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The map label for this gene is ligA

Identifier: 41409152

GI number: 41409152

Start: 3396720

End: 3398762

Strand: Reverse

Name: ligA

Synonym: MAP3054c

Alternate gene names: NA

Gene position: 3398762-3396720 (Counterclockwise)

Preceding gene: 41409153

Following gene: 41409151

Centisome position: 70.37

GC content: 70.83

Gene sequence:

>2043_bases
GTGGCAGGAGCTGGCCGAAACGGTCCGCGAACACCAGTTCCGCTACTACATCAAGGACGCGCCGATCATCTCGGACGCCG
AGTTCGACGCGCTGTTCAACGAGCTGCTCGCCCTGGAGGAGCGCCACCCCGAGCTGCGGGTGGCCGATTCGCCCACGCAG
CTGGTCGGCGGGGCGGGTTTCGCCACCGACTTCGCCGAGGCGGCGCACCTGGAGCGGATGCTGAGCCTCGACGACGTCTT
CGACACCGACGAGCTAATCGCCTGGAGCAATCGCGTCGAGAACGAGATCGGCAAGGACCCGCACTACCTGTGCGAGCTCA
AGATCGACGGGGTGGCCCTGTCGCTGGTCTACCGCGACGGCCGGCTGGAACGCGCCGCCACCCGGGGCGACGGCCGGGTC
GGCGAGGACGTGACGCTCAACGCACGCACCATCGACGACGTGCCCGAACGCCTCTCGCCCAGCGACGACTTCCCGGTTCC
GGCGCTGCTCGAGGTGCGCGGCGAGGTGTTCTTCCTGCTCGCCGACTTCGAGGCGCTCAACGCCAGCCTGGTCGAAGACG
GCAAGGCGCCGTTCGCCAATCCGCGCAACAGCGCGGCCGGGTCGCTGCGCCAGAAGAACCCGGCCGTCACCGCGCGGCGC
AAGCTGCGGATGATCTGCCACGGCATCGGCCGCACCGAGGGGTTCTCGCCGAAAACCCAGCACGAGGCCTACACCGCGCT
GAGCGTGTGGGGGCTGCCGGTGGCCGAACAGACCGCGCGGGTGCGCGGGCTGGCCGCGGTGCAGGAGCGGATCGGCTACT
GGGGCGAGCACCGCTACGACCTGCAACACGAGATCGACGGTGTGGTGGTCAAAGTCGACGACGTCGCGTTGCAGCGCCGG
CTCGGCGCCACCTCGCGCGCGCCGCGGTGGGCGGTCGCCTACAAGTACCCGCCCCAGGAGGCGCAGACCAAGCTCCTCGA
CATCCGCGTCAACGTCGGGCGCACCGGGCGCGTCACCCCGTTTGCGTTCATGACCCCGGTCAAGGTGGCCGGGTCGACGG
TGGGGCTGGCCACCCTGCACAACGCCGCCGAGGTCAAGCGCAAGGGCGTGCTGATCGGCGACACCGTGATGATCCGCAAG
GCCGGCGACGTGATCCCCGAGGTGCTGGGCCCGGTCGTCGACCTGCGCGACGGCACCGAACGCGAATTCGTCATGCCCAC
AACGTGTCCCGAGTGCGGCACCCCGCTGGCGCCGGCCAAGGAGGGCGACGCCGACATCCGCTGCCCCAACGCCCGGTCCT
GCCCGGCGCAGCTGCGAGAGCGGGTGTTTCACGTCGCCGGCCGCGGCGCACTCGACATCGAGGGGCTGGGCTACGAGGCG
GCCACCGCGCTGCTCAAGGCCGGGGTGATCGCCGACGAGGGCGACTTGTTCGCGCTCACCGAGGACGACCTGCTGCGCAC
CGAGCTGTTCCGGACCAAGGCCGGCACGTTGTCCGCGAACGGCACACGGCTGCTGCAGAACCTGCAGAAGGCGAAAAAGG
TTGCGCTGTGGCGTGTTTTGGTGGCGCTGTCGATCCGGCACGTGGGGCCGACGGCGGCGCGCGCCCTGGCGACCGAGTTC
GGCGATCTGGACTCGATCATGTCGGCGTCCACCGAGCGGCTCGCCGCGGTGGAGGGGGTCGGCCCGACGATCGCGGCGGC
GCTCACCGAATGGTTCACCGTCGACTGGCACCGCGCGATCGTGGACAAGTGGCGGGCCGCCGGCGTGCGGATGGCCGACG
AGCGCGACGCCAGCGTGCCGCGCACGCTGGAGGGGCTGACGGTGGTGGTCACCGGGTCGCTGGCCGGTTTCTCCCGCGAC
GACGCCAAGGAGGCGATCCTGGCGCGCGGCGGCAAGGCCGCCGGTTCGGTGTCGAAGAAGACCGACTACGTGGTGGCCGG
CGATTCGCCGGGCTCCAAGTACGACAAGGCGGTCGAGCTCGGCGTGCCCATCCTGGACGAGGACGGCTTCCGCAAGCTGC
TGGCCGAGGGCCCGCCCGAAACCCCGGCGGACTGAGCCGATGA

Upstream 100 bases:

>100_bases
CAACCCGCAAGGTTGCCGGGTTTTGCGTCGGTCGGCTCGGATAGCCTGCCAAGGTGAGCTCGGCAGAGGCTGATTCGGTA
CCGCCCGAGGTGCGGCGGCA

Downstream 100 bases:

>100_bases
GCGGCAACTACGGTGACTCCACCCGTAGCCTCAAAGCTGTTGATCCTCAAGCTGTTTCGGGCCAACCGGTGGCGCCGCAG
CCGGTGCTGGCCGCCACCTA

Product: LigA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 680; Mature: 679

Protein sequence:

>680_residues
MAGAGRNGPRTPVPLLHQGRADHLGRRVRRAVQRAARPGGAPPRAAGGRFAHAAGRRGGFRHRLRRGGAPGADAEPRRRL
RHRRANRLEQSRRERDRQGPALPVRAQDRRGGPVAGLPRRPAGTRRHPGRRPGRRGRDAQRTHHRRRARTPLAQRRLPGS
GAARGARRGVLPARRLRGAQRQPGRRRQGAVRQSAQQRGRVAAPEEPGRHRAAQAADDLPRHRPHRGVLAENPARGLHRA
ERVGAAGGRTDRAGARAGRGAGADRLLGRAPLRPATRDRRCGGQSRRRRVAAPARRHLARAAVGGRLQVPAPGGADQAPR
HPRQRRAHRARHPVCVHDPGQGGRVDGGAGHPAQRRRGQAQGRADRRHRDDPQGRRRDPRGAGPGRRPARRHRTRIRHAH
NVSRVRHPAGAGQGGRRRHPLPQRPVLPGAAARAGVSRRRPRRTRHRGAGLRGGHRAAQGRGDRRRGRLVRAHRGRPAAH
RAVPDQGRHVVRERHTAAAEPAEGEKGCAVACFGGAVDPARGADGGARPGDRVRRSGLDHVGVHRAARRGGGGRPDDRGG
AHRMVHRRLAPRDRGQVAGRRRADGRRARRQRAAHAGGADGGGHRVAGRFLPRRRQGGDPGARRQGRRFGVEEDRLRGGR
RFAGLQVRQGGRARRAHPGRGRLPQAAGRGPARNPGGLSR

Sequences:

>Translated_680_residues
MAGAGRNGPRTPVPLLHQGRADHLGRRVRRAVQRAARPGGAPPRAAGGRFAHAAGRRGGFRHRLRRGGAPGADAEPRRRL
RHRRANRLEQSRRERDRQGPALPVRAQDRRGGPVAGLPRRPAGTRRHPGRRPGRRGRDAQRTHHRRRARTPLAQRRLPGS
GAARGARRGVLPARRLRGAQRQPGRRRQGAVRQSAQQRGRVAAPEEPGRHRAAQAADDLPRHRPHRGVLAENPARGLHRA
ERVGAAGGRTDRAGARAGRGAGADRLLGRAPLRPATRDRRCGGQSRRRRVAAPARRHLARAAVGGRLQVPAPGGADQAPR
HPRQRRAHRARHPVCVHDPGQGGRVDGGAGHPAQRRRGQAQGRADRRHRDDPQGRRRDPRGAGPGRRPARRHRTRIRHAH
NVSRVRHPAGAGQGGRRRHPLPQRPVLPGAAARAGVSRRRPRRTRHRGAGLRGGHRAAQGRGDRRRGRLVRAHRGRPAAH
RAVPDQGRHVVRERHTAAAEPAEGEKGCAVACFGGAVDPARGADGGARPGDRVRRSGLDHVGVHRAARRGGGGRPDDRGG
AHRMVHRRLAPRDRGQVAGRRRADGRRARRQRAAHAGGADGGGHRVAGRFLPRRRQGGDPGARRQGRRFGVEEDRLRGGR
RFAGLQVRQGGRARRAHPGRGRLPQAAGRGPARNPGGLSR
>Mature_679_residues
AGAGRNGPRTPVPLLHQGRADHLGRRVRRAVQRAARPGGAPPRAAGGRFAHAAGRRGGFRHRLRRGGAPGADAEPRRRLR
HRRANRLEQSRRERDRQGPALPVRAQDRRGGPVAGLPRRPAGTRRHPGRRPGRRGRDAQRTHHRRRARTPLAQRRLPGSG
AARGARRGVLPARRLRGAQRQPGRRRQGAVRQSAQQRGRVAAPEEPGRHRAAQAADDLPRHRPHRGVLAENPARGLHRAE
RVGAAGGRTDRAGARAGRGAGADRLLGRAPLRPATRDRRCGGQSRRRRVAAPARRHLARAAVGGRLQVPAPGGADQAPRH
PRQRRAHRARHPVCVHDPGQGGRVDGGAGHPAQRRRGQAQGRADRRHRDDPQGRRRDPRGAGPGRRPARRHRTRIRHAHN
VSRVRHPAGAGQGGRRRHPLPQRPVLPGAAARAGVSRRRPRRTRHRGAGLRGGHRAAQGRGDRRRGRLVRAHRGRPAAHR
AVPDQGRHVVRERHTAAAEPAEGEKGCAVACFGGAVDPARGADGGARPGDRVRRSGLDHVGVHRAARRGGGGRPDDRGGA
HRMVHRRLAPRDRGQVAGRRRADGRRARRQRAAHAGGADGGGHRVAGRFLPRRRQGGDPGARRQGRRFGVEEDRLRGGRR
FAGLQVRQGGRARRAHPGRGRLPQAAGRGPARNPGGLSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 74005; Mature: 73874

Theoretical pI: Translated: 12.95; Mature: 12.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.1 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGAGRNGPRTPVPLLHQGRADHLGRRVRRAVQRAARPGGAPPRAAGGRFAHAAGRRGGF
CCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCHH
RHRLRRGGAPGADAEPRRRLRHRRANRLEQSRRERDRQGPALPVRAQDRRGGPVAGLPRR
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
PAGTRRHPGRRPGRRGRDAQRTHHRRRARTPLAQRRLPGSGAARGARRGVLPARRLRGAQ
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHCCCHHHHHCCCC
RQPGRRRQGAVRQSAQQRGRVAAPEEPGRHRAAQAADDLPRHRPHRGVLAENPARGLHRA
CCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
ERVGAAGGRTDRAGARAGRGAGADRLLGRAPLRPATRDRRCGGQSRRRRVAAPARRHLAR
HHHCCCCCCCCHHHHCCCCCCCHHHHHCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHH
AAVGGRLQVPAPGGADQAPRHPRQRRAHRARHPVCVHDPGQGGRVDGGAGHPAQRRRGQA
HHCCCEEECCCCCCCCCCCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCCHHHHHHCHH
QGRADRRHRDDPQGRRRDPRGAGPGRRPARRHRTRIRHAHNVSRVRHPAGAGQGGRRRHP
HCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
LPQRPVLPGAAARAGVSRRRPRRTRHRGAGLRGGHRAAQGRGDRRRGRLVRAHRGRPAAH
CCCCCCCCCHHHHHHHHHCCCHHHHHHCCCCCCCCHHHCCCCHHHHCCHHHHHCCCCHHH
RAVPDQGRHVVRERHTAAAEPAEGEKGCAVACFGGAVDPARGADGGARPGDRVRRSGLDH
HCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHCCCCH
VGVHRAARRGGGGRPDDRGGAHRMVHRRLAPRDRGQVAGRRRADGRRARRQRAAHAGGAD
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHCCCCC
GGGHRVAGRFLPRRRQGGDPGARRQGRRFGVEEDRLRGGRRFAGLQVRQGGRARRAHPGR
CCCHHHHHHHCHHHHCCCCCCHHHHHCCCCCCHHHHCCCCHHCCEEECCCCCCCCCCCCC
GRLPQAAGRGPARNPGGLSR
CCCCHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
AGAGRNGPRTPVPLLHQGRADHLGRRVRRAVQRAARPGGAPPRAAGGRFAHAAGRRGGF
CCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCHH
RHRLRRGGAPGADAEPRRRLRHRRANRLEQSRRERDRQGPALPVRAQDRRGGPVAGLPRR
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
PAGTRRHPGRRPGRRGRDAQRTHHRRRARTPLAQRRLPGSGAARGARRGVLPARRLRGAQ
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHCCCHHHHHCCCC
RQPGRRRQGAVRQSAQQRGRVAAPEEPGRHRAAQAADDLPRHRPHRGVLAENPARGLHRA
CCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
ERVGAAGGRTDRAGARAGRGAGADRLLGRAPLRPATRDRRCGGQSRRRRVAAPARRHLAR
HHHCCCCCCCCHHHHCCCCCCCHHHHHCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHH
AAVGGRLQVPAPGGADQAPRHPRQRRAHRARHPVCVHDPGQGGRVDGGAGHPAQRRRGQA
HHCCCEEECCCCCCCCCCCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCCHHHHHHCHH
QGRADRRHRDDPQGRRRDPRGAGPGRRPARRHRTRIRHAHNVSRVRHPAGAGQGGRRRHP
HCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
LPQRPVLPGAAARAGVSRRRPRRTRHRGAGLRGGHRAAQGRGDRRRGRLVRAHRGRPAAH
CCCCCCCCCHHHHHHHHHCCCHHHHHHCCCCCCCCHHHCCCCHHHHCCHHHHHCCCCHHH
RAVPDQGRHVVRERHTAAAEPAEGEKGCAVACFGGAVDPARGADGGARPGDRVRRSGLDH
HCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHCCCCH
VGVHRAARRGGGGRPDDRGGAHRMVHRRLAPRDRGQVAGRRRADGRRARRQRAAHAGGAD
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHCCCCC
GGGHRVAGRFLPRRRQGGDPGARRQGRRFGVEEDRLRGGRRFAGLQVRQGGRARRAHPGR
CCCHHHHHHHCHHHHCCCCCCHHHHHCCCCCCHHHHCCCCHHCCEEECCCCCCCCCCCCC
GRLPQAAGRGPARNPGGLSR
CCCCHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA