| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409381
Identifier: 41409381
GI number: 41409381
Start: 3643204
End: 3644112
Strand: Reverse
Name: 41409381
Synonym: MAP3283c
Alternate gene names: NA
Gene position: 3644112-3643204 (Counterclockwise)
Preceding gene: 41409382
Following gene: 41409380
Centisome position: 75.45
GC content: 69.42
Gene sequence:
>909_bases ATGTTCACCGTCGACGACAAGGCAACCGGCCCGCACGACGCCGCCCTCGATCACGAGCGGATCGTCCTGCAGGCCCGCGA CGTCGACTTCGACTGGTCGGCGCTGCCGTTCTACTACGTGCCGGGCGAGCCCTTCACCACGCACTTCTGCAACGTGTTGC ACCTGCTGCTGCCGGCCGGTGAGGAGTTCATCGTCGAGGCGTTCAAGGACACCCTGCCGCTGATCAAGGACGATCAACTG CGGCGCGACGTGCAGGGCTTCATCAGCCAGGAGGCCATGCACTCCCAGGCGCACGCCGGGGTGCTCGGGCACTTCGCGGC CAAGGGCATCGACGTGACCCCGTTCACCGACCAAATGCGTTGGCTGTTCGGCCAACTCATCGGTGACCGGCCGCGCTGGA GCCCGCGCCGACGGCAGAGCTGGCTGCTGGAGCGGGTCTCGATGGTGGCCGCGCTCGAGCACTACACCGCGATCCTCGGC GAATGGATCCTGGACACCCCGCAACACGACGCGCTGGGCACCGATCCGGTGATGCTGGACCTGCTGCGCTGGCACGGCGC CGAGGAGGTCGAGCACAAGGCGGTCGCCTTCGACACCATGAAGCACCTGCGCGCCGGGTACTGGCGGCAGGTGCGCACCC AGCTGCTGGTCACCCCCGCGTTGCTGTGGCTGTTCATCCGCGGCGTGCGGTTCATGTACTCGGTCGACCCGCACCTGCCG CCGGGCAGCAAACCGCGCTGGCGCGACTACTTCTCGGCGGCGCGCCGCGGTCTGGTGCCGGGACCGTTCGAGTTCCTGCG GGTGATCGGCGCGTACTACACGCCGGGCTTTCACCCGTCCCAGCTGGGCGGGGTGGGGCGCGCCGTCGACTACCTGGCCC GCTCACCGGCCGCCCGGGCCGCGCACTGA
Upstream 100 bases:
>100_bases CCTGGTGCGGTTCTTGCGCACCGAGCGGATGATCACTGAGGTGGAGGACGAGGCGCAACGCAGCGCCTGACCGGCGCGCT ACTCGGAAGGGAAGACGACG
Downstream 100 bases:
>100_bases CCATGACCACCGAAGTGGCCTCCACCACGGTCACCGCCACCGACGGCGTGCGACTGGCGGTGCACACCTACACCGGGATC GACCCCGCACGGCCGACCGT
Product: hypothetical protein
Products: NA
Alternate protein names: FF Domain-Containing Protein; Metal-Dependent Hydrolase-Like Protein; Conserved Protein UCP; Phthalate 4 5-Dioxygenase; FF Domain Protein; Metal-Dependent Hydrolase-Like
Number of amino acids: Translated: 302; Mature: 302
Protein sequence:
>302_residues MFTVDDKATGPHDAALDHERIVLQARDVDFDWSALPFYYVPGEPFTTHFCNVLHLLLPAGEEFIVEAFKDTLPLIKDDQL RRDVQGFISQEAMHSQAHAGVLGHFAAKGIDVTPFTDQMRWLFGQLIGDRPRWSPRRRQSWLLERVSMVAALEHYTAILG EWILDTPQHDALGTDPVMLDLLRWHGAEEVEHKAVAFDTMKHLRAGYWRQVRTQLLVTPALLWLFIRGVRFMYSVDPHLP PGSKPRWRDYFSAARRGLVPGPFEFLRVIGAYYTPGFHPSQLGGVGRAVDYLARSPAARAAH
Sequences:
>Translated_302_residues MFTVDDKATGPHDAALDHERIVLQARDVDFDWSALPFYYVPGEPFTTHFCNVLHLLLPAGEEFIVEAFKDTLPLIKDDQL RRDVQGFISQEAMHSQAHAGVLGHFAAKGIDVTPFTDQMRWLFGQLIGDRPRWSPRRRQSWLLERVSMVAALEHYTAILG EWILDTPQHDALGTDPVMLDLLRWHGAEEVEHKAVAFDTMKHLRAGYWRQVRTQLLVTPALLWLFIRGVRFMYSVDPHLP PGSKPRWRDYFSAARRGLVPGPFEFLRVIGAYYTPGFHPSQLGGVGRAVDYLARSPAARAAH >Mature_302_residues MFTVDDKATGPHDAALDHERIVLQARDVDFDWSALPFYYVPGEPFTTHFCNVLHLLLPAGEEFIVEAFKDTLPLIKDDQL RRDVQGFISQEAMHSQAHAGVLGHFAAKGIDVTPFTDQMRWLFGQLIGDRPRWSPRRRQSWLLERVSMVAALEHYTAILG EWILDTPQHDALGTDPVMLDLLRWHGAEEVEHKAVAFDTMKHLRAGYWRQVRTQLLVTPALLWLFIRGVRFMYSVDPHLP PGSKPRWRDYFSAARRGLVPGPFEFLRVIGAYYTPGFHPSQLGGVGRAVDYLARSPAARAAH
Specific function: Unknown
COG id: COG3687
COG function: function code R; Predicted metal-dependent hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34402; Mature: 34402
Theoretical pI: Translated: 7.09; Mature: 7.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFTVDDKATGPHDAALDHERIVLQARDVDFDWSALPFYYVPGEPFTTHFCNVLHLLLPAG CCCCCCCCCCCCCHHCCCCCEEEEECCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCC EEFIVEAFKDTLPLIKDDQLRRDVQGFISQEAMHSQAHAGVLGHFAAKGIDVTPFTDQMR HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH WLFGQLIGDRPRWSPRRRQSWLLERVSMVAALEHYTAILGEWILDTPQHDALGTDPVMLD HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH LLRWHGAEEVEHKAVAFDTMKHLRAGYWRQVRTQLLVTPALLWLFIRGVRFMYSVDPHLP HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PGSKPRWRDYFSAARRGLVPGPFEFLRVIGAYYTPGFHPSQLGGVGRAVDYLARSPAARA CCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCC AH CC >Mature Secondary Structure MFTVDDKATGPHDAALDHERIVLQARDVDFDWSALPFYYVPGEPFTTHFCNVLHLLLPAG CCCCCCCCCCCCCHHCCCCCEEEEECCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCC EEFIVEAFKDTLPLIKDDQLRRDVQGFISQEAMHSQAHAGVLGHFAAKGIDVTPFTDQMR HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH WLFGQLIGDRPRWSPRRRQSWLLERVSMVAALEHYTAILGEWILDTPQHDALGTDPVMLD HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH LLRWHGAEEVEHKAVAFDTMKHLRAGYWRQVRTQLLVTPALLWLFIRGVRFMYSVDPHLP HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PGSKPRWRDYFSAARRGLVPGPFEFLRVIGAYYTPGFHPSQLGGVGRAVDYLARSPAARA CCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCC AH CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA