| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is aroA
Identifier: 41409432
GI number: 41409432
Start: 3703282
End: 3704589
Strand: Direct
Name: aroA
Synonym: MAP3334
Alternate gene names: 41409432
Gene position: 3703282-3704589 (Clockwise)
Preceding gene: 41409430
Following gene: 41409433
Centisome position: 76.68
GC content: 73.93
Gene sequence:
>1308_bases GTGACTACGTGGACGGCCCCCCTCGCACCGCAACCGGTGCACGCGACCGTGACCGTTCCGGGTTCGAAGTCGCAGACCAA CCGGGCCCTGGTGCTGGCGGCGCTGGCCGCCGCCCAGGGCCGGGGCACCCCGACCCTCAGCGGGGCGCTGCGCAGCCGCG ACACCGACCTGATGATCGGCGCGCTGCGCACCCTGGGCCTGCGCGTCGACGGGACAGGCCCGGAACTGACCGTCAGCGGC CACATCGCGCCCGGACCACACGCCCGAGTCGACTGCGGGCTGGCCGGAACGGTGCTGCGGTTCGTTCCGCCCCTGGCGGC GCTGGCCGACGCGGTGGTGGAGTTCGACGGCGACGAGCAGGCCCGGGCCCGGCCGATCGCGCCGCTGCTGGACGCGCTGC GCGGGCTCGGCGTGCGGATCGAAGGCACCGCCCTGCCGTTCCGGGTGCACGGCAGCGGCGCGCTCGCCGGGGGCACGGTG GCCATCGACGCGTCGGCCTCCTCGCAGTTCGTCTCCGGGCTGTTGCTCTGCGCGGCCTCCTTCACCGAGGGCCTGACCGT GCAACACACCGGCGCGGCGCTGCCGTCGGCCCCGCACATCGCGATGACGGTGGCGATGCTGCGCCAGGCCGGCGTCGACG TCGACGACTCGGTCCCCAACCGCTGGCAGGTACGGCCGGGGCCGGTCGCGGCCCGGCACTGGGAGGTGGAACCGGACCTG ACCAACGCCGTTCCGTTCCTGGCGGCGGCCGTGGTCAGCGGCGGCACCGTGCGCATCACCGGCTGGCCGGCCGACAGCGT GCAACCCGCCGACAATATCCTGAGCGTGTTGGGCAAGCTGAATGCCGTTGTCTCCCAGACTGATTCGTCTCTGGAGGTGC GCGGCTCCGGGAGCTATGACGGTTTCGACGTCGACCTGCGCGCGGTCGGCGAGCTGACACCGTCGGTGGCCGCCCTGGCG GCGCTGGCCACGCCGGGATCGGTGTCGCGGCTGTCCGGCATCGCGCACCTGCGCGGCCACGAGACCGACCGGCTGGCCGC GCTGAGCGCCGAGATCAACCGCCTCGGCGGCGACTGCACCGAAACACCCGACGGCCTGGTGATCACCGCGACGCCGCTGC GCCCCGGGGTGTGGCACGCCTACGCCGACCACCGGATGGCGATGGCCGGTGCGATCGTCGGGCTGCGGGTGGCCGGGGTC CGAGTCGACGACATCGGCGCCACCAGCAAGACGCTGCCGGACTTTCCGCGGCTGTGGGCCCGCATGCTGGACGCCAGCCT GCCGGACGGGGAAGAGCACGGCATGTGA
Upstream 100 bases:
>100_bases GCACATGACTCCCATGGTGGCAGAGCCACCGGGTGCAGGTCCGTGGCAGAGCCACGCAGTGCTATTGGGCCCGAAAACGG TGACAGGCGATGATGGACCG
Downstream 100 bases:
>100_bases GACCCGGCGACTACGACGAGTCCGACGTCAAGATCCGCTCCGGCCGCGGTTCGCGGCCGCGCACCAAGACCCGTCCCGAG CACGCCGACGCGCGGGCCGC
Product: 3-phosphoshikimate 1-carboxyvinyltransferase
Products: NA
Alternate protein names: 5-enolpyruvylshikimate-3-phosphate synthase; EPSP synthase; EPSPS
Number of amino acids: Translated: 435; Mature: 434
Protein sequence:
>435_residues MTTWTAPLAPQPVHATVTVPGSKSQTNRALVLAALAAAQGRGTPTLSGALRSRDTDLMIGALRTLGLRVDGTGPELTVSG HIAPGPHARVDCGLAGTVLRFVPPLAALADAVVEFDGDEQARARPIAPLLDALRGLGVRIEGTALPFRVHGSGALAGGTV AIDASASSQFVSGLLLCAASFTEGLTVQHTGAALPSAPHIAMTVAMLRQAGVDVDDSVPNRWQVRPGPVAARHWEVEPDL TNAVPFLAAAVVSGGTVRITGWPADSVQPADNILSVLGKLNAVVSQTDSSLEVRGSGSYDGFDVDLRAVGELTPSVAALA ALATPGSVSRLSGIAHLRGHETDRLAALSAEINRLGGDCTETPDGLVITATPLRPGVWHAYADHRMAMAGAIVGLRVAGV RVDDIGATSKTLPDFPRLWARMLDASLPDGEEHGM
Sequences:
>Translated_435_residues MTTWTAPLAPQPVHATVTVPGSKSQTNRALVLAALAAAQGRGTPTLSGALRSRDTDLMIGALRTLGLRVDGTGPELTVSG HIAPGPHARVDCGLAGTVLRFVPPLAALADAVVEFDGDEQARARPIAPLLDALRGLGVRIEGTALPFRVHGSGALAGGTV AIDASASSQFVSGLLLCAASFTEGLTVQHTGAALPSAPHIAMTVAMLRQAGVDVDDSVPNRWQVRPGPVAARHWEVEPDL TNAVPFLAAAVVSGGTVRITGWPADSVQPADNILSVLGKLNAVVSQTDSSLEVRGSGSYDGFDVDLRAVGELTPSVAALA ALATPGSVSRLSGIAHLRGHETDRLAALSAEINRLGGDCTETPDGLVITATPLRPGVWHAYADHRMAMAGAIVGLRVAGV RVDDIGATSKTLPDFPRLWARMLDASLPDGEEHGM >Mature_434_residues TTWTAPLAPQPVHATVTVPGSKSQTNRALVLAALAAAQGRGTPTLSGALRSRDTDLMIGALRTLGLRVDGTGPELTVSGH IAPGPHARVDCGLAGTVLRFVPPLAALADAVVEFDGDEQARARPIAPLLDALRGLGVRIEGTALPFRVHGSGALAGGTVA IDASASSQFVSGLLLCAASFTEGLTVQHTGAALPSAPHIAMTVAMLRQAGVDVDDSVPNRWQVRPGPVAARHWEVEPDLT NAVPFLAAAVVSGGTVRITGWPADSVQPADNILSVLGKLNAVVSQTDSSLEVRGSGSYDGFDVDLRAVGELTPSVAALAA LATPGSVSRLSGIAHLRGHETDRLAALSAEINRLGGDCTETPDGLVITATPLRPGVWHAYADHRMAMAGAIVGLRVAGVR VDDIGATSKTLPDFPRLWARMLDASLPDGEEHGM
Specific function: Aromatic amino acids biosynthesis; shikimate pathway; sixth step. [C]
COG id: COG0128
COG function: function code E; 5-enolpyruvylshikimate-3-phosphate synthase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the EPSP synthase family
Homologues:
Organism=Escherichia coli, GI1787137, Length=441, Percent_Identity=33.3333333333333, Blast_Score=159, Evalue=4e-40, Organism=Saccharomyces cerevisiae, GI6320332, Length=471, Percent_Identity=30.3609341825902, Blast_Score=150, Evalue=5e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): AROA_MYCPA (Q73UN2)
Other databases:
- EMBL: AE016958 - RefSeq: NP_962268.1 - HSSP: P22487 - ProteinModelPortal: Q73UN2 - SMR: Q73UN2 - EnsemblBacteria: EBMYCT00000038143 - GeneID: 2718142 - GenomeReviews: AE016958_GR - KEGG: mpa:MAP3334 - NMPDR: fig|262316.1.peg.3334 - GeneTree: EBGT00050000016231 - HOGENOM: HBG646626 - OMA: HRMATAG - ProtClustDB: PRK02427 - GO: GO:0005737 - HAMAP: MF_00210 - InterPro: IPR001986 - InterPro: IPR006264 - InterPro: IPR023193 - InterPro: IPR013792 - Gene3D: G3DSA:3.65.10.10 - PIRSF: PIRSF000505 - TIGRFAMs: TIGR01356
Pfam domain/function: PF00275 EPSP_synthase; SSF55205 RNA3'_cycl/enolpyr_transf_A/B
EC number: =2.5.1.19
Molecular weight: Translated: 44721; Mature: 44590
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: PS00104 EPSP_SYNTHASE_1; PS00885 EPSP_SYNTHASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTWTAPLAPQPVHATVTVPGSKSQTNRALVLAALAAAQGRGTPTLSGALRSRDTDLMIG CCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHCCCCHHHHH ALRTLGLRVDGTGPELTVSGHIAPGPHARVDCGLAGTVLRFVPPLAALADAVVEFDGDEQ HHHHHCEEECCCCCEEEEECCCCCCCCCEEECCHHHHHHHHHCCHHHHHHHHHCCCCCCH ARARPIAPLLDALRGLGVRIEGTALPFRVHGSGALAGGTVAIDASASSQFVSGLLLCAAS HCCCCCHHHHHHHHCCCEEEECCEEEEEECCCCCCCCCEEEEECCCHHHHHHHHHHHHHH FTEGLTVQHTGAALPSAPHIAMTVAMLRQAGVDVDDSVPNRWQVRPGPVAARHWEVEPDL HHCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCEEEEECCCCH TNAVPFLAAAVVSGGTVRITGWPADSVQPADNILSVLGKLNAVVSQTDSSLEVRGSGSYD HHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCC GFDVDLRAVGELTPSVAALAALATPGSVSRLSGIAHLRGHETDRLAALSAEINRLGGDCT CEEEEHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCC ETPDGLVITATPLRPGVWHAYADHRMAMAGAIVGLRVAGVRVDDIGATSKTLPDFPRLWA CCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHEEEEEEEEEEECCCCCCCCCCHHHHHHH RMLDASLPDGEEHGM HHHHCCCCCCHHCCC >Mature Secondary Structure TTWTAPLAPQPVHATVTVPGSKSQTNRALVLAALAAAQGRGTPTLSGALRSRDTDLMIG CCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHCCCCHHHHH ALRTLGLRVDGTGPELTVSGHIAPGPHARVDCGLAGTVLRFVPPLAALADAVVEFDGDEQ HHHHHCEEECCCCCEEEEECCCCCCCCCEEECCHHHHHHHHHCCHHHHHHHHHCCCCCCH ARARPIAPLLDALRGLGVRIEGTALPFRVHGSGALAGGTVAIDASASSQFVSGLLLCAAS HCCCCCHHHHHHHHCCCEEEECCEEEEEECCCCCCCCCEEEEECCCHHHHHHHHHHHHHH FTEGLTVQHTGAALPSAPHIAMTVAMLRQAGVDVDDSVPNRWQVRPGPVAARHWEVEPDL HHCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCEEEEECCCCH TNAVPFLAAAVVSGGTVRITGWPADSVQPADNILSVLGKLNAVVSQTDSSLEVRGSGSYD HHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCC GFDVDLRAVGELTPSVAALAALATPGSVSRLSGIAHLRGHETDRLAALSAEINRLGGDCT CEEEEHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCC ETPDGLVITATPLRPGVWHAYADHRMAMAGAIVGLRVAGVRVDDIGATSKTLPDFPRLWA CCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHEEEEEEEEEEECCCCCCCCCCHHHHHHH RMLDASLPDGEEHGM HHHHCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA