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The map label for this gene is pdtaS [H]

Identifier: 41409419

GI number: 41409419

Start: 3690517

End: 3692016

Strand: Reverse

Name: pdtaS [H]

Synonym: MAP3321c

Alternate gene names: 41409419

Gene position: 3692016-3690517 (Counterclockwise)

Preceding gene: 41409420

Following gene: 41409416

Centisome position: 76.44

GC content: 70.2

Gene sequence:

>1500_bases
ATGTCCACTCTCGGTGATCTGCTCGCCGAGCACACCATGCTGCCGGGCAACGCGGTCGACCACCTGCACGCGGTGGTCGG
GGAGTGGCAGCTGCTGGCCGACCTGTCCTTCGCCGACTATCTGATGTGGGTGTGCCGCGACGACGGCATGCTGGTGTGCG
TGGCGCAGTGCCGGCCGAACACGGCGCCGACCGTGCTGCAAACCGACGCGGTGGGCACCGTCGTGGCCTCCGAGCGGCTG
ACGCTGGTCGCCGAGACCTTCGCCTCCGGCGCCGCCAAAGCCGATGACGTTGCGGCCCAACAAGATTCGTGGTTGCCCGG
CACTCACGTCGAGGCGTCCCCGGTGCGCTACGGCGGGCACGTGGTGGCGGTGCTGACCCGGCATCAGACCGCGGTGGCCG
CCGACCGCGCGTCGGGCCAGCTGGAGATCGCCTACCGGGAGTGCGCCGCGGACCTCGTCCACATGCTCGCCGAGGGCACC
TTTCCCGACGTGGGGGACGTGGCCATGTCGCGCTCCACCCCGCGCGCCGGCGACGGCTTCATCCGCCTCGACGTCAACGG
CGTCGTCGCCTACGCCAGCCCCAACGCGCTGTCGGCCTACCACCGGATGGGGCTCACCACCGAGCTGGAGGGCCACAACC
TCATCGAGATCACCCGGCCGCTGATCTCCGATTCGTTCGAGGCCCAGGAGATGGCCGAGCACGTCAAGGACCTGCTGGCC
GGCGGCAAGAGCATGCGGATGGAGGTCGACGCCGGCGGGGCGACCGTGCTGCTGCGCACCCTGCCGCTGGTGGTCAACGG
CGCCAGCGCCGGCGCGGCGGTGCTGATCCGCGACGTCACCGAGGTGAAGCGCCGCGACCGCGCGCTGATCTCCAAGGACG
CCACCATCCGCGAGATCCACCACCGGGTCAAGAACAACCTGCAGACCGTGGCCGCGCTGTTGCGGCTGCAGGCCCGTCGC
ACGACCAACCCCGAGGGGCGCGAAGCCCTCATCGAGTCGGTACGCCGGGTGTCGTCGATCGCGCTGGTGCACGACGCGCT
GTCGATGTCGGTGGACGAACAGGTCAACCTCGACGAGGTGATCGACCGGATCCTGCCGATCATGAACGACGTGGCGTCGG
TGGACCGCCCGATCCGGATCAACCGGGTCGGCGATCTGGGCGTGCTGGACTCCGACCGGGCCACGGCGCTGATCATGGTG
ATCACCGAGCTGGTGCAGAACGCGATCGAGCACGCCTTCGATCCGACGGCCGCCGAGGGGTCGGTGACGATCCGCGCCGA
ACGCTCGGCCCGCTGGCTCGACGTCGTGGTGCACGACGACGGCCGCGGCCTGCCGGAGGGATTCAGCCTGGAGGCCTCCG
ACAGCCTCGGCCTGCAGATCGTGCGCACCCTGGTGTCGGCGGAGCTGGACGGCACGCTAGGGATGAGCGAAGCCTCCGAA
CGCGGCACCGACGTGGTGTTGCGGGTGCCGATCGGGCGCCGGACCAGGATGTTGCTGTAG

Upstream 100 bases:

>100_bases
ACCGTCAGCAAGGTCAGCGTGTCGGTGGGTGACGTCATTCAGGCGGGCGACCTCATCGCGGTGATCAGCTAGCCCCGGGG
AACCACTCGGGAGTTATTCG

Downstream 100 bases:

>100_bases
CCGCGCGACCCGCACGCAAGAGTGCGGCCCCGACAATCGTCGAGGCCGCACCGTTTTGCGTTATCCGGGTTAAACCCCGC
TGCGGGCCTTTGTCCGGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 499; Mature: 498

Protein sequence:

>499_residues
MSTLGDLLAEHTMLPGNAVDHLHAVVGEWQLLADLSFADYLMWVCRDDGMLVCVAQCRPNTAPTVLQTDAVGTVVASERL
TLVAETFASGAAKADDVAAQQDSWLPGTHVEASPVRYGGHVVAVLTRHQTAVAADRASGQLEIAYRECAADLVHMLAEGT
FPDVGDVAMSRSTPRAGDGFIRLDVNGVVAYASPNALSAYHRMGLTTELEGHNLIEITRPLISDSFEAQEMAEHVKDLLA
GGKSMRMEVDAGGATVLLRTLPLVVNGASAGAAVLIRDVTEVKRRDRALISKDATIREIHHRVKNNLQTVAALLRLQARR
TTNPEGREALIESVRRVSSIALVHDALSMSVDEQVNLDEVIDRILPIMNDVASVDRPIRINRVGDLGVLDSDRATALIMV
ITELVQNAIEHAFDPTAAEGSVTIRAERSARWLDVVVHDDGRGLPEGFSLEASDSLGLQIVRTLVSAELDGTLGMSEASE
RGTDVVLRVPIGRRTRMLL

Sequences:

>Translated_499_residues
MSTLGDLLAEHTMLPGNAVDHLHAVVGEWQLLADLSFADYLMWVCRDDGMLVCVAQCRPNTAPTVLQTDAVGTVVASERL
TLVAETFASGAAKADDVAAQQDSWLPGTHVEASPVRYGGHVVAVLTRHQTAVAADRASGQLEIAYRECAADLVHMLAEGT
FPDVGDVAMSRSTPRAGDGFIRLDVNGVVAYASPNALSAYHRMGLTTELEGHNLIEITRPLISDSFEAQEMAEHVKDLLA
GGKSMRMEVDAGGATVLLRTLPLVVNGASAGAAVLIRDVTEVKRRDRALISKDATIREIHHRVKNNLQTVAALLRLQARR
TTNPEGREALIESVRRVSSIALVHDALSMSVDEQVNLDEVIDRILPIMNDVASVDRPIRINRVGDLGVLDSDRATALIMV
ITELVQNAIEHAFDPTAAEGSVTIRAERSARWLDVVVHDDGRGLPEGFSLEASDSLGLQIVRTLVSAELDGTLGMSEASE
RGTDVVLRVPIGRRTRMLL
>Mature_498_residues
STLGDLLAEHTMLPGNAVDHLHAVVGEWQLLADLSFADYLMWVCRDDGMLVCVAQCRPNTAPTVLQTDAVGTVVASERLT
LVAETFASGAAKADDVAAQQDSWLPGTHVEASPVRYGGHVVAVLTRHQTAVAADRASGQLEIAYRECAADLVHMLAEGTF
PDVGDVAMSRSTPRAGDGFIRLDVNGVVAYASPNALSAYHRMGLTTELEGHNLIEITRPLISDSFEAQEMAEHVKDLLAG
GKSMRMEVDAGGATVLLRTLPLVVNGASAGAAVLIRDVTEVKRRDRALISKDATIREIHHRVKNNLQTVAALLRLQARRT
TNPEGREALIESVRRVSSIALVHDALSMSVDEQVNLDEVIDRILPIMNDVASVDRPIRINRVGDLGVLDSDRATALIMVI
TELVQNAIEHAFDPTAAEGSVTIRAERSARWLDVVVHDDGRGLPEGFSLEASDSLGLQIVRTLVSAELDGTLGMSEASER
GTDVVLRVPIGRRTRMLL

Specific function: Member of the two-component regulatory system pdtaR/pdtaS. Autophosphorylates, probably on a histidine residue, and transfers its phosphate group to pdtaR [H]

COG id: COG3920

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR022066
- InterPro:   IPR011495
- InterPro:   IPR005467 [H]

Pfam domain/function: PF12282 H_kinase_N; PF02518 HATPase_c; PF07568 HisKA_2 [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 53744; Mature: 53613

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTLGDLLAEHTMLPGNAVDHLHAVVGEWQLLADLSFADYLMWVCRDDGMLVCVAQCRPN
CCHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHCCHHHHHHHHCCCCCEEEEEEECCCC
TAPTVLQTDAVGTVVASERLTLVAETFASGAAKADDVAAQQDSWLPGTHVEASPVRYGGH
CCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCEEECCE
VVAVLTRHQTAVAADRASGQLEIAYRECAADLVHMLAEGTFPDVGDVAMSRSTPRAGDGF
EEEEEECCHHHHHHHCCCCEEEEHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCE
IRLDVNGVVAYASPNALSAYHRMGLTTELEGHNLIEITRPLISDSFEAQEMAEHVKDLLA
EEEEECEEEEEECCCHHHHHHHCCCEEECCCCCCCEEHHHHHCCCCCHHHHHHHHHHHHC
GGKSMRMEVDAGGATVLLRTLPLVVNGASAGAAVLIRDVTEVKRRDRALISKDATIREIH
CCCCEEEEECCCCCEEHEEHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
HRVKNNLQTVAALLRLQARRTTNPEGREALIESVRRVSSIALVHDALSMSVDEQVNLDEV
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
IDRILPIMNDVASVDRPIRINRVGDLGVLDSDRATALIMVITELVQNAIEHAFDPTAAEG
HHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
SVTIRAERSARWLDVVVHDDGRGLPEGFSLEASDSLGLQIVRTLVSAELDGTLGMSEASE
CEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHC
RGTDVVLRVPIGRRTRMLL
CCCEEEEECCCCCCCCCCC
>Mature Secondary Structure 
STLGDLLAEHTMLPGNAVDHLHAVVGEWQLLADLSFADYLMWVCRDDGMLVCVAQCRPN
CHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHCCHHHHHHHHCCCCCEEEEEEECCCC
TAPTVLQTDAVGTVVASERLTLVAETFASGAAKADDVAAQQDSWLPGTHVEASPVRYGGH
CCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCEEECCE
VVAVLTRHQTAVAADRASGQLEIAYRECAADLVHMLAEGTFPDVGDVAMSRSTPRAGDGF
EEEEEECCHHHHHHHCCCCEEEEHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCE
IRLDVNGVVAYASPNALSAYHRMGLTTELEGHNLIEITRPLISDSFEAQEMAEHVKDLLA
EEEEECEEEEEECCCHHHHHHHCCCEEECCCCCCCEEHHHHHCCCCCHHHHHHHHHHHHC
GGKSMRMEVDAGGATVLLRTLPLVVNGASAGAAVLIRDVTEVKRRDRALISKDATIREIH
CCCCEEEEECCCCCEEHEEHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
HRVKNNLQTVAALLRLQARRTTNPEGREALIESVRRVSSIALVHDALSMSVDEQVNLDEV
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
IDRILPIMNDVASVDRPIRINRVGDLGVLDSDRATALIMVITELVQNAIEHAFDPTAAEG
HHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
SVTIRAERSARWLDVVVHDDGRGLPEGFSLEASDSLGLQIVRTLVSAELDGTLGMSEASE
CEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHC
RGTDVVLRVPIGRRTRMLL
CCCEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]