| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is fgd1 [H]
Identifier: 41409218
GI number: 41409218
Start: 3470894
End: 3471850
Strand: Reverse
Name: fgd1 [H]
Synonym: MAP3120c
Alternate gene names: 41409218
Gene position: 3471850-3470894 (Counterclockwise)
Preceding gene: 41409221
Following gene: 41409214
Centisome position: 71.88
GC content: 70.53
Gene sequence:
>957_bases ATGACCAAGATCGGATACTTTCTTTCCTGCGAGCAGTTCGGGCCGAAGGAACTCGTCGACCAGGCCAAGCGGGCGCAGGA CGCCGGGTTCGAGGCGCTGTGGATCTCCGACCACTTCCATCCCTGGAACGACGAGCAGGGCCAGAGCCCGTTCGTGTGGT CGGTGATCGGCGCGCTCTCCGAGGCGACGTCGCTGCCGGTCAGCACCGCCGTCACCTGCCCGACCATCCGGATACACCCG GCGATCATCGCGCAGGCGGCGGCCACCGCGGCCGTGCAGCTGCAGGGCCGGTTCGTGCTGGGGGTGGGCAGCGGCGAGGC CCTCAACGAGCACATCCTGGGCGATCCCTGGCCGTCCGCCGGGGTCCGGCTTCAGATGCTCGAGGAGGCCGTCGAGGTCA TCCGCAAGCTGCACCAGGGCGGCGAGGTGAGCCACCACGGCAAGCACTACGAGGTGCAGGAAGCCCGGATCTACACCCGG CCCGAGCAGCCGGTGCCCATCTACGGCTCGGCGTTCGGGCCGCAGGCGGTGCGGCTGGCCGCCCGGATCGGCGACGGATA CAGCATCTCCATGCCCGACGGCGAGCTGGTCAAACAGTTCCGGGAGGCCGGCGGCGGCGACAAGCCGGTGCAGGGCGGCA CCAAGGTGTGCTGGGACGCCGACGCCGACGCCGCGCTGAAAACCGCGCACCGGCTGTGGGGCAACGAGGGGCTGCCCGGC CAGACGTCCCAAATCCTGCCCCGCCCCAAGGATTTCGCCGCGCTGATGCCGCTGGTGCCGCCGGACACCGTCGCCCAGAG CGTCGCCTGCGGGCCCGACCCCGACCGGCACATCGCCCAGTTGCGCCGCTACATCGACGCCGACATCGACGAGGTCTACG TGCAGCAGATCGGCCCGGACATGGACGGGTTCTTCGCGGCCTGGGAGCAGGCCGTGCTGCCCGCGGTCCGCAACTAG
Upstream 100 bases:
>100_bases CTCTCGGTTATCGAGAACTGTCTTCTCCCGAATTGGCCGGCGTGTTCTCGCGGGTGCTGCCTAATGCTTAAGCGACCGCC GAGCGGGTAGCCGGGGCGCC
Downstream 100 bases:
>100_bases CGGCCGCGGCTCAGCTCGCCGATGCGCACCGCTCCAGCCGGAAGGTGCGTTCGAAGCCGGCCGGCTGCGTCGTCAACGTC ACCTCCACCGCACCGCTGGG
Product: hypothetical protein
Products: NA
Alternate protein names: F420_G6P_DH [H]
Number of amino acids: Translated: 318; Mature: 317
Protein sequence:
>318_residues MTKIGYFLSCEQFGPKELVDQAKRAQDAGFEALWISDHFHPWNDEQGQSPFVWSVIGALSEATSLPVSTAVTCPTIRIHP AIIAQAAATAAVQLQGRFVLGVGSGEALNEHILGDPWPSAGVRLQMLEEAVEVIRKLHQGGEVSHHGKHYEVQEARIYTR PEQPVPIYGSAFGPQAVRLAARIGDGYSISMPDGELVKQFREAGGGDKPVQGGTKVCWDADADAALKTAHRLWGNEGLPG QTSQILPRPKDFAALMPLVPPDTVAQSVACGPDPDRHIAQLRRYIDADIDEVYVQQIGPDMDGFFAAWEQAVLPAVRN
Sequences:
>Translated_318_residues MTKIGYFLSCEQFGPKELVDQAKRAQDAGFEALWISDHFHPWNDEQGQSPFVWSVIGALSEATSLPVSTAVTCPTIRIHP AIIAQAAATAAVQLQGRFVLGVGSGEALNEHILGDPWPSAGVRLQMLEEAVEVIRKLHQGGEVSHHGKHYEVQEARIYTR PEQPVPIYGSAFGPQAVRLAARIGDGYSISMPDGELVKQFREAGGGDKPVQGGTKVCWDADADAALKTAHRLWGNEGLPG QTSQILPRPKDFAALMPLVPPDTVAQSVACGPDPDRHIAQLRRYIDADIDEVYVQQIGPDMDGFFAAWEQAVLPAVRN >Mature_317_residues TKIGYFLSCEQFGPKELVDQAKRAQDAGFEALWISDHFHPWNDEQGQSPFVWSVIGALSEATSLPVSTAVTCPTIRIHPA IIAQAAATAAVQLQGRFVLGVGSGEALNEHILGDPWPSAGVRLQMLEEAVEVIRKLHQGGEVSHHGKHYEVQEARIYTRP EQPVPIYGSAFGPQAVRLAARIGDGYSISMPDGELVKQFREAGGGDKPVQGGTKVCWDADADAALKTAHRLWGNEGLPGQ TSQILPRPKDFAALMPLVPPDTVAQSVACGPDPDRHIAQLRRYIDADIDEVYVQQIGPDMDGFFAAWEQAVLPAVRN
Specific function: Involved in the bioreductive activation of the prodrug PA-824 (nitroimidazo-oxazine) developed for anti-tuberculosis therapy against both replicating and persistent bacteria. It does not interact directly with PA-824 but, rather, provides reduced F420 to
COG id: COG2141
COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the F420-dependent glucose-6-phosphate dehydrogenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019945 - InterPro: IPR019944 - InterPro: IPR011251 - InterPro: IPR016048 [H]
Pfam domain/function: PF00296 Bac_luciferase [H]
EC number: =1.1.99.34 [H]
Molecular weight: Translated: 34500; Mature: 34369
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKIGYFLSCEQFGPKELVDQAKRAQDAGFEALWISDHFHPWNDEQGQSPFVWSVIGALS CCCCCEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHH EATSLPVSTAVTCPTIRIHPAIIAQAAATAAVQLQGRFVLGVGSGEALNEHILGDPWPSA HHHCCCCCCEEECCEEEECHHHHHHHHHHHEEEECCEEEEEECCCCHHHHCCCCCCCCCC GVRLQMLEEAVEVIRKLHQGGEVSHHGKHYEVQEARIYTRPEQPVPIYGSAFGPQAVRLA CHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHEEEECCCCCCCCCCCCCCHHHHHHH ARIGDGYSISMPDGELVKQFREAGGGDKPVQGGTKVCWDADADAALKTAHRLWGNEGLPG HHCCCCEEEECCCHHHHHHHHHCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCC QTSQILPRPKDFAALMPLVPPDTVAQSVACGPDPDRHIAQLRRYIDADIDEVYVQQIGPD CCHHCCCCCHHHHHHCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCC MDGFFAAWEQAVLPAVRN HHHHHHHHHHHHHHHCCC >Mature Secondary Structure TKIGYFLSCEQFGPKELVDQAKRAQDAGFEALWISDHFHPWNDEQGQSPFVWSVIGALS CCCCEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHH EATSLPVSTAVTCPTIRIHPAIIAQAAATAAVQLQGRFVLGVGSGEALNEHILGDPWPSA HHHCCCCCCEEECCEEEECHHHHHHHHHHHEEEECCEEEEEECCCCHHHHCCCCCCCCCC GVRLQMLEEAVEVIRKLHQGGEVSHHGKHYEVQEARIYTRPEQPVPIYGSAFGPQAVRLA CHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHEEEECCCCCCCCCCCCCCHHHHHHH ARIGDGYSISMPDGELVKQFREAGGGDKPVQGGTKVCWDADADAALKTAHRLWGNEGLPG HHCCCCEEEECCCHHHHHHHHHCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCC QTSQILPRPKDFAALMPLVPPDTVAQSVACGPDPDRHIAQLRRYIDADIDEVYVQQIGPD CCHHCCCCCHHHHHHCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCC MDGFFAAWEQAVLPAVRN HHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]