Click here to switch to the map view.

The map label for this gene is 41409212

Identifier: 41409212

GI number: 41409212

Start: 3462023

End: 3462388

Strand: Direct

Name: 41409212

Synonym: MAP3114

Alternate gene names: NA

Gene position: 3462023-3462388 (Clockwise)

Preceding gene: 41409207

Following gene: 41409215

Centisome position: 71.68

GC content: 71.86

Gene sequence:

>366_bases
GTGTCGGACGGGCCGCTGCGCATCGAGTACTGCGACGGCTGCGCGCGCTGGGTGCATCCGGCCAGCGGCCGATGCCGCGA
CTGCGGCGGCGCGTTGGTGGCCCGCGAGGTCTGCGGGCGCGGCACGGTGTTCACCTACACCGTCAACCATCACCCCTACA
ACCCGGAGATCCCTACCCCGTATGTGATCGCCATCGTCGAGCTCGCCGAGCAGAGCGATCTGCGTGTGGCCGCCAATATC
GTTGACTGCGAACCGGATTCGGTGGCCTGCGGGATGCCGGTGACGCTGCTGCCGGAGCGCGGCAGCGGTGGCGGCCCCGC
GGTTCGCCCCGGCCTGAGCCGCGAGCCGACGCGGCCCGGTCGCTAG

Upstream 100 bases:

>100_bases
ATGCCGGACAGGATCGCGTCCTTCTCGAAATGCGCCATGCACACCGCCCGTCAGACCACACCGTCGCCGCGTCGAACCAA
TTGAGTGTACTGTATTCGTC

Downstream 100 bases:

>100_bases
TTGATCAGCGGGTCGCGCGGCATGCCGAGGATCCGCTCGGCGATCTGATTGCGCGTCACCTCCGAGGTGCCGCCGGCGAT
CGCCATGCCGCGGGCCCCCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 121; Mature: 120

Protein sequence:

>121_residues
MSDGPLRIEYCDGCARWVHPASGRCRDCGGALVAREVCGRGTVFTYTVNHHPYNPEIPTPYVIAIVELAEQSDLRVAANI
VDCEPDSVACGMPVTLLPERGSGGGPAVRPGLSREPTRPGR

Sequences:

>Translated_121_residues
MSDGPLRIEYCDGCARWVHPASGRCRDCGGALVAREVCGRGTVFTYTVNHHPYNPEIPTPYVIAIVELAEQSDLRVAANI
VDCEPDSVACGMPVTLLPERGSGGGPAVRPGLSREPTRPGR
>Mature_120_residues
SDGPLRIEYCDGCARWVHPASGRCRDCGGALVAREVCGRGTVFTYTVNHHPYNPEIPTPYVIAIVELAEQSDLRVAANIV
DCEPDSVACGMPVTLLPERGSGGGPAVRPGLSREPTRPGR

Specific function: Unknown

COG id: COG1545

COG function: function code R; Predicted nucleic-acid-binding protein containing a Zn-ribbon

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12917; Mature: 12786

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
5.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDGPLRIEYCDGCARWVHPASGRCRDCGGALVAREVCGRGTVFTYTVNHHPYNPEIPTP
CCCCCEEEEEECCHHHHCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCC
YVIAIVELAEQSDLRVAANIVDCEPDSVACGMPVTLLPERGSGGGPAVRPGLSREPTRPG
CEEEEEECCCCCCCEEEEEEEECCCCCEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCC
R
C
>Mature Secondary Structure 
SDGPLRIEYCDGCARWVHPASGRCRDCGGALVAREVCGRGTVFTYTVNHHPYNPEIPTP
CCCCEEEEEECCHHHHCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCC
YVIAIVELAEQSDLRVAANIVDCEPDSVACGMPVTLLPERGSGGGPAVRPGLSREPTRPG
CEEEEEECCCCCCCEEEEEEEECCCCCEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCC
R
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA