| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409317
Identifier: 41409317
GI number: 41409317
Start: 3571083
End: 3571565
Strand: Reverse
Name: 41409317
Synonym: MAP3219c
Alternate gene names: NA
Gene position: 3571565-3571083 (Counterclockwise)
Preceding gene: 41409318
Following gene: 41409316
Centisome position: 73.95
GC content: 69.15
Gene sequence:
>483_bases ATGAAAAAGACTGTGGCCCTGGGTCTTTGCTTGATCATCGGGATCGAGCTGCTGGCGCTGACCCAGCACGACCGCCGGCT GGTGCTGACGGCCTCCGGCGTCGGGCTGGCCCTGGTGCTGCTCAGCCTGCGGCGTGCGCTCGGCCGCGGCGCCGAACGCG AATCCAAGCACGACGCCGACGATCTCGGCGATTCACTGCGCCGCTGGCTTGCGGCCACCGAGACGACGATCCGGTGGTCG GAGTCCACCCGGGCCGACTGGGACCGGCACCTGCGCCCGATGCTCGCCCGCCGCTACGCGATCGCAACCGGCCAACGGCA AGCCAAGGACCCGGCGTCCTTCCAGGCGACCGGGCAGATGCTCTTCGGCGCCGAACTGTGGGAGTGGGTCAACCCCAACA ACGTCACCCGCACCGGTGGGCGTCAACCCGGCCCGGGACGCGCGGCGCTGGAAGAGATTCTGCGAAAGCTGGAGCAGGTA TGA
Upstream 100 bases:
>100_bases AGGCGCGGTTCAGCCCGCACGTGATGAACGAGGGCCACCGCGACGTGGCGGTGCGGGTGTTGCGGCTGGTGCTCGACGAA CTGGGGAGCCGGAGTGTCGC
Downstream 100 bases:
>100_bases CAGGGGGCGCGATCCGACCATGACTCTGCCGGCCGCAACCACGACGGCACACTGCGAGGCGATTCTCGACGAGATAGAAC GCGTGGTGGTGGGCAAACGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MKKTVALGLCLIIGIELLALTQHDRRLVLTASGVGLALVLLSLRRALGRGAERESKHDADDLGDSLRRWLAATETTIRWS ESTRADWDRHLRPMLARRYAIATGQRQAKDPASFQATGQMLFGAELWEWVNPNNVTRTGGRQPGPGRAALEEILRKLEQV
Sequences:
>Translated_160_residues MKKTVALGLCLIIGIELLALTQHDRRLVLTASGVGLALVLLSLRRALGRGAERESKHDADDLGDSLRRWLAATETTIRWS ESTRADWDRHLRPMLARRYAIATGQRQAKDPASFQATGQMLFGAELWEWVNPNNVTRTGGRQPGPGRAALEEILRKLEQV >Mature_160_residues MKKTVALGLCLIIGIELLALTQHDRRLVLTASGVGLALVLLSLRRALGRGAERESKHDADDLGDSLRRWLAATETTIRWS ESTRADWDRHLRPMLARRYAIATGQRQAKDPASFQATGQMLFGAELWEWVNPNNVTRTGGRQPGPGRAALEEILRKLEQV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17820; Mature: 17820
Theoretical pI: Translated: 10.88; Mature: 10.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTVALGLCLIIGIELLALTQHDRRLVLTASGVGLALVLLSLRRALGRGAERESKHDAD CCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCHH DLGDSLRRWLAATETTIRWSESTRADWDRHLRPMLARRYAIATGQRQAKDPASFQATGQM HHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH LFGAELWEWVNPNNVTRTGGRQPGPGRAALEEILRKLEQV HHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MKKTVALGLCLIIGIELLALTQHDRRLVLTASGVGLALVLLSLRRALGRGAERESKHDAD CCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCHH DLGDSLRRWLAATETTIRWSESTRADWDRHLRPMLARRYAIATGQRQAKDPASFQATGQM HHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH LFGAELWEWVNPNNVTRTGGRQPGPGRAALEEILRKLEQV HHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA