| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409157
Identifier: 41409157
GI number: 41409157
Start: 3403877
End: 3404722
Strand: Reverse
Name: 41409157
Synonym: MAP3059c
Alternate gene names: NA
Gene position: 3404722-3403877 (Counterclockwise)
Preceding gene: 41409158
Following gene: 41409156
Centisome position: 70.49
GC content: 73.4
Gene sequence:
>846_bases ATGAGCATTGCTTCGGTCCTCATACCCAGCGACCACCCCAGCGGTTCGGCGACCGGGTCGTCGGCCGCGCCGCGCTACTC CCTGCTGCTGTCGGCCGACCCCGTCATGATCGAGGCGGCGCAGCGGCTCCGCTACGAGGTGTTCACCAGCACGCCGGGCT TCGCCCTGCCGTCGGCCGACGGGTCCGGCCGCGACGTCGACCGGTTCGACGAATTCTGCGACCACCTGCTGGTCCGCGAC GACGACACCGGCGAGCTGGTGGGCTGCTACCGGATGCTGGCGCCCGCGGGCGCGATCGCGGCCGGCGGGCTCTACACCGC CACCGAGTTCGACATCCGCGCCTTCGACCCGCTGCGGCCGTCGCTGGTGGAGATGGGCCGCGCCGTGGTGCGCGACGGGC ACCGTAACGGCGGCGTGGTGCTGCTGATGTGGGCGGGCATCCTGGCCTACCTGGACCGCTACGGCTACGACTACGTGACC GGATGCGTGTCGGTGCCCATCGGGGACGCCGATGATGCGCCCCCGGGCAGCCGGCTGCGGGGCGTGCGTGACTTCGTCGT CAGCCGCCACGGCGCGCCGGCGCGGTACCGGGTGCGGCCGCACCGGCCGGTGGTCGTCGACGGCACCGCCCTGGACGACA TCCCGCCGCCCGCGCGGCCGTCGGTTCCGGCGCTGATGCGCGGCTACCTGCGGTTGGGCGCACAGGTGTGCGGCGAGCCC GCACACGACCCCGACTTCGGGGTCGGCGACTTCTGCGTGCTGCTGGGCAAGCAGGACGCCGACACCCGGTACCTGAAGCG ACTGAGATCGGTGTCGGCGGCCGCGGAACTGGCGGGCGGCCGGTGA
Upstream 100 bases:
>100_bases ACGGCGGTCACGCTTTTCGCCACAGTTCGTCATCTGACGTGCACCGACACGTCACAGCGTCGATGCCGACTCGCTCATCG GCTGCGCCACGTTGGGTGCC
Downstream 100 bases:
>100_bases TGCAGGCCCCCGCGGGCGGCGGGCACTCCTGGCTGCCGCGGGCCTCGTGTGACGCCCGCTGCGTGGCCGCCGGCCGGCCG GCGGCCGAGCGGCGGCTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: Hemolysin; Hemolysin-Like Protein; Ornithine-Acyl(Acyl Carrier Protein) N-Acyltransferase; Phospholipid/Glycerol Acyltransferase; Ornithine-Acyl(Acyl Carrier Protein) N- Acyltransferase; Acyl-CoA N-Acyltransferase; Phosphohistidine Phosphatase SixA; Ornithine-Acyl N-Acyltransferase; Acyltransferase Domain Protein; Hemolysin Protein
Number of amino acids: Translated: 281; Mature: 280
Protein sequence:
>281_residues MSIASVLIPSDHPSGSATGSSAAPRYSLLLSADPVMIEAAQRLRYEVFTSTPGFALPSADGSGRDVDRFDEFCDHLLVRD DDTGELVGCYRMLAPAGAIAAGGLYTATEFDIRAFDPLRPSLVEMGRAVVRDGHRNGGVVLLMWAGILAYLDRYGYDYVT GCVSVPIGDADDAPPGSRLRGVRDFVVSRHGAPARYRVRPHRPVVVDGTALDDIPPPARPSVPALMRGYLRLGAQVCGEP AHDPDFGVGDFCVLLGKQDADTRYLKRLRSVSAAAELAGGR
Sequences:
>Translated_281_residues MSIASVLIPSDHPSGSATGSSAAPRYSLLLSADPVMIEAAQRLRYEVFTSTPGFALPSADGSGRDVDRFDEFCDHLLVRD DDTGELVGCYRMLAPAGAIAAGGLYTATEFDIRAFDPLRPSLVEMGRAVVRDGHRNGGVVLLMWAGILAYLDRYGYDYVT GCVSVPIGDADDAPPGSRLRGVRDFVVSRHGAPARYRVRPHRPVVVDGTALDDIPPPARPSVPALMRGYLRLGAQVCGEP AHDPDFGVGDFCVLLGKQDADTRYLKRLRSVSAAAELAGGR >Mature_280_residues SIASVLIPSDHPSGSATGSSAAPRYSLLLSADPVMIEAAQRLRYEVFTSTPGFALPSADGSGRDVDRFDEFCDHLLVRDD DTGELVGCYRMLAPAGAIAAGGLYTATEFDIRAFDPLRPSLVEMGRAVVRDGHRNGGVVLLMWAGILAYLDRYGYDYVTG CVSVPIGDADDAPPGSRLRGVRDFVVSRHGAPARYRVRPHRPVVVDGTALDDIPPPARPSVPALMRGYLRLGAQVCGEPA HDPDFGVGDFCVLLGKQDADTRYLKRLRSVSAAAELAGGR
Specific function: Unknown
COG id: COG3176
COG function: function code R; Putative hemolysin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30014; Mature: 29883
Theoretical pI: Translated: 5.95; Mature: 5.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIASVLIPSDHPSGSATGSSAAPRYSLLLSADPVMIEAAQRLRYEVFTSTPGFALPSAD CCCCEEEECCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHEEECCCCCCCCCCC GSGRDVDRFDEFCDHLLVRDDDTGELVGCYRMLAPAGAIAAGGLYTATEFDIRAFDPLRP CCCCCHHHHHHHHHHHEECCCCCCHHHHHHHHHHCCCHHHCCCCEEEEECCEEECCCCCH SLVEMGRAVVRDGHRNGGVVLLMWAGILAYLDRYGYDYVTGCVSVPIGDADDAPPGSRLR HHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHCHHHHHHEEECCCCCCCCCCCCHHHH GVRDFVVSRHGAPARYRVRPHRPVVVDGTALDDIPPPARPSVPALMRGYLRLGAQVCGEP HHHHHHHHCCCCCCEEEECCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC AHDPDFGVGDFCVLLGKQDADTRYLKRLRSVSAAAELAGGR CCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SIASVLIPSDHPSGSATGSSAAPRYSLLLSADPVMIEAAQRLRYEVFTSTPGFALPSAD CCCEEEECCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHEEECCCCCCCCCCC GSGRDVDRFDEFCDHLLVRDDDTGELVGCYRMLAPAGAIAAGGLYTATEFDIRAFDPLRP CCCCCHHHHHHHHHHHEECCCCCCHHHHHHHHHHCCCHHHCCCCEEEEECCEEECCCCCH SLVEMGRAVVRDGHRNGGVVLLMWAGILAYLDRYGYDYVTGCVSVPIGDADDAPPGSRLR HHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHCHHHHHHEEECCCCCCCCCCCCHHHH GVRDFVVSRHGAPARYRVRPHRPVVVDGTALDDIPPPARPSVPALMRGYLRLGAQVCGEP HHHHHHHHCCCCCCEEEECCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC AHDPDFGVGDFCVLLGKQDADTRYLKRLRSVSAAAELAGGR CCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA