| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409343
Identifier: 41409343
GI number: 41409343
Start: 3600733
End: 3601701
Strand: Direct
Name: 41409343
Synonym: MAP3245
Alternate gene names: NA
Gene position: 3600733-3601701 (Clockwise)
Preceding gene: 41409342
Following gene: 41409344
Centisome position: 74.55
GC content: 71.52
Gene sequence:
>969_bases ATGTTGGATCCTGTCCGAGCAAAGCGCGTCCTGGTGTGGCATGTGCACGGCTCGTGGACGCAGTCCTTCGTCGCGGGCCG GCACCGCTACCTGATCCCGGTGGCCCCCGACCGCGGCCCGGACGGCATCGGACTGGCCGGCCGGTGCTGGCCCAACGCCC GCGAGGTGGCATTCGAGGACCTGGCCGACCGCGATATCGACCTGGTGGTGCTGCAACGCCCGCACGAGGCCGAGCTGGTC GCCCGCTGGGCGGGCCGCCGGGTCGGGGTCGACGTGCCGGCGGTCTACGTCGAGCACAACACCCCGCGCCCCAGCGCGGC ACAGACCCGGCATCCGCTGGCCGACCGAGCCGACATCCCCCTGGTGCACGTCACCGACTTCAACCGGTTGATGTGGGACA ACGGGATTGCGCCGACCCGGGTCATCGACCACGGGGTGGCCGATCCGGGGCGGCTGTACAGCGGCGAGATTCCCCGGGTG GCCACCATGATCAACGAGCCGGGGCGCCGCGGCCGCGTCGTCGGCGCCGATCTGCTGGAACCGTTGTCGGCCTACGCCCA GATCGACGTATGGGGCATCGGCACCGAGGGGTTGTGCGCCAACCGCGGCGCGGTGCGCGGCCGCGGCGACGTGCCCACCC CGCGGCTGTTCGGAGACGTCGCGCGCCGGCGGGTCTACCTGCACACGGCCCGCTGGACCTCACTCGGGCTGTCCCTGATC GAGGCCATGCTGCTGGGCATGCCGGTGGTGGCCGTCGGCTCGACCATGGCGCCGTTCGTAATCCCTTGCGAGGCAGGAGT TGTCAGCGCCGACCCAGCCAGACTGGGTGAGGGGTTGCGGGGCTTCCTGGACGACCAGGCCAGGGCGGTGGCCGCCGGCA AGGCCGCCCGGGACTTCGCCACCGCCCGGTTCGGACTCAAACGCTTTCTGGCCGACTGGGACCAAGTGATCGGGGAGCTG TGCAGATGA
Upstream 100 bases:
>100_bases GTTTACAGAGGTTCGCTGCGCCTCGCCGGGACCGTGCGCCCGGGGAAAACGTCGGGCCCGGCGCTGTTTATGCCAGTACC TACAGGGTATTTGGCTCGCC
Downstream 100 bases:
>100_bases GCAGGGAAGGAACCCGCATGAGAATCGCGATGATCTCCGAACACGCCAGCCCGCTGGCACATTTGGGCGGCGTGGACGCG GGCGGACAGAACGTCCACGT
Product: hypothetical protein
Products: NA
Alternate protein names: Glycosyltransferase; Glycosyl Transferase; Group 1 Glycosyl Transferase; Lipopolysaccharide N-Acetylglucosaminyltransferase; Glycosyl Transferase Group 1 Family Protein; Glycosyl Transferase Group 1 Protein; Group 1 Glycosyl Transferase Protein; LPS Biosynthesis Related Transferase
Number of amino acids: Translated: 322; Mature: 322
Protein sequence:
>322_residues MLDPVRAKRVLVWHVHGSWTQSFVAGRHRYLIPVAPDRGPDGIGLAGRCWPNAREVAFEDLADRDIDLVVLQRPHEAELV ARWAGRRVGVDVPAVYVEHNTPRPSAAQTRHPLADRADIPLVHVTDFNRLMWDNGIAPTRVIDHGVADPGRLYSGEIPRV ATMINEPGRRGRVVGADLLEPLSAYAQIDVWGIGTEGLCANRGAVRGRGDVPTPRLFGDVARRRVYLHTARWTSLGLSLI EAMLLGMPVVAVGSTMAPFVIPCEAGVVSADPARLGEGLRGFLDDQARAVAAGKAARDFATARFGLKRFLADWDQVIGEL CR
Sequences:
>Translated_322_residues MLDPVRAKRVLVWHVHGSWTQSFVAGRHRYLIPVAPDRGPDGIGLAGRCWPNAREVAFEDLADRDIDLVVLQRPHEAELV ARWAGRRVGVDVPAVYVEHNTPRPSAAQTRHPLADRADIPLVHVTDFNRLMWDNGIAPTRVIDHGVADPGRLYSGEIPRV ATMINEPGRRGRVVGADLLEPLSAYAQIDVWGIGTEGLCANRGAVRGRGDVPTPRLFGDVARRRVYLHTARWTSLGLSLI EAMLLGMPVVAVGSTMAPFVIPCEAGVVSADPARLGEGLRGFLDDQARAVAAGKAARDFATARFGLKRFLADWDQVIGEL CR >Mature_322_residues MLDPVRAKRVLVWHVHGSWTQSFVAGRHRYLIPVAPDRGPDGIGLAGRCWPNAREVAFEDLADRDIDLVVLQRPHEAELV ARWAGRRVGVDVPAVYVEHNTPRPSAAQTRHPLADRADIPLVHVTDFNRLMWDNGIAPTRVIDHGVADPGRLYSGEIPRV ATMINEPGRRGRVVGADLLEPLSAYAQIDVWGIGTEGLCANRGAVRGRGDVPTPRLFGDVARRRVYLHTARWTSLGLSLI EAMLLGMPVVAVGSTMAPFVIPCEAGVVSADPARLGEGLRGFLDDQARAVAAGKAARDFATARFGLKRFLADWDQVIGEL CR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35165; Mature: 35165
Theoretical pI: Translated: 8.65; Mature: 8.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDPVRAKRVLVWHVHGSWTQSFVAGRHRYLIPVAPDRGPDGIGLAGRCWPNAREVAFED CCCCCCCCEEEEEEECCCHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHH LADRDIDLVVLQRPHEAELVARWAGRRVGVDVPAVYVEHNTPRPSAAQTRHPLADRADIP HCCCCCEEEEEECCCHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCHHHCCCCCCCCCCC LVHVTDFNRLMWDNGIAPTRVIDHGVADPGRLYSGEIPRVATMINEPGRRGRVVGADLLE EEEECCCCHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCEECHHHHH PLSAYAQIDVWGIGTEGLCANRGAVRGRGDVPTPRLFGDVARRRVYLHTARWTSLGLSLI HHHHHHEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHEEEEEEHHHHHHHHHHH EAMLLGMPVVAVGSTMAPFVIPCEAGVVSADPARLGEGLRGFLDDQARAVAAGKAARDFA HHHHHCCCHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHH TARFGLKRFLADWDQVIGELCR HHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLDPVRAKRVLVWHVHGSWTQSFVAGRHRYLIPVAPDRGPDGIGLAGRCWPNAREVAFED CCCCCCCCEEEEEEECCCHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHH LADRDIDLVVLQRPHEAELVARWAGRRVGVDVPAVYVEHNTPRPSAAQTRHPLADRADIP HCCCCCEEEEEECCCHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCHHHCCCCCCCCCCC LVHVTDFNRLMWDNGIAPTRVIDHGVADPGRLYSGEIPRVATMINEPGRRGRVVGADLLE EEEECCCCHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCEECHHHHH PLSAYAQIDVWGIGTEGLCANRGAVRGRGDVPTPRLFGDVARRRVYLHTARWTSLGLSLI HHHHHHEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHEEEEEEHHHHHHHHHHH EAMLLGMPVVAVGSTMAPFVIPCEAGVVSADPARLGEGLRGFLDDQARAVAAGKAARDFA HHHHHCCCHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHH TARFGLKRFLADWDQVIGELCR HHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA