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The map label for this gene is 41409313

Identifier: 41409313

GI number: 41409313

Start: 3566717

End: 3567409

Strand: Reverse

Name: 41409313

Synonym: MAP3215c

Alternate gene names: NA

Gene position: 3567409-3566717 (Counterclockwise)

Preceding gene: 41409315

Following gene: 41409284

Centisome position: 73.86

GC content: 66.81

Gene sequence:

>693_bases
ATGACCACGACAGATCCCGACGATCTCACCGCCCGCGCCCGCATCAGGCACGCGGCGCTGCGCGAGTTCGGCGAAAAGGG
ATACGAAGGGGCGACCATTCGTAGCATCGCCGCGGCGGCAGGGGTGTCGTCCGGGCTGCTGCGGCACCACTTCGGCTCCA
AGCAGGAGCTTCGTCAAGCCTGCGACGACTACCTCGTCAAAACCATGCGCGACCTCAACGCCCAGGTGCAGGACAACGCC
AAACGTGGTGACGTGCACTACGTTTCAGCCCGTATTCCCCTCGGCCAACACCAGGACTACATCACCCGCGCCCTGGTTGA
GGGCGGCGCCGGTGAGTTGTTCGACGCGCTGGTGTCGATGACCGAGGAATGGCTTGCCTCGGCCGATGAACATCGGGCCG
AGCCCGCCGATGTCGACGCCAAGTCGCGCGCCACCCTCATCACCGCGATGGCTCTTGCCATACCGCTGCTGCGGCAACAC
ATCTCGCGCGGCCTGGGCGTGGACATCAGCACAGAGCAGGGCGATCTGCGGGTCGCGGCCATCCTGGTCGACATCTATTC
GAATCCGCTGCTGACGCCCGAGCAGGCCAAGTCTGCCCGCGACGACCTCGCCGGCCGACTCAGTGCAGCAGCTGGGCCGC
CTGGTCGGCCAGGTCGAGCAGCGGCTGCGGGAAGACGCCCAGCGCCACGGTGA

Upstream 100 bases:

>100_bases
TGGCGCTGGTGTCAATTCCCATATCCGTGCCTCCCTGAACTCCGGTTTGCCCCGACTATACATCTGTGTAGTTTATTGTC
CAATCGTATAGTCTGACGCA

Downstream 100 bases:

>100_bases
CCGCGGCGCACACCGCGATCGCGGCCTTGCTCAAGATGCCCGGCGCCACCACGTGCGGGGTATCCTCGGTGGCCTCGGTG
AAGAACATCGACACGATCAC

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Transcriptional Regulatory Protein; HTH-Type Transcriptional Regulator; Regulatory Protein TetR; Tetr Family Transcriptional Regulator

Number of amino acids: Translated: 230; Mature: 229

Protein sequence:

>230_residues
MTTTDPDDLTARARIRHAALREFGEKGYEGATIRSIAAAAGVSSGLLRHHFGSKQELRQACDDYLVKTMRDLNAQVQDNA
KRGDVHYVSARIPLGQHQDYITRALVEGGAGELFDALVSMTEEWLASADEHRAEPADVDAKSRATLITAMALAIPLLRQH
ISRGLGVDISTEQGDLRVAAILVDIYSNPLLTPEQAKSARDDLAGRLSAAAGPPGRPGRAAAAGRRPAPR

Sequences:

>Translated_230_residues
MTTTDPDDLTARARIRHAALREFGEKGYEGATIRSIAAAAGVSSGLLRHHFGSKQELRQACDDYLVKTMRDLNAQVQDNA
KRGDVHYVSARIPLGQHQDYITRALVEGGAGELFDALVSMTEEWLASADEHRAEPADVDAKSRATLITAMALAIPLLRQH
ISRGLGVDISTEQGDLRVAAILVDIYSNPLLTPEQAKSARDDLAGRLSAAAGPPGRPGRAAAAGRRPAPR
>Mature_229_residues
TTTDPDDLTARARIRHAALREFGEKGYEGATIRSIAAAAGVSSGLLRHHFGSKQELRQACDDYLVKTMRDLNAQVQDNAK
RGDVHYVSARIPLGQHQDYITRALVEGGAGELFDALVSMTEEWLASADEHRAEPADVDAKSRATLITAMALAIPLLRQHI
SRGLGVDISTEQGDLRVAAILVDIYSNPLLTPEQAKSARDDLAGRLSAAAGPPGRPGRAAAAGRRPAPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24664; Mature: 24533

Theoretical pI: Translated: 7.24; Mature: 7.24

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTTDPDDLTARARIRHAALREFGEKGYEGATIRSIAAAAGVSSGLLRHHFGSKQELRQA
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
CDDYLVKTMRDLNAQVQDNAKRGDVHYVSARIPLGQHQDYITRALVEGGAGELFDALVSM
HHHHHHHHHHHHCCHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHH
TEEWLASADEHRAEPADVDAKSRATLITAMALAIPLLRQHISRGLGVDISTEQGDLRVAA
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHH
ILVDIYSNPLLTPEQAKSARDDLAGRLSAAAGPPGRPGRAAAAGRRPAPR
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TTTDPDDLTARARIRHAALREFGEKGYEGATIRSIAAAAGVSSGLLRHHFGSKQELRQA
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
CDDYLVKTMRDLNAQVQDNAKRGDVHYVSARIPLGQHQDYITRALVEGGAGELFDALVSM
HHHHHHHHHHHHCCHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHH
TEEWLASADEHRAEPADVDAKSRATLITAMALAIPLLRQHISRGLGVDISTEQGDLRVAA
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHH
ILVDIYSNPLLTPEQAKSARDDLAGRLSAAAGPPGRPGRAAAAGRRPAPR
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA