Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41409318

Identifier: 41409318

GI number: 41409318

Start: 3571562

End: 3572515

Strand: Reverse

Name: 41409318

Synonym: MAP3220c

Alternate gene names: NA

Gene position: 3572515-3571562 (Counterclockwise)

Preceding gene: 41409320

Following gene: 41409317

Centisome position: 73.97

GC content: 75.16

Gene sequence:

>954_bases
ATGCCCGGGATGGACAAGCCGACGGGGCGGGTCGTCGCCCTGATCGTTCTGTTGCTCGTGGTCGCCGCCCTGCGCGGGTA
CCTGCCCGCCCAACACGACGCGACGCGCAGCGAGGCGGGCGGCCGGGCGGCGCTGGGCCTGGTGGTGGCCATCCTCGCGG
TGACGCTGGCGCTGATCGCGGTCGCGATCGTCGCGCGGTTGAAGGACCCGCGGGCGCCGGCTCCGCCCGCCGGCGCGCTG
TCGGAGACGCTGGGCGCCGGCAGGGGCCGCCCGACCTGGCGGGTGTTGCTGATCGGGCTCGGCGTGATCGTGGCCTGGCT
GCTGATCGTGATGCTGCTGGCCCGGCTGTTCGCGTCGCACGGGCTCTCGCCCGCCCCGCCGCCCGGCACCGGTGCGTCGC
CGCCACCGCACCCGGCGGCACCCCCGGCGCCGCCGCCGCAGCACCCGCAGCGCCCGCGCGACGGGTCGCAGGACACGTTG
GGCATCCTGCTCGCCGGCACGGTCGCGATGCTGTTGATGGTCGTCGCCTCAGCGGTGGCCGGCGCGCGGCGCCGGTGGCG
GTCGCCGGCGCCGGCCGTCCCCGACGAACCGGCCGAAAACCCGGCGCCGCAACCACATTCGGAGTCGCTGGCGCGTGCGG
CCGAACGCGGGTTGGCCGAGATGGCCGACCTGCGCCGCGACCCGCGCGAGGCCATCATCGCCTGCTACGCCGCGATGGAA
CGCGAACTGGCGCACGTTCCCGGCGCCGTGCCGCAGGACTTCGACACCCCCAGCGAGGTGCTGGCCCGCGCGGTGGAACA
CCATGCGCTGCACGCCGACAACGCCGTCCAGCTGGTGAACCTGTTCACCGAGGCGCGGTTCAGCCCGCACGTGATGAACG
AGGGCCACCGCGACGTGGCGGTGCGGGTGTTGCGGCTGGTGCTCGACGAACTGGGGAGCCGGAGTGTCGCATGA

Upstream 100 bases:

>100_bases
AAGCGGTGCGGGCGGTTCTGGCCCCGGGACCGCCTGACGTGCAAGTATGGGCAAAGCCAGTGCCGCACCAGCGGCAGGCA
ACCGGTCGAGTGGTGTGCCG

Downstream 100 bases:

>100_bases
AAAAGACTGTGGCCCTGGGTCTTTGCTTGATCATCGGGATCGAGCTGCTGGCGCTGACCCAGCACGACCGCCGGCTGGTG
CTGACGGCCTCCGGCGTCGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 317; Mature: 316

Protein sequence:

>317_residues
MPGMDKPTGRVVALIVLLLVVAALRGYLPAQHDATRSEAGGRAALGLVVAILAVTLALIAVAIVARLKDPRAPAPPAGAL
SETLGAGRGRPTWRVLLIGLGVIVAWLLIVMLLARLFASHGLSPAPPPGTGASPPPHPAAPPAPPPQHPQRPRDGSQDTL
GILLAGTVAMLLMVVASAVAGARRRWRSPAPAVPDEPAENPAPQPHSESLARAAERGLAEMADLRRDPREAIIACYAAME
RELAHVPGAVPQDFDTPSEVLARAVEHHALHADNAVQLVNLFTEARFSPHVMNEGHRDVAVRVLRLVLDELGSRSVA

Sequences:

>Translated_317_residues
MPGMDKPTGRVVALIVLLLVVAALRGYLPAQHDATRSEAGGRAALGLVVAILAVTLALIAVAIVARLKDPRAPAPPAGAL
SETLGAGRGRPTWRVLLIGLGVIVAWLLIVMLLARLFASHGLSPAPPPGTGASPPPHPAAPPAPPPQHPQRPRDGSQDTL
GILLAGTVAMLLMVVASAVAGARRRWRSPAPAVPDEPAENPAPQPHSESLARAAERGLAEMADLRRDPREAIIACYAAME
RELAHVPGAVPQDFDTPSEVLARAVEHHALHADNAVQLVNLFTEARFSPHVMNEGHRDVAVRVLRLVLDELGSRSVA
>Mature_316_residues
PGMDKPTGRVVALIVLLLVVAALRGYLPAQHDATRSEAGGRAALGLVVAILAVTLALIAVAIVARLKDPRAPAPPAGALS
ETLGAGRGRPTWRVLLIGLGVIVAWLLIVMLLARLFASHGLSPAPPPGTGASPPPHPAAPPAPPPQHPQRPRDGSQDTLG
ILLAGTVAMLLMVVASAVAGARRRWRSPAPAVPDEPAENPAPQPHSESLARAAERGLAEMADLRRDPREAIIACYAAMER
ELAHVPGAVPQDFDTPSEVLARAVEHHALHADNAVQLVNLFTEARFSPHVMNEGHRDVAVRVLRLVLDELGSRSVA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33222; Mature: 33091

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGMDKPTGRVVALIVLLLVVAALRGYLPAQHDATRSEAGGRAALGLVVAILAVTLALIA
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHH
VAIVARLKDPRAPAPPAGALSETLGAGRGRPTWRVLLIGLGVIVAWLLIVMLLARLFASH
HHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GLSPAPPPGTGASPPPHPAAPPAPPPQHPQRPRDGSQDTLGILLAGTVAMLLMVVASAVA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
GARRRWRSPAPAVPDEPAENPAPQPHSESLARAAERGLAEMADLRRDPREAIIACYAAME
HHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
RELAHVPGAVPQDFDTPSEVLARAVEHHALHADNAVQLVNLFTEARFSPHVMNEGHRDVA
HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHCCCHHHHH
VRVLRLVLDELGSRSVA
HHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
PGMDKPTGRVVALIVLLLVVAALRGYLPAQHDATRSEAGGRAALGLVVAILAVTLALIA
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHH
VAIVARLKDPRAPAPPAGALSETLGAGRGRPTWRVLLIGLGVIVAWLLIVMLLARLFASH
HHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GLSPAPPPGTGASPPPHPAAPPAPPPQHPQRPRDGSQDTLGILLAGTVAMLLMVVASAVA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
GARRRWRSPAPAVPDEPAENPAPQPHSESLARAAERGLAEMADLRRDPREAIIACYAAME
HHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
RELAHVPGAVPQDFDTPSEVLARAVEHHALHADNAVQLVNLFTEARFSPHVMNEGHRDVA
HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHCCCHHHHH
VRVLRLVLDELGSRSVA
HHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA