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The map label for this gene is fixA

Identifier: 41409159

GI number: 41409159

Start: 3405895

End: 3406686

Strand: Reverse

Name: fixA

Synonym: MAP3061c

Alternate gene names: 41409159

Gene position: 3406686-3405895 (Counterclockwise)

Preceding gene: 41409164

Following gene: 41409158

Centisome position: 70.53

GC content: 68.31

Gene sequence:

>792_bases
ATGACGAACATCGTGGTCCTGATAAAGCAGGTCCCAGACACCTGGTCGGAGCGCAAGCTGACAGACGGCGACTGGACGCT
CGACCGCGAGGCAGCCGACGCGGTGCTGGACGAGATCAACGAACGCGCGGTGGAAGAGGCCCTGCAGATCCGCGAGCGCG
AGGGCGGCGAGGGCTCGGTCACCGTGCTGACCGCGGGCCCCGAGCGGGCCACCGAGGCGATCCGCAAGGCGCTGTCCATG
GGTGCCGACAAGGCCGTCCACCTCAAGGACGACGGCATGCACGGCTCCGACGTGGTGCAGACCGGCTGGGCGCTGGCGCG
CGCGCTGGGCACCATCGAGGGCACCGAGCTGGTGATCGCCGGAAACGAATCCACCGACGGCACGGGCGGGGCGGTGCCCG
CCATCATCGCCGAGTACCTGGGCCTGCCACAGCTCACCCACCTGCGCAAGCTGTCCATCGAGAACGGCAAGGTCACCGGC
GAGCGGGAGACCGACGACGGGGTCTTCAACCTGGAGGCCACGCTGCCCGCGGTGGTGAGCGTCACCGAGAAGATCAACGA
GCCGCGCTTCCCCTCGTTCAAGGGCATCATGGCCGCCAAGAAGAAAGAGGTCACGGTGCTGACGCTGGCCGAGATCGGGG
TCGAGCCCGACGAGGTCGGGCTGGCCAACGCCGGTTCCAGCGTGCTGTCCTCGACGCCGAAGCCGCCGAAGACCGCGGGT
GAGAAGGTCACCGACGAGGGCGAGGGCGGCAACCAGATCGCCCAGTACCTGGTCGGCCAGAAGATCATCTAA

Upstream 100 bases:

>100_bases
AAGTTACCGGGTAGTAACACCGCTGTGCGTTGCGAAAAACGCGTACCGAGGTCTGGCAGTCGATCGCTGCGGACCCCTTC
GAGGAGGACGAACCACACTC

Downstream 100 bases:

>100_bases
GACGAGCCCACATCCCACAGACGAGAAGAGCGATAAACCATGGCTGAAGTATTGGTGCTCGTGGAGCACGCCGAGGGTGC
ACTGAAGAAGGTCACCTCCG

Product: hypothetical protein

Products: NA

Alternate protein names: Beta-ETF; Electron transfer flavoprotein small subunit; ETFSS [H]

Number of amino acids: Translated: 263; Mature: 262

Protein sequence:

>263_residues
MTNIVVLIKQVPDTWSERKLTDGDWTLDREAADAVLDEINERAVEEALQIREREGGEGSVTVLTAGPERATEAIRKALSM
GADKAVHLKDDGMHGSDVVQTGWALARALGTIEGTELVIAGNESTDGTGGAVPAIIAEYLGLPQLTHLRKLSIENGKVTG
ERETDDGVFNLEATLPAVVSVTEKINEPRFPSFKGIMAAKKKEVTVLTLAEIGVEPDEVGLANAGSSVLSSTPKPPKTAG
EKVTDEGEGGNQIAQYLVGQKII

Sequences:

>Translated_263_residues
MTNIVVLIKQVPDTWSERKLTDGDWTLDREAADAVLDEINERAVEEALQIREREGGEGSVTVLTAGPERATEAIRKALSM
GADKAVHLKDDGMHGSDVVQTGWALARALGTIEGTELVIAGNESTDGTGGAVPAIIAEYLGLPQLTHLRKLSIENGKVTG
ERETDDGVFNLEATLPAVVSVTEKINEPRFPSFKGIMAAKKKEVTVLTLAEIGVEPDEVGLANAGSSVLSSTPKPPKTAG
EKVTDEGEGGNQIAQYLVGQKII
>Mature_262_residues
TNIVVLIKQVPDTWSERKLTDGDWTLDREAADAVLDEINERAVEEALQIREREGGEGSVTVLTAGPERATEAIRKALSMG
ADKAVHLKDDGMHGSDVVQTGWALARALGTIEGTELVIAGNESTDGTGGAVPAIIAEYLGLPQLTHLRKLSIENGKVTGE
RETDDGVFNLEATLPAVVSVTEKINEPRFPSFKGIMAAKKKEVTVLTLAEIGVEPDEVGLANAGSSVLSSTPKPPKTAGE
KVTDEGEGGNQIAQYLVGQKII

Specific function: The electron transfer flavoprotein serves as a specific electron acceptor for other dehydrogenases. It transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase) [H]

COG id: COG2086

COG function: function code C; Electron transfer flavoprotein, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF beta-subunit/fixA family [H]

Homologues:

Organism=Homo sapiens, GI4503609, Length=210, Percent_Identity=32.8571428571429, Blast_Score=103, Evalue=1e-22,
Organism=Homo sapiens, GI62420877, Length=210, Percent_Identity=32.8571428571429, Blast_Score=103, Evalue=2e-22,
Organism=Escherichia coli, GI87081682, Length=256, Percent_Identity=30.46875, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI2367123, Length=203, Percent_Identity=30.0492610837438, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI87082158, Length=165, Percent_Identity=28.4848484848485, Blast_Score=68, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI25141345, Length=219, Percent_Identity=27.8538812785388, Blast_Score=75, Evalue=3e-14,
Organism=Saccharomyces cerevisiae, GI6321646, Length=190, Percent_Identity=29.4736842105263, Blast_Score=78, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24651147, Length=247, Percent_Identity=28.3400809716599, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24651145, Length=247, Percent_Identity=28.3400809716599, Blast_Score=83, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000049
- InterPro:   IPR014730
- InterPro:   IPR012255
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF [H]

EC number: NA

Molecular weight: Translated: 27848; Mature: 27716

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: PS01065 ETF_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNIVVLIKQVPDTWSERKLTDGDWTLDREAADAVLDEINERAVEEALQIREREGGEGSV
CCCEEEEEECCCCCHHHCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE
TVLTAGPERATEAIRKALSMGADKAVHLKDDGMHGSDVVQTGWALARALGTIEGTELVIA
EEEECCHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEE
GNESTDGTGGAVPAIIAEYLGLPQLTHLRKLSIENGKVTGERETDDGVFNLEATLPAVVS
CCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEHHHHHHHHH
VTEKINEPRFPSFKGIMAAKKKEVTVLTLAEIGVEPDEVGLANAGSSVLSSTPKPPKTAG
HHHHHCCCCCCCHHHHHHHCCCCEEEEEHHHHCCCHHHCCCCCCCCHHHHCCCCCCCCCC
EKVTDEGEGGNQIAQYLVGQKII
CCCCCCCCCHHHHHHHHHCCCCC
>Mature Secondary Structure 
TNIVVLIKQVPDTWSERKLTDGDWTLDREAADAVLDEINERAVEEALQIREREGGEGSV
CCEEEEEECCCCCHHHCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE
TVLTAGPERATEAIRKALSMGADKAVHLKDDGMHGSDVVQTGWALARALGTIEGTELVIA
EEEECCHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEE
GNESTDGTGGAVPAIIAEYLGLPQLTHLRKLSIENGKVTGERETDDGVFNLEATLPAVVS
CCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEHHHHHHHHH
VTEKINEPRFPSFKGIMAAKKKEVTVLTLAEIGVEPDEVGLANAGSSVLSSTPKPPKTAG
HHHHHCCCCCCCHHHHHHHCCCCEEEEEHHHHCCCHHHCCCCCCCCHHHHCCCCCCCCCC
EKVTDEGEGGNQIAQYLVGQKII
CCCCCCCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]