| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409436
Identifier: 41409436
GI number: 41409436
Start: 3707316
End: 3707840
Strand: Direct
Name: 41409436
Synonym: MAP3338
Alternate gene names: NA
Gene position: 3707316-3707840 (Clockwise)
Preceding gene: 41409435
Following gene: 41409438
Centisome position: 76.76
GC content: 66.29
Gene sequence:
>525_bases GTGACCGAGACCCGGTACATCCCCTTTCACGGCGTGCGGGTGCACTACGACAGCGCCAAGAGCTACGACCAACTGCGTGC CGCGCTGCTCGCCGACATCGGCGAGCAGCCGGTGCCGCTCAACGACATCGCCACCGACGCCGGCGACTGGGAGTCGTACC GCAAACGCGTCGAATCCCACGTCGGCCCAAGCGGATTCATGCTGATAGTCCTCATCGATCATGGCGCCTGGATCACCAAG GCCGGCATCGAGCGCAGGGCGCTGCGCGTGATCCTCGGCAACCCGCTGATCGCGATCACCATGCTGCGCCACGACGTGAC GGCCGGGTTGTTCGCCCCGGTCGAACTGCTGCTCGCCGAGGAGGGTTCCGGCAGCAGCCTGACCTACGTCAAGCCGTCGT CACTGATGGTTCCGGAGAGGGACCCGGCGCCCAATCCGGAATTGCTCGCCGCCGCGGAAGCGCTGGACGAGAGATTGGCC GCGCTGGCCGTCAAGGTGACCGGCTCGGTATCAGAGTTCGCTTGA
Upstream 100 bases:
>100_bases AACGCGCTGGAGCAACGCGGCGGAAGGTATGGCCTGCAGACGATGTGCGAGGGCGGCGGCATGGCCAACGCCACCATCAT CGAGCGGTTGAGTTAGGCCC
Downstream 100 bases:
>100_bases GTACCAGTGGCATACGTCATCCCCCTGGCTGTACCGCTGGAACCAGCGATCGGCGAACACCGGAAGTGGCTCCTTGGCGG GATCGTGCAGTGGCGTCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 174; Mature: 173
Protein sequence:
>174_residues MTETRYIPFHGVRVHYDSAKSYDQLRAALLADIGEQPVPLNDIATDAGDWESYRKRVESHVGPSGFMLIVLIDHGAWITK AGIERRALRVILGNPLIAITMLRHDVTAGLFAPVELLLAEEGSGSSLTYVKPSSLMVPERDPAPNPELLAAAEALDERLA ALAVKVTGSVSEFA
Sequences:
>Translated_174_residues MTETRYIPFHGVRVHYDSAKSYDQLRAALLADIGEQPVPLNDIATDAGDWESYRKRVESHVGPSGFMLIVLIDHGAWITK AGIERRALRVILGNPLIAITMLRHDVTAGLFAPVELLLAEEGSGSSLTYVKPSSLMVPERDPAPNPELLAAAEALDERLA ALAVKVTGSVSEFA >Mature_173_residues TETRYIPFHGVRVHYDSAKSYDQLRAALLADIGEQPVPLNDIATDAGDWESYRKRVESHVGPSGFMLIVLIDHGAWITKA GIERRALRVILGNPLIAITMLRHDVTAGLFAPVELLLAEEGSGSSLTYVKPSSLMVPERDPAPNPELLAAAEALDERLAA LAVKVTGSVSEFA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18859; Mature: 18728
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTETRYIPFHGVRVHYDSAKSYDQLRAALLADIGEQPVPLNDIATDAGDWESYRKRVESH CCCCEECCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCHHHCCCCCCHHHHHHHHHHC VGPSGFMLIVLIDHGAWITKAGIERRALRVILGNPLIAITMLRHDVTAGLFAPVELLLAE CCCCCEEEEEEEECCCEEECCCHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHEEEEEEC EGSGSSLTYVKPSSLMVPERDPAPNPELLAAAEALDERLAALAVKVTGSVSEFA CCCCCEEEEECCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHEEECCCHHHCC >Mature Secondary Structure TETRYIPFHGVRVHYDSAKSYDQLRAALLADIGEQPVPLNDIATDAGDWESYRKRVESH CCCEECCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCHHHCCCCCCHHHHHHHHHHC VGPSGFMLIVLIDHGAWITKAGIERRALRVILGNPLIAITMLRHDVTAGLFAPVELLLAE CCCCCEEEEEEEECCCEEECCCHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHEEEEEEC EGSGSSLTYVKPSSLMVPERDPAPNPELLAAAEALDERLAALAVKVTGSVSEFA CCCCCEEEEECCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHEEECCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA