| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
Click here to switch to the map view.
The map label for this gene is 41409315
Identifier: 41409315
GI number: 41409315
Start: 3568820
End: 3569971
Strand: Reverse
Name: 41409315
Synonym: MAP3217c
Alternate gene names: NA
Gene position: 3569971-3568820 (Counterclockwise)
Preceding gene: 41409316
Following gene: 41409313
Centisome position: 73.92
GC content: 72.66
Gene sequence:
>1152_bases GTGGCAGCTGATCGCCTTCGCCGCGCCGCTGCTCGGGGTGCTGGGCACGATCAGCTGGCAGCCACGGGTGCCGGCGGTCG CCCTGCACGCCGAACCCGACACGCAGCGCTGCTTCGAGGGCGAGGCGGCGCACGTGACGGTGTGGGGGATCGAAGAGCAG GGCCCGTGCGCGGTCCGGCTGACGGTTCCGCCCGTCGAGGGAATGGAACTGCAGGTGGCGAATCCGGTTCGGGCCACGGC AAAACCGTGCGGGCCACCGCGCAGCGCTGGGGCCGCTACCACGTCGCGGCGCGGGTGGACGTGCTGGCCCGCGGCGGGTT GTTGAGCGGGACCGCGCTGGTGGACGCCGCCGAGGTGATCGTGTTTCCGCTGACGCCGCCGCAGCCGACGCCGATCCCGC GCACCGAGCTGCTGGATCGGCTGGGCGCCCACCTGACCCGGCATGTCGGGCCCGGCGTGGAATACGCCGACATACGCCCC TATGTGCCCGGAGACCAACTGCGCGCAGTGAATTGGGCGGTGAGCGCGCGCCGCCGCCAGCTGCACGTCACCCAGCGGCT GACCGACCGCGCGGCCGACGTGGTGGTGCTGATCGACGGATACCGGCAGCCGGCGGGTCCGGCGACGCTGGCCACTGAGC GGATCGTGCGGGGCGCGGCGCAGGTGGTGCAAACCGCGCTGCGGCACGGTGATCGGGCCGGGATCGTCGCCCTGGGCGGC AACCGCCCGCGATGGCTCGGCGCCGATATCGGGCAGCGCCAGTTCTACCGGGTGCTCGACACCGTGCTGGCCGCCGGCGC CGGATTCGAGCACACCACCGGCACCTTGGCGCCGCGCGCGGCGGTTCCCGCCGGGGCCATCGTCATCGCGTTCTCCACCC TGCTCGACACCGAATTCGCCCTCGCCCTCATCGATCTGCGCCGGCGCGGCCACGTCGTGCTGGCGGTCGACATCCTCGAG GGTTCGCCGTTCGAGGACGAACAGGATCCGCTGGTGGATCGGATGTGGGCGCTGCAGCGCTCGGCGATGTACCGCGACAT GGCCACCGTCGGCGTGGACATCGTGTGGTGGCCGGGGGACCGCGGTTTGGAACAGTCGATGGGTGTACTGCCCGATCGCC GCCGCCGGGTCCGGGGGAGGCTGCGTGGATAG
Upstream 100 bases:
>100_bases CACCCCGTGCAGCCGAGTTCCGCTGGCGCGCTTCGGAATTGACGCGGGCGATGGCCACCTGCGCGGCGTTCGCGTTGGCC GCGGCCGTGATCGGCGCCCG
Downstream 100 bases:
>100_bases CGGCCGAACCAATCTGCCGGCGCGGGTGGGCGCGCCCGGGTTCGGTCTGCTCATGGTGGGATTGGCCGCCGGCGGCCGGC CGGAATCGGCGGCCGTCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 383; Mature: 382
Protein sequence:
>383_residues MAADRLRRAAARGAGHDQLAATGAGGRPARRTRHAALLRGRGGARDGVGDRRAGPVRGPADGSARRGNGTAGGESGSGHG KTVRATAQRWGRYHVAARVDVLARGGLLSGTALVDAAEVIVFPLTPPQPTPIPRTELLDRLGAHLTRHVGPGVEYADIRP YVPGDQLRAVNWAVSARRRQLHVTQRLTDRAADVVVLIDGYRQPAGPATLATERIVRGAAQVVQTALRHGDRAGIVALGG NRPRWLGADIGQRQFYRVLDTVLAAGAGFEHTTGTLAPRAAVPAGAIVIAFSTLLDTEFALALIDLRRRGHVVLAVDILE GSPFEDEQDPLVDRMWALQRSAMYRDMATVGVDIVWWPGDRGLEQSMGVLPDRRRRVRGRLRG
Sequences:
>Translated_383_residues MAADRLRRAAARGAGHDQLAATGAGGRPARRTRHAALLRGRGGARDGVGDRRAGPVRGPADGSARRGNGTAGGESGSGHG KTVRATAQRWGRYHVAARVDVLARGGLLSGTALVDAAEVIVFPLTPPQPTPIPRTELLDRLGAHLTRHVGPGVEYADIRP YVPGDQLRAVNWAVSARRRQLHVTQRLTDRAADVVVLIDGYRQPAGPATLATERIVRGAAQVVQTALRHGDRAGIVALGG NRPRWLGADIGQRQFYRVLDTVLAAGAGFEHTTGTLAPRAAVPAGAIVIAFSTLLDTEFALALIDLRRRGHVVLAVDILE GSPFEDEQDPLVDRMWALQRSAMYRDMATVGVDIVWWPGDRGLEQSMGVLPDRRRRVRGRLRG >Mature_382_residues AADRLRRAAARGAGHDQLAATGAGGRPARRTRHAALLRGRGGARDGVGDRRAGPVRGPADGSARRGNGTAGGESGSGHGK TVRATAQRWGRYHVAARVDVLARGGLLSGTALVDAAEVIVFPLTPPQPTPIPRTELLDRLGAHLTRHVGPGVEYADIRPY VPGDQLRAVNWAVSARRRQLHVTQRLTDRAADVVVLIDGYRQPAGPATLATERIVRGAAQVVQTALRHGDRAGIVALGGN RPRWLGADIGQRQFYRVLDTVLAAGAGFEHTTGTLAPRAAVPAGAIVIAFSTLLDTEFALALIDLRRRGHVVLAVDILEG SPFEDEQDPLVDRMWALQRSAMYRDMATVGVDIVWWPGDRGLEQSMGVLPDRRRRVRGRLRG
Specific function: Unknown
COG id: COG1721
COG function: function code R; Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41017; Mature: 40886
Theoretical pI: Translated: 11.91; Mature: 11.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAADRLRRAAARGAGHDQLAATGAGGRPARRTRHAALLRGRGGARDGVGDRRAGPVRGPA CCHHHHHHHHHCCCCCCHHEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC DGSARRGNGTAGGESGSGHGKTVRATAQRWGRYHVAARVDVLARGGLLSGTALVDAAEVI CCCCCCCCCCCCCCCCCCCCCEEEHHHHHCCCEEEHHHHHHHHCCCCCCCHHHHCEEEEE VFPLTPPQPTPIPRTELLDRLGAHLTRHVGPGVEYADIRPYVPGDQLRAVNWAVSARRRQ EEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH LHVTQRLTDRAADVVVLIDGYRQPAGPATLATERIVRGAAQVVQTALRHGDRAGIVALGG HHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECC NRPRWLGADIGQRQFYRVLDTVLAAGAGFEHTTGTLAPRAAVPAGAIVIAFSTLLDTEFA CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH LALIDLRRRGHVVLAVDILEGSPFEDEQDPLVDRMWALQRSAMYRDMATVGVDIVWWPGD HHHHHHHCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCEEEEEECCC RGLEQSMGVLPDRRRRVRGRLRG CCHHHHHCCCCHHHHHHHHCCCC >Mature Secondary Structure AADRLRRAAARGAGHDQLAATGAGGRPARRTRHAALLRGRGGARDGVGDRRAGPVRGPA CHHHHHHHHHCCCCCCHHEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC DGSARRGNGTAGGESGSGHGKTVRATAQRWGRYHVAARVDVLARGGLLSGTALVDAAEVI CCCCCCCCCCCCCCCCCCCCCEEEHHHHHCCCEEEHHHHHHHHCCCCCCCHHHHCEEEEE VFPLTPPQPTPIPRTELLDRLGAHLTRHVGPGVEYADIRPYVPGDQLRAVNWAVSARRRQ EEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH LHVTQRLTDRAADVVVLIDGYRQPAGPATLATERIVRGAAQVVQTALRHGDRAGIVALGG HHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECC NRPRWLGADIGQRQFYRVLDTVLAAGAGFEHTTGTLAPRAAVPAGAIVIAFSTLLDTEFA CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH LALIDLRRRGHVVLAVDILEGSPFEDEQDPLVDRMWALQRSAMYRDMATVGVDIVWWPGD HHHHHHHCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCEEEEEECCC RGLEQSMGVLPDRRRRVRGRLRG CCHHHHHCCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA