Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41409430

Identifier: 41409430

GI number: 41409430

Start: 3701022

End: 3702410

Strand: Direct

Name: 41409430

Synonym: MAP3332

Alternate gene names: NA

Gene position: 3701022-3702410 (Clockwise)

Preceding gene: 41409429

Following gene: 41409432

Centisome position: 76.63

GC content: 69.11

Gene sequence:

>1389_bases
ATGAGTAGCGATCGGGAGGCGGTGTCGGCGGCGTTCGACGCCATCGATGCCGCCTTGGACGATCTGCTCGACTGCGACTA
CGTCGCGTTGGCCACCCGCGAGAAGCTGGCGTTGCTGAACCGCTGCGAGAAACTGCGCCGGCGGCTGCCCGCGGTCGAGC
ATCCGCTGATCAACGCGCTGGCCCGCGACGCCACCCCGGCGGAGTTGGGGGGCCGGCTTTCGCATGCGATCGCCGAGGCC
ACGCTGATCAGCCGCGCCGAGGCCGCCCGGCGGGTGCACACCGCCGCTGACCTGGGCCCCCGCGTCGGGCTGACCGGCGA
GCCGTTGCCACCGTTGCTGGCGGCCACCGCCGCCGCACAACGAGAGGGGTCGTTGGGTCTCGAGCAGGTGGCGGTGATCC
GTAAGTTCTGCCACCAGTTGCCGGGCTGGATCGATCAGGCGACGCGGGAGCGCGCCGAAGCCGACCTGGCCAGGGAAGCC
ACCCGGTATCGGCCCGAACAGCTCGCCGCGTTGGCGGGCACGCTGGCCGATTGCCTCAACCCCGACGGCCTCTACCGCGA
CGAAGACCGCGCCCGCCGCCGCAGCCTCACCCTCGGCAACCAACACGCCGACGGCATGTCCGAACTCCGCGGACTACTGA
CCCCCGAACTGCGCGCCACCCTCGAGGCGGTGCTGGCCAAACTCGCCGCCCCCGGCATGTGCAACCCACTCGATGAAAAC
CCGTGCGTGGAGGGCACTCCGAGTCAACACGCCATCGACGGTGATGCCCGCTCGGCGGCCCAGCGCAACCACGATGGGCT
GCTGGCCGGCCTGCGCGCCCTGCTGGCCTCAGGAAACCTCGGCCAACACAACGGGCTCCCGGCCTCCATCATCGTCACCA
CCACCCTGGCCGACCTCGAAACCGCCGCCGGACGGGGTCTGACCGGCGGGGGCACCCTGCTGCCCATGTCCGATGTGATC
CGGCTATCCCGGCACGCCCGCCACTACCTCGCGATTTTCGACCAGGGCAAAGCCCTGGCCCTGTATCACACCAAGCGCCT
GGCCTCACCGGGGCAGCGCATCGTGTTGTACGCCAAAGACCGCGGCTGCACCGCCCCCGGCTGCACCATCCCCGGCTACT
ACAGCGAAGTGCATCACTGCACCGACTACGCCACCTGCCACACCACCGACATCAACGATCTGACCTTCGCCTGCGGACCC
CACCACCGCCTGCTGCAACCCGGCGCCTGGACCACCCACAAAAACGCCAAAGGGGAAACCGAATGGATTCCACCACCCCA
CCTGGACCGAAACCAACCCCGCACCAACACCTTCCACCACCCCGAAAAACTCCTCCGGGGTGAGAACGGGGGTGAAGACG
ACGACGGCGATGACGACGAGGCGGCGTAG

Upstream 100 bases:

>100_bases
GCGCACGCGTCCTGCCGCCGCCTAAATCGCTTGTGTCACTTTGGTTTCTGTCGTCACATTGCCGGGTTTTTTGTCGGTGC
CCCCGGATAGTTTGCGAGGT

Downstream 100 bases:

>100_bases
CGCTGGACGGCGCTAGAGAAGCCGAGCCTGCTCGGGCTCCGGCTTGGCCGGCTCGAGCAACTCCGGGCCGTTGTTGCGGA
CGTTGTTGACCAGCGTGGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 462; Mature: 461

Protein sequence:

>462_residues
MSSDREAVSAAFDAIDAALDDLLDCDYVALATREKLALLNRCEKLRRRLPAVEHPLINALARDATPAELGGRLSHAIAEA
TLISRAEAARRVHTAADLGPRVGLTGEPLPPLLAATAAAQREGSLGLEQVAVIRKFCHQLPGWIDQATRERAEADLAREA
TRYRPEQLAALAGTLADCLNPDGLYRDEDRARRRSLTLGNQHADGMSELRGLLTPELRATLEAVLAKLAAPGMCNPLDEN
PCVEGTPSQHAIDGDARSAAQRNHDGLLAGLRALLASGNLGQHNGLPASIIVTTTLADLETAAGRGLTGGGTLLPMSDVI
RLSRHARHYLAIFDQGKALALYHTKRLASPGQRIVLYAKDRGCTAPGCTIPGYYSEVHHCTDYATCHTTDINDLTFACGP
HHRLLQPGAWTTHKNAKGETEWIPPPHLDRNQPRTNTFHHPEKLLRGENGGEDDDGDDDEAA

Sequences:

>Translated_462_residues
MSSDREAVSAAFDAIDAALDDLLDCDYVALATREKLALLNRCEKLRRRLPAVEHPLINALARDATPAELGGRLSHAIAEA
TLISRAEAARRVHTAADLGPRVGLTGEPLPPLLAATAAAQREGSLGLEQVAVIRKFCHQLPGWIDQATRERAEADLAREA
TRYRPEQLAALAGTLADCLNPDGLYRDEDRARRRSLTLGNQHADGMSELRGLLTPELRATLEAVLAKLAAPGMCNPLDEN
PCVEGTPSQHAIDGDARSAAQRNHDGLLAGLRALLASGNLGQHNGLPASIIVTTTLADLETAAGRGLTGGGTLLPMSDVI
RLSRHARHYLAIFDQGKALALYHTKRLASPGQRIVLYAKDRGCTAPGCTIPGYYSEVHHCTDYATCHTTDINDLTFACGP
HHRLLQPGAWTTHKNAKGETEWIPPPHLDRNQPRTNTFHHPEKLLRGENGGEDDDGDDDEAA
>Mature_461_residues
SSDREAVSAAFDAIDAALDDLLDCDYVALATREKLALLNRCEKLRRRLPAVEHPLINALARDATPAELGGRLSHAIAEAT
LISRAEAARRVHTAADLGPRVGLTGEPLPPLLAATAAAQREGSLGLEQVAVIRKFCHQLPGWIDQATRERAEADLAREAT
RYRPEQLAALAGTLADCLNPDGLYRDEDRARRRSLTLGNQHADGMSELRGLLTPELRATLEAVLAKLAAPGMCNPLDENP
CVEGTPSQHAIDGDARSAAQRNHDGLLAGLRALLASGNLGQHNGLPASIIVTTTLADLETAAGRGLTGGGTLLPMSDVIR
LSRHARHYLAIFDQGKALALYHTKRLASPGQRIVLYAKDRGCTAPGCTIPGYYSEVHHCTDYATCHTTDINDLTFACGPH
HRLLQPGAWTTHKNAKGETEWIPPPHLDRNQPRTNTFHHPEKLLRGENGGEDDDGDDDEAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Rv1128c/1148c/1588c/1702c/1945/3466 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003870
- InterPro:   IPR003615 [H]

Pfam domain/function: PF02720 DUF222 [H]

EC number: NA

Molecular weight: Translated: 49758; Mature: 49627

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSDREAVSAAFDAIDAALDDLLDCDYVALATREKLALLNRCEKLRRRLPAVEHPLINAL
CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
ARDATPAELGGRLSHAIAEATLISRAEAARRVHTAADLGPRVGLTGEPLPPLLAATAAAQ
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
REGSLGLEQVAVIRKFCHQLPGWIDQATRERAEADLAREATRYRPEQLAALAGTLADCLN
HCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC
PDGLYRDEDRARRRSLTLGNQHADGMSELRGLLTPELRATLEAVLAKLAAPGMCNPLDEN
CCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCC
PCVEGTPSQHAIDGDARSAAQRNHDGLLAGLRALLASGNLGQHNGLPASIIVTTTLADLE
CCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHHH
TAAGRGLTGGGTLLPMSDVIRLSRHARHYLAIFDQGKALALYHTKRLASPGQRIVLYAKD
HHCCCCCCCCCCCCCHHHHHHHHHHHHHHEEEECCCCEEEEEHHHHHCCCCCEEEEEECC
RGCTAPGCTIPGYYSEVHHCTDYATCHTTDINDLTFACGPHHRLLQPGAWTTHKNAKGET
CCCCCCCCCCCCHHHHHHHHHCCCEEECCCCCCCEEECCCCHHHCCCCCCCCCCCCCCCC
EWIPPPHLDRNQPRTNTFHHPEKLLRGENGGEDDDGDDDEAA
CCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SSDREAVSAAFDAIDAALDDLLDCDYVALATREKLALLNRCEKLRRRLPAVEHPLINAL
CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
ARDATPAELGGRLSHAIAEATLISRAEAARRVHTAADLGPRVGLTGEPLPPLLAATAAAQ
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
REGSLGLEQVAVIRKFCHQLPGWIDQATRERAEADLAREATRYRPEQLAALAGTLADCLN
HCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC
PDGLYRDEDRARRRSLTLGNQHADGMSELRGLLTPELRATLEAVLAKLAAPGMCNPLDEN
CCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCC
PCVEGTPSQHAIDGDARSAAQRNHDGLLAGLRALLASGNLGQHNGLPASIIVTTTLADLE
CCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHHH
TAAGRGLTGGGTLLPMSDVIRLSRHARHYLAIFDQGKALALYHTKRLASPGQRIVLYAKD
HHCCCCCCCCCCCCCHHHHHHHHHHHHHHEEEECCCCEEEEEHHHHHCCCCCEEEEEECC
RGCTAPGCTIPGYYSEVHHCTDYATCHTTDINDLTFACGPHHRLLQPGAWTTHKNAKGET
CCCCCCCCCCCCHHHHHHHHHCCCEEECCCCCCCEEECCCCHHHCCCCCCCCCCCCCCCC
EWIPPPHLDRNQPRTNTFHHPEKLLRGENGGEDDDGDDDEAA
CCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]