Click here to switch to the map view.

The map label for this gene is nuoJ

Identifier: 41409308

GI number: 41409308

Start: 3560628

End: 3561452

Strand: Direct

Name: nuoJ

Synonym: MAP3210

Alternate gene names: 41409308

Gene position: 3560628-3561452 (Clockwise)

Preceding gene: 41409307

Following gene: 41409309

Centisome position: 73.72

GC content: 69.21

Gene sequence:

>825_bases
GTGAGTGCCTTCGCCGGCCACGCCGTCGCCGCCACGCTGGCCTCCAGCTATTCCCAGGACACCATCGTCCGCACATCCAC
CGGCGAGGCAGTGACGTTCTGGGTGCTGGGCGCGCTGGCCGTGATCGGTGCGCTCGGGGTGGTGCTGGCCGTCAACGCCG
TCTACTCGGCCATGTTCCTGGCCATGACGATGATCATCCTGGCGGTGTTCTACATGATCCAGGACGCGCTGTTTTTGGGC
GTCGTCCAGGTCGTGGTCTACACCGGCGCGGTGATGATGCTGTTCCTGTTCGTGCTGATGCTCATCGGCGTCGACTCGGC
CGAATCGCTCAGGGAGACGCTGCGCGGCCAGCGCGTCGCCGCGGTGGCCGCCGGTGTCGGGTTCGGCATCCTGCTCATCG
CCGCGGTCGGCAACGTGGCCAGCGGCGGGTTCGCCGGGCTGACCACCGCCAACGCCAACGGCAACGTGGAAGGGCTTGCC
GCCCTGATCTTTTCCCGCTACCTGTGGGCCTTCGAGCTGACCAGCGCGCTGCTGATCACCGCGGCCGTCGGGGCCATGGT
GCTGGCGCACCGGGAGCGTTTCGAGCGCCGCAAGACCCAGCGCGAACTGTCCCAGGAGCGTTTCCGGGCCGGCGGGCACC
CCACCCCGCTGCCCAACCCCGGTGTCTACGCCCGCCACAACGCCGTCGACGTGGCCGCCCTGTTGCCGGACGGCTCGTAT
TCGAAGCTGTCGGTGTCGCCCATCCTGCAAAGCCGCGGCGGCGACGGCAAGGACGTCGCCGCACCGGAGCCCAGCCCGAG
TCTGTCGCAAGGCGGTGCGTCGTGA

Upstream 100 bases:

>100_bases
CGCCGCATCCCCGCGCCCCCGGCGCCACCGATAAGGACTACTACCTGGGCAATGTGACCGCGCACGGGCTGCGGGAGGCC
CAGCGGGCCGGGGAGCCGCG

Downstream 100 bases:

>100_bases
ATCCCATCAACTACCTGTATCTCTCGGCGCTGCTGTTCACCATCGGGGCGGCCGGTGTGTTGTTGCGCCGCAACGCCATC
GTGATGTTCATGTGCGTCGA

Product: NADH dehydrogenase subunit J

Products: NA

Alternate protein names: NADH dehydrogenase I subunit J; NDH-1 subunit J [H]

Number of amino acids: Translated: 274; Mature: 273

Protein sequence:

>274_residues
MSAFAGHAVAATLASSYSQDTIVRTSTGEAVTFWVLGALAVIGALGVVLAVNAVYSAMFLAMTMIILAVFYMIQDALFLG
VVQVVVYTGAVMMLFLFVLMLIGVDSAESLRETLRGQRVAAVAAGVGFGILLIAAVGNVASGGFAGLTTANANGNVEGLA
ALIFSRYLWAFELTSALLITAAVGAMVLAHRERFERRKTQRELSQERFRAGGHPTPLPNPGVYARHNAVDVAALLPDGSY
SKLSVSPILQSRGGDGKDVAAPEPSPSLSQGGAS

Sequences:

>Translated_274_residues
MSAFAGHAVAATLASSYSQDTIVRTSTGEAVTFWVLGALAVIGALGVVLAVNAVYSAMFLAMTMIILAVFYMIQDALFLG
VVQVVVYTGAVMMLFLFVLMLIGVDSAESLRETLRGQRVAAVAAGVGFGILLIAAVGNVASGGFAGLTTANANGNVEGLA
ALIFSRYLWAFELTSALLITAAVGAMVLAHRERFERRKTQRELSQERFRAGGHPTPLPNPGVYARHNAVDVAALLPDGSY
SKLSVSPILQSRGGDGKDVAAPEPSPSLSQGGAS
>Mature_273_residues
SAFAGHAVAATLASSYSQDTIVRTSTGEAVTFWVLGALAVIGALGVVLAVNAVYSAMFLAMTMIILAVFYMIQDALFLGV
VQVVVYTGAVMMLFLFVLMLIGVDSAESLRETLRGQRVAAVAAGVGFGILLIAAVGNVASGGFAGLTTANANGNVEGLAA
LIFSRYLWAFELTSALLITAAVGAMVLAHRERFERRKTQRELSQERFRAGGHPTPLPNPGVYARHNAVDVAALLPDGSYS
KLSVSPILQSRGGDGKDVAAPEPSPSLSQGGAS

Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cyto

COG id: COG0839

COG function: function code C; NADH:ubiquinone oxidoreductase subunit 6 (chain J)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the complex I subunit 6 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001457 [H]

Pfam domain/function: PF00499 Oxidored_q3 [H]

EC number: =1.6.99.5 [H]

Molecular weight: Translated: 28449; Mature: 28318

Theoretical pI: Translated: 7.82; Mature: 7.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAFAGHAVAATLASSYSQDTIVRTSTGEAVTFWVLGALAVIGALGVVLAVNAVYSAMFL
CCCCHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMTMIILAVFYMIQDALFLGVVQVVVYTGAVMMLFLFVLMLIGVDSAESLRETLRGQRVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHH
AVAAGVGFGILLIAAVGNVASGGFAGLTTANANGNVEGLAALIFSRYLWAFELTSALLIT
HHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AAVGAMVLAHRERFERRKTQRELSQERFRAGGHPTPLPNPGVYARHNAVDVAALLPDGSY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCEEEEECCCCCC
SKLSVSPILQSRGGDGKDVAAPEPSPSLSQGGAS
CCEEHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SAFAGHAVAATLASSYSQDTIVRTSTGEAVTFWVLGALAVIGALGVVLAVNAVYSAMFL
CCCHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMTMIILAVFYMIQDALFLGVVQVVVYTGAVMMLFLFVLMLIGVDSAESLRETLRGQRVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHH
AVAAGVGFGILLIAAVGNVASGGFAGLTTANANGNVEGLAALIFSRYLWAFELTSALLIT
HHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AAVGAMVLAHRERFERRKTQRELSQERFRAGGHPTPLPNPGVYARHNAVDVAALLPDGSY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCEEEEECCCCCC
SKLSVSPILQSRGGDGKDVAAPEPSPSLSQGGAS
CCEEHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]