACGTGGCCGACTTCA TCTCGGCCTACATCATCGGCAACCTGCTGCAGATGGCGTTCCGGTTCTGGGCGTTCCGGCGCTGGGTATTCCCCGACCAG TTCGCCCGCGACCCCGACAAGGCGCTGGAGTCCGCCCTCACCGCCGGCGGTATCGCCGAGATCTTCGAGGACGCGTTCGA GGACGACGGCGGCAACGTCACGCTGTTGCGGGCCTGGCGCAACCGGGCCGGCCGGCTGACTCAGCTGGGCGATTCCTCCG AACCCAGGGTGTCGAAGACCTCGTGA
Upstream 100 bases:
>100_bases GGTGCTAAATGCCGGCGGCCGCCGTGTTGAGCGGGGCTGACACAGAATTGTTATGTACGATTTTGCGTCGATTTTGTGTC CGTCCGTAGACTGACGTGTT
Downstream 100 bases:
>100_bases TACAGCAGCGCGTGCACCTCGCGCAGCCGCGGAATGTCGTGGAACTCCAACGGATCCTGTGACGCCGACTCGATGATCAG CGTGCCGGTGCGCAGCATCC
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein; GtrA-Like Protein; Gtra-Like Protein; Conserved Membrane Protein; GtrA-Like Family Protein; Monosaccharide Translocase
Number of amino acids: Translated: 221; Mature: 220
Protein sequence:
>221_residues MSFAEATIARLPRLLQPYLLRHHELIKFAIVGGTTFVIDSAIFYTLKLTILEPKPVTAKVIAGIVAVIASYVLNREWSFR NRGGRERHHEALLFFAFSGVGVLLSMAPLWFSSYVLQLRQPTVSLTVENVADFISAYIIGNLLQMAFRFWAFRRWVFPDQ FARDPDKALESALTAGGIAEIFEDAFEDDGGNVTLLRAWRNRAGRLTQLGDSSEPRVSKTS
Sequences:
>Translated_221_residues MSFAEATIARLPRLLQPYLLRHHELIKFAIVGGTTFVIDSAIFYTLKLTILEPKPVTAKVIAGIVAVIASYVLNREWSFR NRGGRERHHEALLFFAFSGVGVLLSMAPLWFSSYVLQLRQPTVSLTVENVADFISAYIIGNLLQMAFRFWAFRRWVFPDQ FARDPDKALESALTAGGIAEIFEDAFEDDGGNVTLLRAWRNRAGRLTQLGDSSEPRVSKTS >Mature_220_residues SFAEATIARLPRLLQPYLLRHHELIKFAIVGGTTFVIDSAIFYTLKLTILEPKPVTAKVIAGIVAVIASYVLNREWSFRN RGGRERHHEALLFFAFSGVGVLLSMAPLWFSSYVLQLRQPTVSLTVENVADFISAYIIGNLLQMAFRFWAFRRWVFPDQF ARDPDKALESALTAGGIAEIFEDAFEDDGGNVTLLRAWRNRAGRLTQLGDSSEPRVSKTS
Specific function: Unknown
COG id: COG2246
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24839; Mature: 24708
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFAEATIARLPRLLQPYLLRHHELIKFAIVGGTTFVIDSAIFYTLKLTILEPKPVTAKV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHEEEEEECCCCCHHHH IAGIVAVIASYVLNREWSFRNRGGRERHHEALLFFAFSGVGVLLSMAPLWFSSYVLQLRQ HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PTVSLTVENVADFISAYIIGNLLQMAFRFWAFRRWVFPDQFARDPDKALESALTAGGIAE CHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHCCCHHH IFEDAFEDDGGNVTLLRAWRNRAGRLTQLGDSSEPRVSKTS HHHHHHHCCCCCEEEEHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SFAEATIARLPRLLQPYLLRHHELIKFAIVGGTTFVIDSAIFYTLKLTILEPKPVTAKV CHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHEEEEEECCCCCHHHH IAGIVAVIASYVLNREWSFRNRGGRERHHEALLFFAFSGVGVLLSMAPLWFSSYVLQLRQ HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PTVSLTVENVADFISAYIIGNLLQMAFRFWAFRRWVFPDQFARDPDKALESALTAGGIAE CHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHCCCHHH IFEDAFEDDGGNVTLLRAWRNRAGRLTQLGDSSEPRVSKTS HHHHHHHCCCCCEEEEHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA