| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is rrmA [C]
Identifier: 41409160
GI number: 41409160
Start: 3406914
End: 3407738
Strand: Direct
Name: rrmA [C]
Synonym: MAP3062
Alternate gene names: 41409160
Gene position: 3406914-3407738 (Clockwise)
Preceding gene: 41409154
Following gene: 41409161
Centisome position: 70.54
GC content: 70.91
Gene sequence:
>825_bases ATGAGCGCACTGGTTCCCGACGTTCCCCCGCACCCGCCCGCCGGCACCGCACCGGCCGGCGACGCGGTGATGATGCTGAC GGGCGAGCGCACCATCCCGGGCCTGGACATCGAAAACTACTGGTTCCGCCGCCACGAGGTGGTCTACCAGCGGCTCGCCC GGCATTGCGCGGGCCGCGACGTGCTCGAGGCCGGCTGCGGCGAGGGATACGGCGCGGACATGATCGCCGGCGTCGCCCGC CGCGTGATCGCCGTGGACTACGACGAGGCCGCCGTGGCCCACGTCCGCGGCCGCTACCCCCGGGTGGACGTCATGCAGGC CAACCTCGCGCAGCTGCCCTTGCCGGACTCGTCGGTCGATGTTGTGGTCAACTTCCAGGTGATCGAGCATCTGTGGGACC AAACACAATTCGTCGTCGAGTGCGCGCGGGTGCTGCGCCCGTCCGGGCTGCTCTTGATGTCCACGCCCAACCGGATCACC TTCTCGCCGGGCCGCGACACCCCGATCAACCCGTTCCACACCCGCGAACTCAACGCCGTCGAGCTCACCGAACTGCTTGT CGGCGGCGGATTCCGCGACGTGTCGATCAGCGGCCTGTTCCACGGCCCGCGGCTGCGCGAGATGGACGCCCGGCACGGCG GCTCGATCATCGACGCCCAGATCGCCCGCACGGTCGCCGACGACCCGTGGCCGCCGCAGCTGGCGGCCGACGTCGCCGCG GTCACCGTCGACGACTTCGAGCTGGTGCCCAGCGGCGCCGACGCCGCCTCCGGCCACCACATCGACGACAGCCTGGACCT GATCGCGATCGCGGTAGCACCGTGA
Upstream 100 bases:
>100_bases GGTAGGAGTGCAGGTTCCTGCAGCCCGTCCGCCGCTGCGCAGCGGGGCCAGACTTTCCCCGGTTCGCGAATCCGACACTT CGCGTTAGCCTGCCTATGCA
Downstream 100 bases:
>100_bases ATTCCTCGCACGACCGGGTTCCCGGCCTGTTCACCCTGGTTTTGCACACCCACCTGCCGTGGCTGGCCCACCACGGCCGC TGGCCGGTCGGCGAGGAATG
Product: hypothetical protein
Products: S-adenosyl-L-homocysteine +rRNA containing Nmethylguanine [C]
Alternate protein names: Methyltransferase; Glycosyl Transferase Family Protein; Glycosyltransferase; Glycosyl Transferase; Hexaprenyldihydroxybenzoate Methyltransferase; Methyltransferase And Glycosyltransferase; Methyltransferase Domain Family; Methyltransferase Family Protein; 3-Demethylubiquinone-9 3-O-Methyltransferase; Methyltransferase Domain Protein; Sam Dependent Methyltransferase; UbiE/COQ5 Methyltransferase Family Protein
Number of amino acids: Translated: 274; Mature: 273
Protein sequence:
>274_residues MSALVPDVPPHPPAGTAPAGDAVMMLTGERTIPGLDIENYWFRRHEVVYQRLARHCAGRDVLEAGCGEGYGADMIAGVAR RVIAVDYDEAAVAHVRGRYPRVDVMQANLAQLPLPDSSVDVVVNFQVIEHLWDQTQFVVECARVLRPSGLLLMSTPNRIT FSPGRDTPINPFHTRELNAVELTELLVGGGFRDVSISGLFHGPRLREMDARHGGSIIDAQIARTVADDPWPPQLAADVAA VTVDDFELVPSGADAASGHHIDDSLDLIAIAVAP
Sequences:
>Translated_274_residues MSALVPDVPPHPPAGTAPAGDAVMMLTGERTIPGLDIENYWFRRHEVVYQRLARHCAGRDVLEAGCGEGYGADMIAGVAR RVIAVDYDEAAVAHVRGRYPRVDVMQANLAQLPLPDSSVDVVVNFQVIEHLWDQTQFVVECARVLRPSGLLLMSTPNRIT FSPGRDTPINPFHTRELNAVELTELLVGGGFRDVSISGLFHGPRLREMDARHGGSIIDAQIARTVADDPWPPQLAADVAA VTVDDFELVPSGADAASGHHIDDSLDLIAIAVAP >Mature_273_residues SALVPDVPPHPPAGTAPAGDAVMMLTGERTIPGLDIENYWFRRHEVVYQRLARHCAGRDVLEAGCGEGYGADMIAGVARR VIAVDYDEAAVAHVRGRYPRVDVMQANLAQLPLPDSSVDVVVNFQVIEHLWDQTQFVVECARVLRPSGLLLMSTPNRITF SPGRDTPINPFHTRELNAVELTELLVGGGFRDVSISGLFHGPRLREMDARHGGSIIDAQIARTVADDPWPPQLAADVAAV TVDDFELVPSGADAASGHHIDDSLDLIAIAVAP
Specific function: Specifically Methylates The Guanosine In Position 745 Of 23s rRNA. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.1.1.51 [C]
Molecular weight: Translated: 29558; Mature: 29427
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSALVPDVPPHPPAGTAPAGDAVMMLTGERTIPGLDIENYWFRRHEVVYQRLARHCAGRD CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCH VLEAGCGEGYGADMIAGVARRVIAVDYDEAAVAHVRGRYPRVDVMQANLAQLPLPDSSVD HHHHCCCCCCCHHHHHHHHHHHEEECCCHHHHHHHHCCCCCEEEECCCHHHCCCCCCCCE VVVNFQVIEHLWDQTQFVVECARVLRPSGLLLMSTPNRITFSPGRDTPINPFHTRELNAV EEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEECCCCCCCCCCCCCCCCCHH ELTELLVGGGFRDVSISGLFHGPRLREMDARHGGSIIDAQIARTVADDPWPPQLAADVAA HHHHHHHCCCCCEEEEEEEECCCCHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHEEE VTVDDFELVPSGADAASGHHIDDSLDLIAIAVAP EEECCEEECCCCCCCCCCCCCCCCCCEEEEEECC >Mature Secondary Structure SALVPDVPPHPPAGTAPAGDAVMMLTGERTIPGLDIENYWFRRHEVVYQRLARHCAGRD CCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCH VLEAGCGEGYGADMIAGVARRVIAVDYDEAAVAHVRGRYPRVDVMQANLAQLPLPDSSVD HHHHCCCCCCCHHHHHHHHHHHEEECCCHHHHHHHHCCCCCEEEECCCHHHCCCCCCCCE VVVNFQVIEHLWDQTQFVVECARVLRPSGLLLMSTPNRITFSPGRDTPINPFHTRELNAV EEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEECCCCCCCCCCCCCCCCCHH ELTELLVGGGFRDVSISGLFHGPRLREMDARHGGSIIDAQIARTVADDPWPPQLAADVAA HHHHHHHCCCCCEEEEEEEECCCCHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHEEE VTVDDFELVPSGADAASGHHIDDSLDLIAIAVAP EEECCEEECCCCCCCCCCCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: Unidentified protein factor B [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: S-Adenosyl-L-methionine; rRNA [C]
Specific reaction: S-Adenosyl-L-methionine + rRNA = S-adenosyl-L-homocysteine +rRNA containing Nmethylguanine [C]
General reaction: Methyl group transfer [C]
Inhibitor: Mg2+; Unidentified protein factor A1 [C]
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA