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The map label for this gene is 41409161

Identifier: 41409161

GI number: 41409161

Start: 3407735

End: 3409339

Strand: Direct

Name: 41409161

Synonym: MAP3063

Alternate gene names: NA

Gene position: 3407735-3409339 (Clockwise)

Preceding gene: 41409160

Following gene: 41409162

Centisome position: 70.56

GC content: 73.02

Gene sequence:

>1605_bases
GTGAATTCCTCGCACGACCGGGTTCCCGGCCTGTTCACCCTGGTTTTGCACACCCACCTGCCGTGGCTGGCCCACCACGG
CCGCTGGCCGGTCGGCGAGGAATGGCTGTATCAATCCTGGGCGGCGGCCTACCTGCCGCTGCTGAGGGTGCTGGACACGC
TGGCCGGCGAAGACCGCCGGGGACTGCTCACGCTCGGCGTCACACCGGTGGTCAACGCGCAGCTCGACGACCCGTATTGC
CTTGACGGCATGCATCATTGGCTGGCCAACTGGCGGCTGCGCGCGATGGAAGCTGCCAGTGTGCGCTCGGCGCCCCGGTC
CAAGTCGGCCGGATACCAGGCGTGCACACCGGAAGCGTTGCGCGCCTTGGGAATTCGCGAATCGGCCGAGGCGGAACGAG
CCCTGGACGATTTCGCCACGCGGTGGCGGCACGGCGGCAGCCCGCTGCTGCGCCGACTGCTGGACGCCGGCACGGTCGAG
TTGCTGGGCGGCCCGCTGGCCCACCCGTTCCAGCCGCTGCTGGCACCGCGGCTGCGTGAGTTCGCGCTGCGCGAGGGGCT
GGCCGACGCGGCGTTGCGGCTCGGGGCGCGAAAAGGCCGGGGCCCCGGCGGGATCTGGGCGCCCGAATGCGCCTACGCGC
CCGGCCTCGAGCACGACTACGCCGCGGCCGGCGTCACCCATTTCATGGTCGACGGCCCGTCGCTGCACGGCGACACCGCG
CTGGGCCGGCCCGTCGGCGACACCGACGTGGTGGCGTTCGGGCGCGACCTGCAGGTCAGCTACCGGGTGTGGTCACCGAA
GTCCGGCTATCCCGGCCACCCGGCGTATCGCGACTTCCACACCTACGACCACCTCACCGGTCTCAAGCCGGCCCGGGTGA
CGGGCCGCAACGTGCCCTCGGAGAGCAAGGCGCCCTACGATCCGCAGCGCGCCGACCACGCGGTCGACCTGCACGTCGCC
GACTTCGTCGACGTGGTGCGCAACCGCCTGACCAGCGAGTCGGAGCGGATCGGGCGGCCGGCGCACGTGGTGGCCGCGTT
CGACACCGAGCTGTTCGGGCACTGGTGGTACGAGGGCCCGACGTGGTTGGCGCGGGTGCTGCGCGCCCTGCCCGAGGCCG
GGGTCCGGGTGGGCACCCTGCACGACGCGATCGCCGGCGGCTTCGTCGGCGACCCGGTGGACCTGCCGCCCAGCTCCTGG
GGGTCGGGCAAGGACTGGCAGGTGTGGGCCGGGGACCAGGTCGCCGACCTGGTCCAGCTCAACTCCGAGGTGGTCGACAC
CGCGCTGAGCACCGTCGACAAGGCCCTCTCACAAGCCGGGTCGCAGCCCGCCGCGCTGGACGGGCCGGTCCCCCGCGACC
GCGTGGCGGACCAGATCCTGCGCGAGACCCTGCTCACCGTCTCCAGCGACTGGCCGTTCATGGTGAGCAAGGACTCGGCC
GCCGACTACGCCCGCTACCGCGCCCACCTGCACGCACACGCCACCCGGGAGATCGCGGGCGCGCTGGCGTCCGGCCGGCG
CGACACCGCGCAGCGGCTGGCCGACGGGTGGAACCGCGCCGACGGGCTGTTCGGGGCGCTGGATGCGCGCAGGCTGCCGC
GATGA

Upstream 100 bases:

>100_bases
TCACCGTCGACGACTTCGAGCTGGTGCCCAGCGGCGCCGACGCCGCCTCCGGCCACCACATCGACGACAGCCTGGACCTG
ATCGCGATCGCGGTAGCACC

Downstream 100 bases:

>100_bases
GGAGGCGGGCCGTCGCATGAAGATCCTGATGGTGTCGTGGGAGTACCCGCCGGTGGTCATCGGCGGGCTGGGCCGGCACG
TGCATCACCTGTCCACCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: Glycoside Hydrolase Family Protein; Glycosyl Hydrolase Family; Glycosy Hydrolase Family Protein; Alpha-Amylase; (1-_4)-Alpha-D-Glucan Branching; Family; Glycogen Branching; Glycosyl Transferase/Glycoside Hydrolase-Like Protein; Glycosyl Hydrolase Family Protein

Number of amino acids: Translated: 534; Mature: 534

Protein sequence:

>534_residues
MNSSHDRVPGLFTLVLHTHLPWLAHHGRWPVGEEWLYQSWAAAYLPLLRVLDTLAGEDRRGLLTLGVTPVVNAQLDDPYC
LDGMHHWLANWRLRAMEAASVRSAPRSKSAGYQACTPEALRALGIRESAEAERALDDFATRWRHGGSPLLRRLLDAGTVE
LLGGPLAHPFQPLLAPRLREFALREGLADAALRLGARKGRGPGGIWAPECAYAPGLEHDYAAAGVTHFMVDGPSLHGDTA
LGRPVGDTDVVAFGRDLQVSYRVWSPKSGYPGHPAYRDFHTYDHLTGLKPARVTGRNVPSESKAPYDPQRADHAVDLHVA
DFVDVVRNRLTSESERIGRPAHVVAAFDTELFGHWWYEGPTWLARVLRALPEAGVRVGTLHDAIAGGFVGDPVDLPPSSW
GSGKDWQVWAGDQVADLVQLNSEVVDTALSTVDKALSQAGSQPAALDGPVPRDRVADQILRETLLTVSSDWPFMVSKDSA
ADYARYRAHLHAHATREIAGALASGRRDTAQRLADGWNRADGLFGALDARRLPR

Sequences:

>Translated_534_residues
MNSSHDRVPGLFTLVLHTHLPWLAHHGRWPVGEEWLYQSWAAAYLPLLRVLDTLAGEDRRGLLTLGVTPVVNAQLDDPYC
LDGMHHWLANWRLRAMEAASVRSAPRSKSAGYQACTPEALRALGIRESAEAERALDDFATRWRHGGSPLLRRLLDAGTVE
LLGGPLAHPFQPLLAPRLREFALREGLADAALRLGARKGRGPGGIWAPECAYAPGLEHDYAAAGVTHFMVDGPSLHGDTA
LGRPVGDTDVVAFGRDLQVSYRVWSPKSGYPGHPAYRDFHTYDHLTGLKPARVTGRNVPSESKAPYDPQRADHAVDLHVA
DFVDVVRNRLTSESERIGRPAHVVAAFDTELFGHWWYEGPTWLARVLRALPEAGVRVGTLHDAIAGGFVGDPVDLPPSSW
GSGKDWQVWAGDQVADLVQLNSEVVDTALSTVDKALSQAGSQPAALDGPVPRDRVADQILRETLLTVSSDWPFMVSKDSA
ADYARYRAHLHAHATREIAGALASGRRDTAQRLADGWNRADGLFGALDARRLPR
>Mature_534_residues
MNSSHDRVPGLFTLVLHTHLPWLAHHGRWPVGEEWLYQSWAAAYLPLLRVLDTLAGEDRRGLLTLGVTPVVNAQLDDPYC
LDGMHHWLANWRLRAMEAASVRSAPRSKSAGYQACTPEALRALGIRESAEAERALDDFATRWRHGGSPLLRRLLDAGTVE
LLGGPLAHPFQPLLAPRLREFALREGLADAALRLGARKGRGPGGIWAPECAYAPGLEHDYAAAGVTHFMVDGPSLHGDTA
LGRPVGDTDVVAFGRDLQVSYRVWSPKSGYPGHPAYRDFHTYDHLTGLKPARVTGRNVPSESKAPYDPQRADHAVDLHVA
DFVDVVRNRLTSESERIGRPAHVVAAFDTELFGHWWYEGPTWLARVLRALPEAGVRVGTLHDAIAGGFVGDPVDLPPSSW
GSGKDWQVWAGDQVADLVQLNSEVVDTALSTVDKALSQAGSQPAALDGPVPRDRVADQILRETLLTVSSDWPFMVSKDSA
ADYARYRAHLHAHATREIAGALASGRRDTAQRLADGWNRADGLFGALDARRLPR

Specific function: Unknown

COG id: COG1543

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58382; Mature: 58382

Theoretical pI: Translated: 6.86; Mature: 6.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSSHDRVPGLFTLVLHTHLPWLAHHGRWPVGEEWLYQSWAAAYLPLLRVLDTLAGEDRR
CCCCCCCCCHHHHHHHHHHCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GLLTLGVTPVVNAQLDDPYCLDGMHHWLANWRLRAMEAASVRSAPRSKSAGYQACTPEAL
CEEEECCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
RALGIRESAEAERALDDFATRWRHGGSPLLRRLLDAGTVELLGGPLAHPFQPLLAPRLRE
HHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHH
FALREGLADAALRLGARKGRGPGGIWAPECAYAPGLEHDYAAAGVTHFMVDGPSLHGDTA
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCHHEEEECCCCCCCCCC
LGRPVGDTDVVAFGRDLQVSYRVWSPKSGYPGHPAYRDFHTYDHLTGLKPARVTGRNVPS
CCCCCCCCCCEEECCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCC
ESKAPYDPQRADHAVDLHVADFVDVVRNRLTSESERIGRPAHVVAAFDTELFGHWWYEGP
CCCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCHHHHCCCCEEEEEEHHHHHHHHHCCCCH
TWLARVLRALPEAGVRVGTLHDAIAGGFVGDPVDLPPSSWGSGKDWQVWAGDQVADLVQL
HHHHHHHHHHHHCCCEEEHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHH
NSEVVDTALSTVDKALSQAGSQPAALDGPVPRDRVADQILRETLLTVSSDWPFMVSKDSA
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCH
ADYARYRAHLHAHATREIAGALASGRRDTAQRLADGWNRADGLFGALDARRLPR
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHCCHHHHHHHHCCCC
>Mature Secondary Structure
MNSSHDRVPGLFTLVLHTHLPWLAHHGRWPVGEEWLYQSWAAAYLPLLRVLDTLAGEDRR
CCCCCCCCCHHHHHHHHHHCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GLLTLGVTPVVNAQLDDPYCLDGMHHWLANWRLRAMEAASVRSAPRSKSAGYQACTPEAL
CEEEECCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
RALGIRESAEAERALDDFATRWRHGGSPLLRRLLDAGTVELLGGPLAHPFQPLLAPRLRE
HHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHH
FALREGLADAALRLGARKGRGPGGIWAPECAYAPGLEHDYAAAGVTHFMVDGPSLHGDTA
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCHHEEEECCCCCCCCCC
LGRPVGDTDVVAFGRDLQVSYRVWSPKSGYPGHPAYRDFHTYDHLTGLKPARVTGRNVPS
CCCCCCCCCCEEECCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCC
ESKAPYDPQRADHAVDLHVADFVDVVRNRLTSESERIGRPAHVVAAFDTELFGHWWYEGP
CCCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCHHHHCCCCEEEEEEHHHHHHHHHCCCCH
TWLARVLRALPEAGVRVGTLHDAIAGGFVGDPVDLPPSSWGSGKDWQVWAGDQVADLVQL
HHHHHHHHHHHHCCCEEEHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHH
NSEVVDTALSTVDKALSQAGSQPAALDGPVPRDRVADQILRETLLTVSSDWPFMVSKDSA
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCH
ADYARYRAHLHAHATREIAGALASGRRDTAQRLADGWNRADGLFGALDARRLPR
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA