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The map label for this gene is ctaD

Identifier: 41409189

GI number: 41409189

Start: 3438400

End: 3440145

Strand: Reverse

Name: ctaD

Synonym: MAP3091c

Alternate gene names: 41409189

Gene position: 3440145-3438400 (Counterclockwise)

Preceding gene: 41409192

Following gene: 41409188

Centisome position: 71.23

GC content: 64.72

Gene sequence:

>1746_bases
TTGACAGCCGAAGCGCCCCCCTTGGGAGAACTCGAGGCCGTTCGTCCGTACCCGGACCGCACCGGTCCCAAAGGGAACCT
CGTCTACAAACTGATCACGACGACCGATCACAAGATGATCGGCATCATGTACACCGTCACCTGCTTCGCGTTCTTCTTCA
TCGGCGGGCTGATGGCGTTGCTGATGCGCACCGAGCTGGCCGCGCCGGGGCTGCAGTTCCTGTCGAACGAGCAGTTCAAC
CAGCTGTTCACCATGCACGGCACGATCATGCTGCTGCTGTACGCCACCCCGGTGGTGTTCGGTTTCGCCAACCTGGTGCT
GCCGCTGCAGATCGGCGCGCCCGACGTGGCCTTCCCGCGGCTCAACGCCTTCTCGTTCTGGCTGTTCCTGTTCGGCGGGC
TGATCGCGGCGTCCGGCTTCATCGTGCCGGGCGGCGCCGCCGACTTCGGCTGGACCGCCTATACCCCGCTGTCTGACGCC
GTGCACTCGCCCGGCGCCGGGGGAGACCTGTGGATCACCGGCCTGATCGTCGCCGGTCTGGGCACCATCCTAGGTGCGGT
CAACATGATCACCACCGTGGTCTGCATGCGCGCGCCCGGCATGACGATGTTCCGGATGCCGATCTTCACCTGGAACATCC
TGGTGACCTCGATCCTGATCCTGATCGCCTTCCCGATCCTGACCGCGGCGCTGTTCGGGCTGGCCGCCGACCGCCATCTG
GGCGCCCATGTCTACGACGCCGCCAACGGCGGAGTTCTGTTGTGGCAGCACCTGTTCTGGTTCTTCGGCCATCCCGAGGT
GTACATCATCGCGTTGCCGTTCTTCGGGATCATCACCGAGATCATCCCGGTGTTCGCGCGCAAGCCGGTGTTCGGCTACA
CCACGCTGGTGTACGCGACGCTGTCGATCGCGGCGCTGTCGGTCGCGGTGTGGGCGCACCACATGTTCGCCACCGGAGCC
GTTCTGCTGCCGTTCTTTTCGTTCATGACGTACCTGATCGCGGTGCCGACCGGGATCAAGTTCTTCAACTGGATCGGCAC
GATGTGGAAAGGGCAGTTGACATTTGAGACGCCGATGCTGTTCTGCGTCGGCTTCCTGCTCACCTTCCTGCTGGGTGGTC
TGACCGGCGTGATGCTGGCCAGCCCGCCGCTGGACTTCCACGTCACCGACACCTATTTCGTGGTCGCGCACTTCCACTAC
GTGTTGTTCGGCACCATCGTGTTCGCCACCTTCGCGGGGGTTTACTTCTGGTTCCCGAAGATGACCGGCCGCCTGCTCGA
CGAGCGGCTGGGCAAGCTGCACTTCTGGTTGACGTTCATCGGGTTCCACACCACCTTCCTGGTGCAGCACTGGCTGGGCG
ATTTGGGCATGCCGCGCCGCTACGCCGACTACCTGCCCAGCGACGGCTTCCAGCCCTACAACGTCGCTTCCACGGTCGGG
GCGTTCATCCTGGGCGCGTCGATGTTCCCGTTCGTCTGGAACGTCTTCAAGAGCTGGCGCTACGGCGAGGTCGTCACCGT
CGACGACCCGTGGGGCTACGGCAACTCGCTGGAGTGGGCGACCAGCTGCCCGCCGCCGCGGCACAACTTCACCGAGCTGC
CCCGAATCCGTTCGGAGCGGCCAGCATTCGAGTTGCACTACCCGCACATGGTGGAACGGCTGCGCGCCGAGGCGCACGTG
GGTCGCGCGCACGGCCCGGCGGACAAGGACGTCACCCGGCTGGACGACGTCCAGGTTCGCAGCTGA

Upstream 100 bases:

>100_bases
AGTTTGTAGGACCAGCCCTGACGTCGTCATGATCGACGGCTAAGATTCGTTGGAATAGTGATGTTGGGCCAGTGTCCGAT
CCGGATGTTTGGAGAAGCTG

Downstream 100 bases:

>100_bases
TGGCCTGACGGGCGGCTGCCGGGCGTGAACTCACCACCCAAGGTGTCGGTGCTGATCACCGTCACCGGCGTGGACCAGCC
GGGCGTGACGGCGACCCTGT

Product: CtaD

Products: NA

Alternate protein names: Cytochrome aa3 subunit 1; Cytochrome c oxidase polypeptide I

Number of amino acids: Translated: 581; Mature: 580

Protein sequence:

>581_residues
MTAEAPPLGELEAVRPYPDRTGPKGNLVYKLITTTDHKMIGIMYTVTCFAFFFIGGLMALLMRTELAAPGLQFLSNEQFN
QLFTMHGTIMLLLYATPVVFGFANLVLPLQIGAPDVAFPRLNAFSFWLFLFGGLIAASGFIVPGGAADFGWTAYTPLSDA
VHSPGAGGDLWITGLIVAGLGTILGAVNMITTVVCMRAPGMTMFRMPIFTWNILVTSILILIAFPILTAALFGLAADRHL
GAHVYDAANGGVLLWQHLFWFFGHPEVYIIALPFFGIITEIIPVFARKPVFGYTTLVYATLSIAALSVAVWAHHMFATGA
VLLPFFSFMTYLIAVPTGIKFFNWIGTMWKGQLTFETPMLFCVGFLLTFLLGGLTGVMLASPPLDFHVTDTYFVVAHFHY
VLFGTIVFATFAGVYFWFPKMTGRLLDERLGKLHFWLTFIGFHTTFLVQHWLGDLGMPRRYADYLPSDGFQPYNVASTVG
AFILGASMFPFVWNVFKSWRYGEVVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSERPAFELHYPHMVERLRAEAHV
GRAHGPADKDVTRLDDVQVRS

Sequences:

>Translated_581_residues
MTAEAPPLGELEAVRPYPDRTGPKGNLVYKLITTTDHKMIGIMYTVTCFAFFFIGGLMALLMRTELAAPGLQFLSNEQFN
QLFTMHGTIMLLLYATPVVFGFANLVLPLQIGAPDVAFPRLNAFSFWLFLFGGLIAASGFIVPGGAADFGWTAYTPLSDA
VHSPGAGGDLWITGLIVAGLGTILGAVNMITTVVCMRAPGMTMFRMPIFTWNILVTSILILIAFPILTAALFGLAADRHL
GAHVYDAANGGVLLWQHLFWFFGHPEVYIIALPFFGIITEIIPVFARKPVFGYTTLVYATLSIAALSVAVWAHHMFATGA
VLLPFFSFMTYLIAVPTGIKFFNWIGTMWKGQLTFETPMLFCVGFLLTFLLGGLTGVMLASPPLDFHVTDTYFVVAHFHY
VLFGTIVFATFAGVYFWFPKMTGRLLDERLGKLHFWLTFIGFHTTFLVQHWLGDLGMPRRYADYLPSDGFQPYNVASTVG
AFILGASMFPFVWNVFKSWRYGEVVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSERPAFELHYPHMVERLRAEAHV
GRAHGPADKDVTRLDDVQVRS
>Mature_580_residues
TAEAPPLGELEAVRPYPDRTGPKGNLVYKLITTTDHKMIGIMYTVTCFAFFFIGGLMALLMRTELAAPGLQFLSNEQFNQ
LFTMHGTIMLLLYATPVVFGFANLVLPLQIGAPDVAFPRLNAFSFWLFLFGGLIAASGFIVPGGAADFGWTAYTPLSDAV
HSPGAGGDLWITGLIVAGLGTILGAVNMITTVVCMRAPGMTMFRMPIFTWNILVTSILILIAFPILTAALFGLAADRHLG
AHVYDAANGGVLLWQHLFWFFGHPEVYIIALPFFGIITEIIPVFARKPVFGYTTLVYATLSIAALSVAVWAHHMFATGAV
LLPFFSFMTYLIAVPTGIKFFNWIGTMWKGQLTFETPMLFCVGFLLTFLLGGLTGVMLASPPLDFHVTDTYFVVAHFHYV
LFGTIVFATFAGVYFWFPKMTGRLLDERLGKLHFWLTFIGFHTTFLVQHWLGDLGMPRRYADYLPSDGFQPYNVASTVGA
FILGASMFPFVWNVFKSWRYGEVVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSERPAFELHYPHMVERLRAEAHVG
RAHGPADKDVTRLDDVQVRS

Specific function: Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome

COG id: COG0843

COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 1

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the heme-copper respiratory oxidase family

Homologues:

Organism=Homo sapiens, GI251831109, Length=513, Percent_Identity=42.6900584795322, Blast_Score=369, Evalue=1e-102,
Organism=Escherichia coli, GI1786634, Length=546, Percent_Identity=42.8571428571429, Blast_Score=409, Evalue=1e-115,
Organism=Saccharomyces cerevisiae, GI6226519, Length=538, Percent_Identity=38.6617100371747, Blast_Score=357, Evalue=3e-99,
Organism=Saccharomyces cerevisiae, GI6226524, Length=325, Percent_Identity=40.3076923076923, Blast_Score=232, Evalue=1e-61,
Organism=Saccharomyces cerevisiae, GI6226523, Length=251, Percent_Identity=36.6533864541833, Blast_Score=145, Evalue=3e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): COX1_MYCPA (Q73VC3)

Other databases:

- EMBL:   AE016958
- RefSeq:   NP_962025.1
- ProteinModelPortal:   Q73VC3
- SMR:   Q73VC3
- EnsemblBacteria:   EBMYCT00000038432
- GeneID:   2718055
- GenomeReviews:   AE016958_GR
- KEGG:   mpa:MAP3091c
- NMPDR:   fig|262316.1.peg.3091
- GeneTree:   EBGT00050000016673
- HOGENOM:   HBG603668
- OMA:   GLSVTVW
- ProtClustDB:   CLSK2522300
- BRENDA:   1.9.3.1
- InterPro:   IPR000883
- InterPro:   IPR014241
- Gene3D:   G3DSA:1.20.210.10
- PANTHER:   PTHR10422
- PRINTS:   PR01165
- TIGRFAMs:   TIGR02891

Pfam domain/function: PF00115 COX1; SSF81442 COX1

EC number: =1.9.3.1

Molecular weight: Translated: 64577; Mature: 64446

Theoretical pI: Translated: 7.08; Mature: 7.08

Prosite motif: PS50855 COX1; PS00077 COX1_CUB

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xf8608b0)-; HASH(0x11cb001c)-; HASH(0x11da6a58)-; HASH(0x11bf86e4)-; HASH(0xfc893a4)-; HASH(0x119715a4)-; HASH(0x1160281c)-; HASH(0x113634f8)-; HASH(0x11f92ed4)-; HASH(0x12142690)-; HASH(0x1210d204)-; HASH(0x11acb4d8)-;

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAEAPPLGELEAVRPYPDRTGPKGNLVYKLITTTDHKMIGIMYTVTCFAFFFIGGLMAL
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
LMRTELAAPGLQFLSNEQFNQLFTMHGTIMLLLYATPVVFGFANLVLPLQIGAPDVAFPR
HHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCC
LNAFSFWLFLFGGLIAASGFIVPGGAADFGWTAYTPLSDAVHSPGAGGDLWITGLIVAGL
HHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHH
GTILGAVNMITTVVCMRAPGMTMFRMPIFTWNILVTSILILIAFPILTAALFGLAADRHL
HHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GAHVYDAANGGVLLWQHLFWFFGHPEVYIIALPFFGIITEIIPVFARKPVFGYTTLVYAT
CCEEEECCCCCCHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHCCCCCHHHHHHHHH
LSIAALSVAVWAHHMFATGAVLLPFFSFMTYLIAVPTGIKFFNWIGTMWKGQLTFETPML
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEECCHHH
FCVGFLLTFLLGGLTGVMLASPPLDFHVTDTYFVVAHFHYVLFGTIVFATFAGVYFWFPK
HHHHHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MTGRLLDERLGKLHFWLTFIGFHTTFLVQHWLGDLGMPRRYADYLPSDGFQPYNVASTVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCHHHHHHH
AFILGASMFPFVWNVFKSWRYGEVVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER
HHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCC
PAFELHYPHMVERLRAEAHVGRAHGPADKDVTRLDDVQVRS
CCEEECCHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCH
>Mature Secondary Structure 
TAEAPPLGELEAVRPYPDRTGPKGNLVYKLITTTDHKMIGIMYTVTCFAFFFIGGLMAL
CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
LMRTELAAPGLQFLSNEQFNQLFTMHGTIMLLLYATPVVFGFANLVLPLQIGAPDVAFPR
HHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCC
LNAFSFWLFLFGGLIAASGFIVPGGAADFGWTAYTPLSDAVHSPGAGGDLWITGLIVAGL
HHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHH
GTILGAVNMITTVVCMRAPGMTMFRMPIFTWNILVTSILILIAFPILTAALFGLAADRHL
HHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GAHVYDAANGGVLLWQHLFWFFGHPEVYIIALPFFGIITEIIPVFARKPVFGYTTLVYAT
CCEEEECCCCCCHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHCCCCCHHHHHHHHH
LSIAALSVAVWAHHMFATGAVLLPFFSFMTYLIAVPTGIKFFNWIGTMWKGQLTFETPML
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEECCHHH
FCVGFLLTFLLGGLTGVMLASPPLDFHVTDTYFVVAHFHYVLFGTIVFATFAGVYFWFPK
HHHHHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MTGRLLDERLGKLHFWLTFIGFHTTFLVQHWLGDLGMPRRYADYLPSDGFQPYNVASTVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCHHHHHHH
AFILGASMFPFVWNVFKSWRYGEVVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER
HHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCC
PAFELHYPHMVERLRAEAHVGRAHGPADKDVTRLDDVQVRS
CCEEECCHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA