| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409416
Identifier: 41409416
GI number: 41409416
Start: 3688370
End: 3688861
Strand: Reverse
Name: 41409416
Synonym: MAP3318c
Alternate gene names: NA
Gene position: 3688861-3688370 (Counterclockwise)
Preceding gene: 41409419
Following gene: 41409412
Centisome position: 76.38
GC content: 75.61
Gene sequence:
>492_bases ATGCGCGCCGCAGCGCGGCGCGAGGAGGAGTCGGACGGGTGTCGTGGCTACGCTGACGCTGTGACGACGCCCGCCGCCCC GACCGCCGTTCGCCGTGCCGGCCTGATCGTCCTGCTGCAGGGGGTGGCCGCGCTGGTCGTGGCGGTGGTGCTGGTGGTGC GCGGGATCGCCGGCGCCGACCAGCATGTGGTCAACGGCCTGGCCACCGCGGGCTGGTTCGTGCTGGTCGGCGCCGCGGTG ATCGGCGCGGGGCGCGCGTTGACCCGCGGCAAGCGGTGGGGCCGCGGGCTGGCGGTGATCACCCAGCTGCTGTTGTTGCC GGTCGCCTGGTATCTGGCGGTGGGGTCGCATCAGCCGGGCTTCGGGATCCCGGCCGGCGCGGTGGCCCTGGTCGTGCTGG GCTTGCTGTTCAGTCCGGCCGCGGTGCGCTGGGCCGCCGGCGGTCAGGACGACTCCGCCAGCTCCGCCAACCGCGGCCCG GACAGCCGGTAG
Upstream 100 bases:
>100_bases TCAGCACGGCCCGCATGAGCCACGAGCTTATGCGGTGCGACGATGCGCGCCGCAGCGCGGCGCGAGGAGGAGTGCCGCGA TCGAACCGAGCGGTGCGACG
Downstream 100 bases:
>100_bases GTGGTCCATTCCCGCTGCGGCCGGGCGCCGATCCCGTCGTAGAGGGCGATGGCGTCGGTGTTCCAGTTCAACACCGCCCA ACTCAGCCGCGTGTAGCCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MRAAARREEESDGCRGYADAVTTPAAPTAVRRAGLIVLLQGVAALVVAVVLVVRGIAGADQHVVNGLATAGWFVLVGAAV IGAGRALTRGKRWGRGLAVITQLLLLPVAWYLAVGSHQPGFGIPAGAVALVVLGLLFSPAAVRWAAGGQDDSASSANRGP DSR
Sequences:
>Translated_163_residues MRAAARREEESDGCRGYADAVTTPAAPTAVRRAGLIVLLQGVAALVVAVVLVVRGIAGADQHVVNGLATAGWFVLVGAAV IGAGRALTRGKRWGRGLAVITQLLLLPVAWYLAVGSHQPGFGIPAGAVALVVLGLLFSPAAVRWAAGGQDDSASSANRGP DSR >Mature_163_residues MRAAARREEESDGCRGYADAVTTPAAPTAVRRAGLIVLLQGVAALVVAVVLVVRGIAGADQHVVNGLATAGWFVLVGAAV IGAGRALTRGKRWGRGLAVITQLLLLPVAWYLAVGSHQPGFGIPAGAVALVVLGLLFSPAAVRWAAGGQDDSASSANRGP DSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16510; Mature: 16510
Theoretical pI: Translated: 11.49; Mature: 11.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAAARREEESDGCRGYADAVTTPAAPTAVRRAGLIVLLQGVAALVVAVVLVVRGIAGAD CCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH QHVVNGLATAGWFVLVGAAVIGAGRALTRGKRWGRGLAVITQLLLLPVAWYLAVGSHQPG HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCC FGIPAGAVALVVLGLLFSPAAVRWAAGGQDDSASSANRGPDSR CCCCHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRAAARREEESDGCRGYADAVTTPAAPTAVRRAGLIVLLQGVAALVVAVVLVVRGIAGAD CCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH QHVVNGLATAGWFVLVGAAVIGAGRALTRGKRWGRGLAVITQLLLLPVAWYLAVGSHQPG HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCC FGIPAGAVALVVLGLLFSPAAVRWAAGGQDDSASSANRGPDSR CCCCHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA